3 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0005515 | protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
GO:0008478 | pyridoxal kinase activity | Catalysis of the reaction: ATP + pyridoxal = ADP + pyridoxal 5'-phosphate. |
GO:0009443 | pyridoxal 5'-phosphate salvage | Any process that generates pyridoxal 5'-phosphate, the active form of vitamin B6, from derivatives of it without de novo synthesis. |
41 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|cit:102609879 | 2 | 479 | + | 478 | none | 90.62 | 341 | 83.82 | 8e-158 | pyridoxal kinase-like |
blastp_kegg | lcl|pop:POPTR_0017s02980g | 1 | 479 | + | 479 | Gaps:12 | 90.48 | 336 | 84.87 | 2e-153 | hypothetical protein |
blastp_kegg | lcl|pper:PRUPE_ppa008165mg | 11 | 478 | + | 468 | Gaps:4 | 88.34 | 343 | 81.52 | 3e-151 | hypothetical protein |
blastp_kegg | lcl|fve:101304704 | 230 | 478 | + | 249 | none | 80.58 | 309 | 84.74 | 2e-149 | pyridoxal kinase-like |
blastp_kegg | lcl|pmum:103328612 | 11 | 478 | + | 468 | Gaps:4 | 88.34 | 343 | 80.53 | 2e-149 | pyridoxal kinase |
blastp_kegg | lcl|sly:101259693 | 230 | 479 | + | 250 | none | 73.75 | 339 | 84.00 | 1e-148 | pyridoxal kinase-like |
blastp_kegg | lcl|mtr:MTR_5g079730 | 24 | 479 | + | 456 | none | 82.00 | 350 | 82.58 | 2e-148 | Pyridoxal kinase |
blastp_kegg | lcl|brp:103863760 | 230 | 478 | + | 249 | none | 74.55 | 334 | 83.53 | 2e-147 | pyridoxal kinase |
blastp_kegg | lcl|pxb:103931649 | 1 | 478 | + | 478 | Gaps:6 | 89.74 | 351 | 76.83 | 2e-147 | pyridoxal kinase |
blastp_kegg | lcl|cmo:103496845 | 230 | 479 | + | 250 | none | 81.17 | 308 | 82.80 | 2e-147 | pyridoxal kinase |
blastp_pdb | 4eoh_B | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal Kinase |
blastp_pdb | 4eoh_A | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal Kinase |
blastp_pdb | 4en4_B | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_pdb | 4en4_A | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_pdb | 3keu_B | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_pdb | 3keu_A | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_pdb | 2yxu_B | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_pdb | 2yxu_A | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_pdb | 2yxt_B | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_pdb | 2yxt_A | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 8e-64 | mol:protein length:312 Pyridoxal kinase |
blastp_uniprot_sprot | sp|Q8W1X2|PDXK_ARATH | 230 | 479 | + | 250 | none | 80.91 | 309 | 82.00 | 4e-146 | Pyridoxal kinase OS Arabidopsis thaliana GN PK PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q8K183|PDXK_MOUSE | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.30 | 1e-63 | Pyridoxal kinase OS Mus musculus GN Pdxk PE 1 SV 1 |
blastp_uniprot_sprot | sp|O46560|PDXK_PIG | 230 | 475 | + | 246 | Gaps:17 | 81.06 | 322 | 44.06 | 3e-63 | Pyridoxal kinase OS Sus scrofa GN PDXK PE 1 SV 1 |
blastp_uniprot_sprot | sp|O00764|PDXK_HUMAN | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.68 | 3e-63 | Pyridoxal kinase OS Homo sapiens GN PDXK PE 1 SV 1 |
blastp_uniprot_sprot | sp|P82197|PDXK_SHEEP | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 43.30 | 5e-63 | Pyridoxal kinase OS Ovis aries GN PDXK PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q0II59|PDXK_BOVIN | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 42.91 | 1e-62 | Pyridoxal kinase OS Bos taurus GN PDXK PE 2 SV 1 |
blastp_uniprot_sprot | sp|O35331|PDXK_RAT | 230 | 475 | + | 246 | Gaps:15 | 83.65 | 312 | 42.53 | 3e-62 | Pyridoxal kinase OS Rattus norvegicus GN Pdxk PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q55EK9|PDXK_DICDI | 230 | 478 | + | 249 | Gaps:7 | 84.77 | 302 | 44.53 | 1e-55 | Pyridoxal kinase OS Dictyostelium discoideum GN pykA PE 1 SV 1 |
blastp_uniprot_sprot | sp|O01824|PDXK_CAEEL | 229 | 469 | + | 241 | Gaps:19 | 74.77 | 321 | 41.25 | 2e-48 | Putative pyridoxal kinase OS Caenorhabditis elegans GN F57C9.1 PE 3 SV 2 |
blastp_uniprot_sprot | sp|O14242|YELB_SCHPO | 230 | 475 | + | 246 | Gaps:27 | 83.17 | 309 | 36.58 | 9e-38 | Putative pyridoxal kinase C6F6.11c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC6F6.11c PE 3 SV 2 |
8 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
PANTHER | 229 | 477 | 249 | PTHR10534 | "KEGG:00750+2.7.1.35","MetaCyc:PWY-7204","MetaCyc:PWY-7282";signature_desc=PYRIDOXAL KINASE | none | IPR004625 |
SUPERFAMILY | 230 | 476 | 247 | SSF53613 | none | none | IPR029056 |
Gene3D | 230 | 477 | 248 | G3DSA:3.40.1190.20 | none | none | IPR029056 |
Pfam | 273 | 439 | 167 | PF08543 | none | Phosphomethylpyrimidine kinase | IPR013749 |
SUPERFAMILY | 64 | 101 | 38 | SSF81383 | none | none | IPR001810 |
SUPERFAMILY | 161 | 232 | 72 | SSF52047 | none | none | none |
TIGRFAM | 229 | 478 | 250 | TIGR00687 | "KEGG:00750+2.7.1.35","MetaCyc:PWY-7204","MetaCyc:PWY-7282" | pyridox_kin: pyridoxal kinase | IPR004625 |
Gene3D | 63 | 227 | 165 | G3DSA:3.80.10.10 | none | none | none |
14 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran2_2015_nEpis_3P | Qrob_Chr12 | 12 | s_1AOES6_1466 | s_1B0DDG_1094 | 28,97 | 28,55 | 30,1 | lod | 3.6 | 8.4 |
Bourran2_2014_nPriLBD*_3P | Qrob_Chr11 | 11 | v_12066_307 | s_1B15GJ_447 | 3,37 | 0,57 | 16,17 | lod | 3,4299 | 6,9 |
Bourran2_2014_nP_A4 | Qrob_Chr11 | 11 | s_1B58GB_1413 | s_1A5BYY_1671 | 11,15 | 0 | 42,38 | lod | 1,8913 | 4,5 |
Bourran2_2002_QTL16_peak_Bud_burst_A4 | Qrob_Chr11 | 11 | s_A9OIA_166 | s_1C6WBF_114 | 21,23 | 2,83 | 42,83 | lod | 5,1 | 7,2 |
Bourran2_2015_nSeqBC_3P | Qrob_Chr11 | 11 | s_1DG9PM_867 | s_1BZ083_1312 | 26,06 | 25,47 | 27,72 | lod | 3.6 | 7.1 |
Bourran2_2014_nP_3P | Qrob_Chr11 | 11 | v_11486_194 | s_1AT3E_2335 | 7,9 | 0,09 | 30,09 | lod | 2,3636 | 5 |
Bourran2_2014_nPriBD_3P | Qrob_Chr11 | 11 | v_11486_194 | s_1AT3E_2335 | 5,54 | 0,4 | 20,6 | lod | 2,6345 | 5,9 |
Bourran1_2003_QTL6_peak_Bud_burst_A4 | Qrob_Chr11 | 11 | v_12066_307 | s_1A9FKZ_348 | 3,59 | 0 | 20,89 | lod | 3,4 | 9,4 |
PM_1999_QTL17_peak_Bud_burst_3P | Qrob_Chr11 | 11 | s_1A9FKZ_348 | v_11486_883 | 4,8 | 0 | 24,8 | lod | 3,5 | 6,2 |
Bourran_2000_2002_QTL1_Delta.F | Qrob_Chr11 | 11 | v_AC14YL05_1355 | s_2F1WOG_696 | 10.96 | 3,25 | 16,39 | lod | 25.0121 | 0.2 |
Bourran_2000_2002_QTL5_Delta.F | Qrob_Chr11 | 11 | s_1BD29X_620 | s_2F1WOG_696 | 2.94 | 1,08 | 16,39 | lod | 5.936 | 0.05 |
Bourran2_2014_vEpiBC*_3P | Qrob_Chr11 | 11 | s_1A5GRX_415 | v_4456_500 | 9,37 | 0 | 19,27 | lod | 3,513 | 9,3 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL1_d13Cf | Qrob_Chr11 | 11 | s_1A9FKZ_348 | v_7268_36 | 13.33 | 3,98 | 19,87 | lod | 29.1377 | 0.18 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf | Qrob_Chr11 | 11 | s_1BD29X_620 | s_1A5BYY_1671 | 2.26 | 1,08 | 11,24 | lod | 5.8451 | 0.037 |