Protein : Qrob_P0264580.2 Q. robur
Protein Identifier  ? Qrob_P0264580.2 Organism . Name  Quercus robur
Score  22.1 Score Type  egn
Protein Description  (M=4) 6.1.1.12 - Aspartate--tRNA ligase. Code Enzyme  EC:6.1.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 272  
Kegg Orthology  K01876
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0004815 aspartate-tRNA ligase activity Catalysis of the reaction: ATP + L-aspartate + tRNA(Asp) = AMP + diphosphate + L-aspartyl-tRNA(Asp).
GO:0006422 aspartyl-tRNA aminoacylation The process of coupling aspartate to aspartyl-tRNA, catalyzed by aspartyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.

45 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cmo:103503781 1 271 + 271 none 49.72 545 88.19 3e-176 aspartate--tRNA ligase cytoplasmic
blastp_kegg lcl|csv:101222217 1 271 + 271 none 49.72 545 87.45 8e-175 aspartate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|cam:101508623 1 271 + 271 none 50.37 538 86.35 2e-173 aspartate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|sot:102590401 1 271 + 271 none 50.28 539 84.87 8e-172 aspartate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|gmx:100788164 1 271 + 271 none 49.91 543 85.61 1e-171 aspartate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|gmx:100811577 1 271 + 271 none 49.82 544 85.24 2e-171 aspartate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|mtr:MTR_1g014140 1 271 + 271 none 50.09 541 84.87 4e-171 Aspartyl-tRNA synthetase
blastp_kegg lcl|cam:101505221 1 271 + 271 none 50.28 539 84.87 5e-171 aspartate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|sly:101247918 1 271 + 271 none 49.82 544 84.13 6e-171 aspartate--tRNA ligase cytoplasmic-like
blastp_kegg lcl|tcc:TCM_036751 1 271 + 271 none 49.91 543 84.87 4e-168 Class II aminoacyl-tRNA and biotin synthetases superfamily protein isoform 1
blastp_pdb 1eov_A 3 271 + 269 Gaps:7 54.62 487 54.89 2e-92 mol:protein length:487 ASPARTYL-TRNA SYNTHETASE
blastp_pdb 1asz_B 3 271 + 269 Gaps:7 54.29 490 54.89 3e-92 mol:protein length:490 ASPARTYL-tRNA SYNTHETASE
blastp_pdb 1asz_A 3 271 + 269 Gaps:7 54.29 490 54.89 3e-92 mol:protein length:490 ASPARTYL-tRNA SYNTHETASE
blastp_pdb 1asy_B 3 271 + 269 Gaps:7 54.29 490 54.89 3e-92 mol:protein length:490 ASPARTYL-tRNA SYNTHETASE
blastp_pdb 1asy_A 3 271 + 269 Gaps:7 54.29 490 54.89 3e-92 mol:protein length:490 ASPARTYL-tRNA SYNTHETASE
blastp_pdb 3i7f_B 19 271 + 253 Gaps:3 45.62 548 54.40 7e-86 mol:protein length:548 Aspartyl-tRNA synthetase
blastp_pdb 3i7f_A 19 271 + 253 Gaps:3 45.62 548 54.40 7e-86 mol:protein length:548 Aspartyl-tRNA synthetase
blastp_pdb 3nen_B 34 266 + 233 Gaps:5 52.05 438 38.60 1e-45 mol:protein length:438 Aspartyl-tRNA synthetase
blastp_pdb 3nen_A 34 266 + 233 Gaps:5 52.05 438 38.60 1e-45 mol:protein length:438 Aspartyl-tRNA synthetase
blastp_pdb 3nem_B 34 266 + 233 Gaps:5 52.05 438 38.60 1e-45 mol:protein length:438 Aspartyl-tRNA synthetase
blastp_uniprot_sprot sp|P04802|SYDC_YEAST 3 271 + 269 Gaps:7 47.76 557 54.89 2e-91 Aspartate--tRNA ligase cytoplasmic OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN DPS1 PE 1 SV 3
blastp_uniprot_sprot sp|Q922B2|SYDC_MOUSE 2 271 + 270 Gaps:5 52.89 501 52.83 4e-88 Aspartate--tRNA ligase cytoplasmic OS Mus musculus GN Dars PE 2 SV 2
blastp_uniprot_sprot sp|P15178|SYDC_RAT 2 271 + 270 Gaps:5 52.89 501 52.45 6e-88 Aspartate--tRNA ligase cytoplasmic OS Rattus norvegicus GN Dars PE 2 SV 1
blastp_uniprot_sprot sp|Q3SYZ4|SYDC_BOVIN 2 271 + 270 Gaps:5 52.89 501 52.45 8e-87 Aspartate--tRNA ligase cytoplasmic OS Bos taurus GN DARS PE 2 SV 1
blastp_uniprot_sprot sp|Q03577|SYDC_CAEEL 2 271 + 270 Gaps:1 51.04 531 49.45 5e-85 Aspartate--tRNA ligase cytoplasmic OS Caenorhabditis elegans GN drs-1 PE 3 SV 1
blastp_uniprot_sprot sp|P14868|SYDC_HUMAN 2 271 + 270 Gaps:5 52.89 501 52.08 6e-85 Aspartate--tRNA ligase cytoplasmic OS Homo sapiens GN DARS PE 1 SV 2
blastp_uniprot_sprot sp|Q5R9I5|SYDC_PONAB 2 271 + 270 Gaps:5 52.89 501 51.70 4e-84 Aspartate--tRNA ligase cytoplasmic OS Pongo abelii GN DARS PE 2 SV 1
blastp_uniprot_sprot sp|Q75JQ1|SYDC1_DICDI 7 271 + 265 Gaps:10 46.01 576 49.06 7e-83 Aspartate--tRNA ligase cytoplasmic 1 OS Dictyostelium discoideum GN aspS1 PE 3 SV 1
blastp_uniprot_sprot sp|O74407|SYDC_SCHPO 4 271 + 268 Gaps:24 50.34 580 46.92 3e-80 Aspartate--tRNA ligase cytoplasmic OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN dps1 PE 1 SV 1
blastp_uniprot_sprot sp|Q8SRQ8|SYDC_ENCCU 3 260 + 258 Gaps:8 53.70 473 42.52 2e-59 Probable aspartate--tRNA ligase cytoplasmic OS Encephalitozoon cuniculi (strain GB-M1) GN ECU06_0790 PE 3 SV 1

8 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 103 115 13 PR01042 "Reactome:REACT_71" Aspartyl-tRNA synthetase signature IPR002312
PRINTS 120 133 14 PR01042 "Reactome:REACT_71" Aspartyl-tRNA synthetase signature IPR002312
Gene3D 31 271 241 G3DSA:3.30.930.10 none none none
PANTHER 1 271 271 PTHR22594:SF10 none none IPR004523
ProSiteProfiles 63 271 209 PS50862 "Reactome:REACT_71" Aminoacyl-transfer RNA synthetases class-II family profile. IPR006195
Pfam 32 266 235 PF00152 "Reactome:REACT_71" tRNA synthetases class II (D, K and N) IPR004364
PANTHER 1 271 271 PTHR22594 "Reactome:REACT_71";signature_desc=ASPARTYL/LYSYL-TRNA SYNTHETASE none IPR018150
SUPERFAMILY 28 270 243 SSF55681 none none none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting