Protein : Qrob_P0272850.2 Q. robur
Protein Identifier  ? Qrob_P0272850.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=5) K19042 - E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27] Gene Prediction Quality  validated
Protein length 

Sequence

Length: 350  
Kegg Orthology  K19042
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0031347 regulation of defense response Any process that modulates the frequency, rate or extent of a defense response.

21 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cic:CICLE_v10001290mg 5 349 + 345 Gaps:10 79.95 419 83.58 0.0 hypothetical protein
blastp_kegg lcl|cit:102631343 5 349 + 345 Gaps:10 99.11 338 82.99 0.0 probable BOI-related E3 ubiquitin-protein ligase 2-like
blastp_kegg lcl|pmum:103320348 29 349 + 321 Gaps:2 91.40 349 83.39 0.0 probable BOI-related E3 ubiquitin-protein ligase 2
blastp_kegg lcl|gmx:100783373 3 349 + 347 Gaps:7 99.72 351 81.43 0.0 uncharacterized LOC100783373
blastp_kegg lcl|pper:PRUPE_ppa008290mg 3 349 + 347 Gaps:10 99.70 338 81.31 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0014s02680g 30 349 + 320 Gaps:4 93.77 337 82.91 0.0 S-RIBONUCLEASE BINDING protein 1
blastp_kegg lcl|pvu:PHAVU_001G023100g 3 349 + 347 Gaps:13 99.71 339 81.66 0.0 hypothetical protein
blastp_kegg lcl|gmx:100811918 29 349 + 321 Gaps:4 93.86 342 82.55 0.0 probable BOI-related E3 ubiquitin-protein ligase 3-like
blastp_kegg lcl|mtr:MTR_1g019250 3 349 + 347 Gaps:8 99.71 340 79.65 0.0 Baculoviral IAP repeat-containing protein
blastp_kegg lcl|tcc:TCM_033814 29 349 + 321 Gaps:3 93.88 343 83.85 0.0 S-ribonuclease binding protein 1
blastp_pdb 3eb6_A 297 340 + 44 none 59.46 74 40.91 6e-07 mol:protein length:74 Baculoviral IAP repeat-containing protein 3
blastp_pdb 3eb5_A 297 340 + 44 none 59.46 74 40.91 6e-07 mol:protein length:74 Baculoviral IAP repeat-containing protein 3
blastp_uniprot_sprot sp|Q9LDD1|BRG3_ARATH 149 349 + 201 Gaps:20 62.99 335 31.75 3e-28 Probable BOI-related E3 ubiquitin-protein ligase 3 OS Arabidopsis thaliana GN BRG3 PE 1 SV 1
blastp_uniprot_sprot sp|F4IDI6|BRG2_ARATH 148 349 + 202 Gaps:20 62.01 358 32.88 3e-26 Probable BOI-related E3 ubiquitin-protein ligase 2 OS Arabidopsis thaliana GN BRG2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9FHE4|BRG1_ARATH 150 349 + 200 Gaps:37 67.01 294 34.52 3e-20 BOI-related E3 ubiquitin-protein ligase 1 OS Arabidopsis thaliana GN BRG1 PE 1 SV 1
blastp_uniprot_sprot sp|O81851|BOI_ARATH 65 337 + 273 Gaps:44 82.57 304 33.86 5e-18 E3 ubiquitin-protein ligase BOI OS Arabidopsis thaliana GN BOI PE 1 SV 1
blastp_uniprot_sprot sp|A9JTP3|BIRC7_XENTR 297 349 + 53 none 14.52 365 39.62 2e-06 Baculoviral IAP repeat-containing protein 7 OS Xenopus tropicalis GN birc7 PE 2 SV 1
blastp_uniprot_sprot sp|Q8JHV9|BIR7A_XENLA 297 349 + 53 none 13.22 401 39.62 3e-06 Baculoviral IAP repeat-containing protein 7-A OS Xenopus laevis GN birc7-a PE 1 SV 1
blastp_uniprot_sprot sp|A9ULZ2|BIR7B_XENLA 297 349 + 53 none 15.36 345 39.62 3e-06 Baculoviral IAP repeat-containing protein 7-B OS Xenopus laevis GN birc7-b PE 2 SV 2
rpsblast_cdd gnl|CDD|206091 299 340 + 42 Gaps:3 91.84 49 37.78 8e-08 pfam13920 zf-C3HC4_3 Zinc finger C3HC4 type (RING finger).
rpsblast_kog gnl|CDD|36316 151 349 + 199 Gaps:16 95.17 207 40.10 3e-43 KOG1100 KOG1100 KOG1100 Predicted E3 ubiquitin ligase [Posttranslational modification protein turnover chaperones].

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Coils 198 240 43 Coil none none none
Gene3D 296 340 45 G3DSA:3.30.40.10 none none IPR013083
ProSiteProfiles 303 338 36 PS50089 none Zinc finger RING-type profile. IPR001841
PANTHER 149 349 201 PTHR10044:SF87 none none none
Pfam 302 340 39 PF13920 none Zinc finger, C3HC4 type (RING finger) none
PIRSF 2 349 348 PIRSF036836 "UniPathway:UPA00144" none IPR017066
PANTHER 149 349 201 PTHR10044 none none none

0 Localization

11 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting