Protein : Qrob_P0268410.2 Q. robur
Protein Identifier  ? Qrob_P0268410.2 Organism . Name  Quercus robur
Score  99.2 Score Type  egn
Protein Description  (M=11) PTHR11654:SF94 - PROTEIN NRT1/ PTR FAMILY 5.10-RELATED (PTHR11654:SF94) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 294  
Kegg Orthology  K14638
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0006857 oligopeptide transport The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103339078 7 293 + 287 Gaps:1 50.35 572 71.53 4e-136 protein NRT1/ PTR FAMILY 5.10-like
blastp_kegg lcl|pper:PRUPE_ppa003472mg 7 293 + 287 Gaps:1 50.35 572 70.83 2e-132 hypothetical protein
blastp_kegg lcl|vvi:100854655 7 293 + 287 Gaps:4 50.52 572 68.17 2e-128 probable peptide/nitrate transporter At1g22540-like
blastp_kegg lcl|cic:CICLE_v10000719mg 1 293 + 293 Gaps:5 51.32 569 65.41 2e-127 hypothetical protein
blastp_kegg lcl|cit:102615123 1 293 + 293 Gaps:5 51.32 569 65.41 2e-127 probable peptide/nitrate transporter At1g22540-like
blastp_kegg lcl|mdm:103402195 7 293 + 287 Gaps:19 55.70 684 72.97 3e-126 protein NRT1/ PTR FAMILY 5.10-like
blastp_kegg lcl|vvi:100854725 7 293 + 287 Gaps:4 50.52 572 68.86 2e-124 probable peptide/nitrate transporter At1g22540-like
blastp_kegg lcl|pxb:103952552 7 293 + 287 Gaps:17 48.83 557 72.43 4e-124 protein NRT1/ PTR FAMILY 5.10-like
blastp_kegg lcl|cmo:103482564 7 293 + 287 Gaps:2 51.33 563 64.36 2e-123 protein NRT1/ PTR FAMILY 5.10-like
blastp_kegg lcl|pxb:103952548 7 293 + 287 Gaps:17 48.83 557 71.69 8e-123 protein NRT1/ PTR FAMILY 5.10-like
blastp_pdb 2xut_C 33 252 + 220 Gaps:31 38.36 524 34.83 2e-22 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_pdb 2xut_B 33 252 + 220 Gaps:31 38.36 524 34.83 2e-22 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_pdb 2xut_A 33 252 + 220 Gaps:31 38.36 524 34.83 2e-22 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_uniprot_sprot sp|Q0WP01|PTR9_ARATH 17 279 + 263 Gaps:5 46.68 557 65.00 1e-104 Protein NRT1/ PTR FAMILY 5.10 OS Arabidopsis thaliana GN NPF5.10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SK99|PTR11_ARATH 8 277 + 270 Gaps:7 48.32 565 59.71 5e-99 Protein NRT1/ PTR FAMILY 5.15 OS Arabidopsis thaliana GN NPF5.15 PE 2 SV 1
blastp_uniprot_sprot sp|Q0WSZ6|PTR23_ARATH 17 291 + 275 Gaps:14 48.31 561 59.04 3e-94 Protein NRT1/ PTR FAMILY 5.13 OS Arabidopsis thaliana GN NPF5.13 PE 2 SV 2
blastp_uniprot_sprot sp|Q8VZE2|PTR22_ARATH 17 289 + 273 Gaps:12 48.29 557 57.99 4e-93 Protein NRT1/ PTR FAMILY 5.14 OS Arabidopsis thaliana GN NPF5.14 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SK96|PTR10_ARATH 10 270 + 261 Gaps:5 46.81 564 58.33 6e-91 Protein NRT1/ PTR FAMILY 5.16 OS Arabidopsis thaliana GN NPF5.16 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C7U1|PTR25_ARATH 17 293 + 277 Gaps:17 49.37 555 51.82 4e-88 Protein NRT1/ PTR FAMILY 5.12 OS Arabidopsis thaliana GN NPF5.12 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RX67|PTR24_ARATH 25 293 + 269 Gaps:15 49.07 538 56.44 1e-86 Protein NRT1/ PTR FAMILY 5.11 OS Arabidopsis thaliana GN NPF5.11 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M1I2|PTR46_ARATH 26 291 + 266 Gaps:21 45.59 555 48.22 2e-75 Protein NRT1/ PTR FAMILY 5.4 OS Arabidopsis thaliana GN NPF5.4 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FNL8|PTR4_ARATH 10 293 + 284 Gaps:18 49.83 586 41.10 3e-72 Protein NRT1/ PTR FAMILY 5.3 OS Arabidopsis thaliana GN NPF5.3 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZR7|PTR30_ARATH 14 277 + 264 Gaps:3 44.77 583 44.83 5e-71 Protein NRT1/ PTR FAMILY 5.1 OS Arabidopsis thaliana GN NPF5.1 PE 2 SV 2
rpsblast_cdd gnl|CDD|144446 100 267 + 168 Gaps:19 40.59 372 47.02 6e-35 pfam00854 PTR2 POT family. The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.
rpsblast_cdd gnl|CDD|32918 38 242 + 205 Gaps:29 36.95 498 31.52 4e-27 COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism].
rpsblast_cdd gnl|CDD|162112 47 273 + 227 Gaps:26 32.87 654 33.49 7e-26 TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics the antitumor agent bestatin and various protease inhibitors).
rpsblast_cdd gnl|CDD|162111 41 245 + 205 Gaps:28 38.11 475 29.28 7e-17 TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter) bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters although they are found in yeast plants and animals. They function by proton symport in a 1:1 stoichiometry which is variable in different species. All of them are predicted to contain 12 transmembrane domains for which limited experimental evidence exists.
rpsblast_cdd gnl|CDD|185359 33 245 + 213 Gaps:26 37.93 493 27.81 2e-15 PRK15462 PRK15462 dipeptide/tripeptide permease D Provisional.
rpsblast_cdd gnl|CDD|182306 38 251 + 214 Gaps:30 37.63 489 28.80 4e-11 PRK10207 PRK10207 dipeptide/tripeptide permease B Provisional.
rpsblast_cdd gnl|CDD|181969 38 237 + 200 Gaps:26 34.80 500 25.86 2e-09 PRK09584 tppB putative tripeptide transporter permease Reviewed.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 100 271 172 PF00854 "Reactome:REACT_15518","Reactome:REACT_19419" POT family IPR000109
Phobius 1 102 102 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 27 267 241 SSF103473 none none IPR020846
Phobius 217 237 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 103 124 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 10 270 261 PTHR11654 "Reactome:REACT_15518","Reactome:REACT_19419";signature_desc=OLIGOPEPTIDE TRANSPORTER-RELATED none IPR000109
Gene3D 47 244 198 G3DSA:1.20.1250.20 none none none
Phobius 212 216 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 89 113 25 PS01022 "Reactome:REACT_15518","Reactome:REACT_19419" PTR2 family proton/oligopeptide symporters signature 1. IPR018456
Phobius 125 143 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 163 191 29 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 238 293 56 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 10 270 261 PTHR11654:SF94 none none none
Phobius 144 162 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 192 211 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

4 Localization

Analysis Start End Length
TMHMM 189 211 22
TMHMM 103 122 19
TMHMM 137 159 22
TMHMM 215 237 22

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting