Protein : Qrob_P0273280.2 Q. robur
Protein Identifier  ? Qrob_P0273280.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K08911 - light-harvesting complex I chlorophyll a/b binding protein 5 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 264  
Kegg Orthology  K08911
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0009765 photosynthesis, light harvesting Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102613058 1 263 + 263 Gaps:2 100.00 265 81.13 1e-152 chlorophyll a-b binding protein P4 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa010039mg 1 263 + 263 Gaps:3 100.00 266 81.20 8e-151 hypothetical protein
blastp_kegg lcl|pmum:103320330 2 263 + 262 Gaps:2 99.25 266 81.06 3e-150 chlorophyll a-b binding protein P4 chloroplastic
blastp_kegg lcl|tcc:TCM_033843 1 263 + 263 Gaps:5 100.00 264 79.55 8e-148 Light-harvesting complex I protein Lhca5 isoform 1
blastp_kegg lcl|vvi:100255844 1 261 + 261 Gaps:2 99.62 264 77.57 4e-145 chlorophyll a-b binding protein 4 chloroplastic-like
blastp_kegg lcl|mdm:103455968 1 261 + 261 Gaps:6 99.62 260 77.99 2e-141 chlorophyll a-b binding protein P4 chloroplastic
blastp_kegg lcl|pop:POPTR_0014s02960g 1 263 + 263 Gaps:5 100.00 266 76.69 2e-141 chlorophyll A-B binding family protein
blastp_kegg lcl|pxb:103950058 1 261 + 261 Gaps:6 99.62 260 77.99 4e-141 chlorophyll a-b binding protein P4 chloroplastic-like
blastp_kegg lcl|rcu:RCOM_1590680 1 263 + 263 Gaps:6 100.00 269 73.61 2e-140 chlorophyll A/B binding protein putative
blastp_kegg lcl|gmx:100804934 1 263 + 263 Gaps:2 92.28 285 75.29 1e-135 chlorophyll a-b binding protein 7 chloroplastic-like
blastp_pdb 2wsf_4 58 261 + 204 Gaps:8 78.09 251 55.10 5e-64 mol:protein length:251 CHLOROPHYLL A-B BINDING PROTEIN P4 CHLOROPLA
blastp_pdb 2wse_4 58 261 + 204 Gaps:8 78.09 251 55.10 5e-64 mol:protein length:251 CHLOROPHYLL A-B BINDING PROTEIN P4 CHLOROPLA
blastp_pdb 2wsc_4 58 261 + 204 Gaps:8 78.09 251 55.10 5e-64 mol:protein length:251 CHLOROPHYLL A-B BINDING PROTEIN P4 CHLOROPLA
blastp_pdb 2wsf_2 46 254 + 209 Gaps:5 77.32 269 52.40 9e-63 mol:protein length:269 TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM
blastp_pdb 2wse_2 46 254 + 209 Gaps:5 77.32 269 52.40 9e-63 mol:protein length:269 TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM
blastp_pdb 2wsc_2 46 254 + 209 Gaps:5 77.32 269 52.40 9e-63 mol:protein length:269 TYPE II CHLOROPHYLL A/B BINDING PROTEIN FROM
blastp_pdb 2o01_2 65 251 + 187 Gaps:3 100.00 186 52.15 3e-57 mol:protein length:186 Type II chlorophyll a/b binding protein from
blastp_pdb 2wsf_3 44 258 + 215 Gaps:18 82.97 276 44.54 2e-55 mol:protein length:276 LHCA3
blastp_pdb 2wse_3 44 258 + 215 Gaps:18 82.97 276 44.54 2e-55 mol:protein length:276 LHCA3
blastp_pdb 2wsc_3 44 258 + 215 Gaps:18 82.97 276 44.54 2e-55 mol:protein length:276 LHCA3
blastp_uniprot_sprot sp|Q9SQL2|CB24_PEA 58 261 + 204 Gaps:7 78.17 252 55.33 7e-66 Chlorophyll a-b binding protein P4 chloroplastic OS Pisum sativum GN lhcA-P4 PE 1 SV 1
blastp_uniprot_sprot sp|P10708|CB12_SOLLC 41 259 + 219 Gaps:4 81.11 270 51.14 9e-66 Chlorophyll a-b binding protein 7 chloroplastic OS Solanum lycopersicum GN CAB7 PE 3 SV 1
blastp_uniprot_sprot sp|P27521|CA4_ARATH 37 258 + 222 Gaps:8 85.26 251 52.80 9e-66 Chlorophyll a-b binding protein 4 chloroplastic OS Arabidopsis thaliana GN LHCA4 PE 1 SV 1
blastp_uniprot_sprot sp|P13869|CB12_PETHY 39 259 + 221 Gaps:4 81.85 270 48.87 3e-64 Chlorophyll a-b binding protein chloroplastic OS Petunia hybrida PE 2 SV 1
blastp_uniprot_sprot sp|Q36718|CB120_HORVU 36 259 + 224 Gaps:9 93.07 231 46.51 6e-54 Chlorophyll a-b binding protein 1B-20 chloroplastic (Fragment) OS Hordeum vulgare GN LHC Ib-20 PE 1 SV 1
blastp_uniprot_sprot sp|P27522|CB13_SOLLC 46 258 + 213 Gaps:20 83.15 273 44.05 3e-53 Chlorophyll a-b binding protein 8 chloroplastic OS Solanum lycopersicum GN CAB8 PE 3 SV 1
blastp_uniprot_sprot sp|Q32904|CB23_PEA 39 258 + 220 Gaps:30 88.73 275 40.57 1e-52 Chlorophyll a-b binding protein 3 chloroplastic OS Pisum sativum GN lhca3 PE 1 SV 1
blastp_uniprot_sprot sp|P27524|CB4A_SOLLC 48 231 + 184 Gaps:34 78.12 256 46.00 5e-38 Chlorophyll a-b binding protein CP24 10A chloroplastic OS Solanum lycopersicum GN CAP10A PE 3 SV 1
blastp_uniprot_sprot sp|P27517|CB2_DUNTE 63 249 + 187 Gaps:30 74.70 253 46.03 2e-37 Chlorophyll a-b binding protein of LHCII type I chloroplastic OS Dunaliella tertiolecta PE 2 SV 1
blastp_uniprot_sprot sp|P12360|CB11_SOLLC 46 262 + 217 Gaps:27 83.74 246 39.81 2e-37 Chlorophyll a-b binding protein 6A chloroplastic OS Solanum lycopersicum GN CAB6A PE 2 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 49 260 212 SSF103511 none none IPR023329
Gene3D 56 257 202 G3DSA:1.10.3460.10 none none IPR023329
PANTHER 55 261 207 PTHR21649 none none IPR001344
Pfam 64 231 168 PF00504 none Chlorophyll A-B binding protein IPR022796

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 103   Mitochondrion 5 0.095 0.509 NON-PLANT 103