Protein : Qrob_P0270370.2 Q. robur
Protein Identifier  ? Qrob_P0270370.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) 2.7.4.1 - Polyphosphate kinase. Code Enzyme  EC:2.7.4.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 758  
Kegg Orthology  K05577
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0008137 NADH dehydrogenase (ubiquinone) activity Catalysis of the reaction: NADH + H+ + ubiquinone = NAD+ + ubiquinol.
GO:0042773 ATP synthesis coupled electron transport The transfer of electrons through a series of electron donors and acceptors, generating energy that is ultimately used for synthesis of ATP.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:10251579 1 748 + 748 Gaps:3 99.73 747 80.94 0.0 ndhF FvH4_C0101 NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|pmum:18668087 1 748 + 748 Gaps:3 100.00 745 80.81 0.0 ndhF CP95_p018 NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|pper:PrpeC_p069 1 742 + 742 Gaps:3 99.60 742 81.19 0.0 ndhF NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|rcu:RCOM_ORF00102 1 748 + 748 Gaps:7 99.73 749 78.71 0.0 ndhF NADH dehydrogenase subunit 5
blastp_kegg lcl|pmum:103323521 1 710 + 710 Gaps:3 100.00 707 81.19 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic
blastp_kegg lcl|csv:3429258 1 747 + 747 Gaps:6 99.60 748 78.93 0.0 ndhF ndh5 CsCp132 NADH dehydrogenase subunit 5
blastp_kegg lcl|sot:4099901 1 744 + 744 Gaps:14 99.05 739 78.96 0.0 ndhF ndh5 SotuCp071 NADH dehydrogenase subunit 5
blastp_kegg lcl|tcc:ThcaC_p077 1 747 + 747 Gaps:12 99.73 743 79.76 0.0 ndhF NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|sly:3950404 1 744 + 744 Gaps:14 99.32 737 78.55 0.0 ndhF LyesC2p020 NADH-plastoquinone oxidoreductase subunit 5
blastp_kegg lcl|vvi:4025035 1 750 + 750 Gaps:12 99.87 749 78.61 0.0 ndhF ndh5 ViviCp071 NADH dehydrogenase subunit 5
blastp_pdb 3rko_B 71 472 + 402 Gaps:13 64.11 613 44.02 2e-94 mol:protein length:613 NADH-QUINONE OXIDOREDUCTASE SUBUNIT L
blastp_pdb 3rko_L 71 472 + 402 Gaps:13 64.11 613 44.02 2e-94 mol:protein length:613 NADH-QUINONE OXIDOREDUCTASE SUBUNIT L
blastp_pdb 3rko_C 90 481 + 392 Gaps:41 74.07 509 28.91 9e-20 mol:protein length:509 NADH-QUINONE OXIDOREDUCTASE SUBUNIT M
blastp_pdb 3rko_M 90 481 + 392 Gaps:41 74.07 509 28.91 9e-20 mol:protein length:509 NADH-QUINONE OXIDOREDUCTASE SUBUNIT M
blastp_pdb 3rko_D 139 476 + 338 Gaps:33 68.66 485 27.03 1e-11 mol:protein length:485 NADH-QUINONE OXIDOREDUCTASE SUBUNIT N
blastp_pdb 3rko_N 139 476 + 338 Gaps:33 68.66 485 27.03 1e-11 mol:protein length:485 NADH-QUINONE OXIDOREDUCTASE SUBUNIT N
blastp_uniprot_sprot sp|B1NWJ6|NU5C_MANES 1 752 + 752 Gaps:7 99.87 752 78.96 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Manihot esculenta GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q2QD43|NU5C_CUCSA 1 747 + 747 Gaps:6 99.60 748 79.19 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Cucumis sativus GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q32091|NU5C_CARTI 1 748 + 748 Gaps:7 99.73 743 78.68 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Carthamus tinctorius GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|P51095|NU5C_ADEHI 1 751 + 751 Gaps:9 100.00 744 78.76 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Adenocaulon himalaicum GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q49KV1|NU5C_EUCGG 1 727 + 727 Gaps:6 98.50 734 81.05 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Eucalyptus globulus subsp. globulus GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q32551|NU5C_MUTAC 1 751 + 751 Gaps:9 100.00 744 78.49 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Mutisia acuminata GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|P51099|NU5C_ATRJA 1 747 + 747 Gaps:8 98.93 749 78.54 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Atractylodes japonica GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q8S8V0|NU5C_ATRBE 1 751 + 751 Gaps:15 100.00 740 78.51 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Atropa belladonna GN ndhF PE 3 SV 1
blastp_uniprot_sprot sp|Q32539|NU5C_LACSA 1 748 + 748 Gaps:12 99.73 742 78.51 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Lactuca sativa GN ndhF PE 3 SV 2
blastp_uniprot_sprot sp|Q32007|NU5C_CICIN 1 748 + 748 Gaps:11 99.73 741 78.08 0.0 NAD(P)H-quinone oxidoreductase subunit 5 chloroplastic OS Cichorium intybus GN ndhF PE 3 SV 1
rpsblast_cdd gnl|CDD|176967 1 752 + 752 Gaps:13 100.00 741 82.32 0.0 CHL00025 ndhF NADH dehydrogenase subunit 5.
rpsblast_cdd gnl|CDD|180952 1 745 + 745 Gaps:30 93.76 673 50.08 0.0 PRK07376 PRK07376 NAD(P)H-quinone oxidoreductase subunit F Validated.
rpsblast_cdd gnl|CDD|180633 7 755 + 749 Gaps:78 98.24 624 42.58 1e-146 PRK06590 PRK06590 NADH:ubiquinone oxidoreductase subunit L Reviewed.
rpsblast_cdd gnl|CDD|200148 45 457 + 413 Gaps:19 66.34 609 50.74 1e-126 TIGR01974 NDH_I_L proton-translocating NADH-quinone oxidoreductase chain L. This model describes the 12th (based on E. coli) structural gene L of bacterial NADH dehydrogenase I as well as chain 5 of the corresponding mitochondrial complex I and subunit 5 (or F) of the chloroplast NAD(P)H-plastoquinone dehydrogenase complex.

58 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 425 448 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 449 548 100 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 168 187 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 241 260 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 146 167 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 222 240 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 41 61 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 30 40 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 394 413 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 730 756 27 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 355 374 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 313 327 15 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 449 697 249 PF01010 none NADH-Ubiquinone oxidoreductase (complex I) subunit C-terminus IPR002128
Phobius 188 210 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 414 424 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 607 629 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PRINTS 119 139 21 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 259 285 27 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 327 339 13 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 436 455 20 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 166 187 22 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 237 258 22 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
PRINTS 91 116 26 PR01434 none NADH-ubiquinone oxidoreductase chain 5 signature none
Phobius 111 121 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 89 110 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 8 457 450 PTHR22773:SF76 none none none
Phobius 283 287 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 93 113 21 PR01435 none NADH-plastoquinone oxidoreductase chain 5 signature IPR018393
PRINTS 687 713 27 PR01435 none NADH-plastoquinone oxidoreductase chain 5 signature IPR018393
PRINTS 67 91 25 PR01435 none NADH-plastoquinone oxidoreductase chain 5 signature IPR018393

16 Localization

Analysis Start End Length
TMHMM 39 61 22
TMHMM 289 311 22
TMHMM 89 111 22
TMHMM 260 282 22
TMHMM 548 570 22
TMHMM 121 143 22
TMHMM 148 168 20
TMHMM 355 374 19
TMHMM 222 240 18
TMHMM 394 416 22
TMHMM 607 629 22
TMHMM 7 29 22
TMHMM 326 348 22
TMHMM 730 752 22
TMHMM 188 210 22
TMHMM 425 447 22

8 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.985 0.012 NON-PLANT 23