Protein : Qrob_P0264490.2 Q. robur
Protein Identifier  ? Qrob_P0264490.2 Organism . Name  Quercus robur
Score  76.1 Score Type  egn
Protein Description  (M=1) K01937 - CTP synthase [EC:6.3.4.2] Code Enzyme  EC:6.3.4.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 541  
Kegg Orthology  K01937
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006221 pyrimidine nucleotide biosynthetic process The chemical reactions and pathways resulting in the formation of a pyrimidine nucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.
GO:0003883 CTP synthase activity Catalysis of the reaction: ATP + UTP + NH3 = ADP + phosphate + CTP.

40 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103334035 1 540 + 540 Gaps:21 100.00 561 86.63 0.0 CTP synthase
blastp_kegg lcl|pop:POPTR_0014s11830g 1 539 + 539 Gaps:21 89.03 629 85.54 0.0 POPTRDRAFT_731738 hypothetical protein
blastp_kegg lcl|pxb:103931990 1 540 + 540 Gaps:21 100.00 561 85.38 0.0 CTP synthase-like
blastp_kegg lcl|pper:PRUPE_ppa003624mg 1 540 + 540 Gaps:21 100.00 561 85.74 0.0 hypothetical protein
blastp_kegg lcl|fve:101305562 1 538 + 538 Gaps:21 99.64 561 85.51 0.0 CTP synthase-like isoform 1
blastp_kegg lcl|pxb:103967154 1 540 + 540 Gaps:21 99.29 565 85.38 0.0 CTP synthase-like
blastp_kegg lcl|vvi:100248684 1 540 + 540 Gaps:22 100.00 560 85.54 0.0 CTP synthase-like
blastp_kegg lcl|tcc:TCM_004769 1 540 + 540 Gaps:21 100.00 561 84.49 0.0 CTP synthase family protein isoform 1
blastp_kegg lcl|rcu:RCOM_1347860 1 539 + 539 Gaps:21 99.82 561 84.82 0.0 ctp synthase putative (EC:6.3.4.2)
blastp_kegg lcl|mdm:103432642 1 538 + 538 Gaps:21 98.94 565 85.51 0.0 CTP synthase
blastp_pdb 3nva_B 2 525 + 524 Gaps:43 98.88 535 47.45 2e-168 mol:protein length:535 CTP synthase
blastp_pdb 3nva_A 2 525 + 524 Gaps:43 98.88 535 47.45 2e-168 mol:protein length:535 CTP synthase
blastp_pdb 1vco_A 2 530 + 529 Gaps:47 97.45 550 49.07 6e-164 mol:protein length:550 CTP synthetase
blastp_pdb 1vcn_A 2 530 + 529 Gaps:47 97.45 550 49.07 1e-163 mol:protein length:550 CTP synthetase
blastp_pdb 1vcm_A 2 530 + 529 Gaps:47 97.45 550 49.07 1e-163 mol:protein length:550 CTP synthetase
blastp_pdb 2ad5_B 3 526 + 524 Gaps:53 97.80 545 45.40 3e-151 mol:protein length:545 CTP synthase
blastp_pdb 2ad5_A 3 526 + 524 Gaps:53 97.80 545 45.40 3e-151 mol:protein length:545 CTP synthase
blastp_pdb 1s1m_B 3 526 + 524 Gaps:53 97.80 545 45.40 3e-151 mol:protein length:545 CTP synthase
blastp_pdb 1s1m_A 3 526 + 524 Gaps:53 97.80 545 45.40 3e-151 mol:protein length:545 CTP synthase
blastp_pdb 3ihl_B 1 239 + 239 Gaps:1 85.11 282 68.33 1e-118 mol:protein length:282 CTP synthase 2
blastp_uniprot_sprot sp|Q54V77|PYRG_DICDI 1 530 + 530 Gaps:41 99.65 569 58.91 0.0 CTP synthase OS Dictyostelium discoideum GN ctps PE 3 SV 1
blastp_uniprot_sprot sp|Q6GME1|PYRG2_XENLA 1 539 + 539 Gaps:25 96.54 578 57.71 0.0 CTP synthase 2 OS Xenopus laevis GN ctps2 PE 2 SV 1
blastp_uniprot_sprot sp|P70698|PYRG1_MOUSE 1 535 + 535 Gaps:22 94.25 591 57.63 0.0 CTP synthase 1 OS Mus musculus GN Ctps1 PE 1 SV 2
blastp_uniprot_sprot sp|P17812|PYRG1_HUMAN 1 535 + 535 Gaps:22 94.25 591 57.09 0.0 CTP synthase 1 OS Homo sapiens GN CTPS1 PE 1 SV 2
blastp_uniprot_sprot sp|Q6PEI7|PYRG1_DANRE 1 535 + 535 Gaps:22 94.25 591 55.83 0.0 CTP synthase 1 OS Danio rerio GN ctps1 PE 1 SV 1
blastp_uniprot_sprot sp|Q5XHA8|PYG1A_XENLA 1 535 + 535 Gaps:22 94.25 591 57.09 0.0 CTP synthase 1-A OS Xenopus laevis GN ctps1-a PE 2 SV 1
blastp_uniprot_sprot sp|Q5F3Z1|PYRG2_CHICK 1 535 + 535 Gaps:22 95.05 586 56.55 0.0 CTP synthase 2 OS Gallus gallus GN CTPS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZXP9|PYG1B_XENLA 1 535 + 535 Gaps:22 94.25 591 56.19 0.0 CTP synthase 1-B OS Xenopus laevis GN ctps1-b PE 2 SV 1
blastp_uniprot_sprot sp|Q1RMS2|PYRG2_BOVIN 1 533 + 533 Gaps:22 94.71 586 55.86 0.0 CTP synthase 2 OS Bos taurus GN CTPS2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9NRF8|PYRG2_HUMAN 1 533 + 533 Gaps:22 94.71 586 55.86 0.0 CTP synthase 2 OS Homo sapiens GN CTPS2 PE 1 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 278 531 254 PS51273 "Reactome:REACT_1698" Glutamine amidotransferase type 1 domain profile. IPR017926
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Gene3D 274 530 257 G3DSA:3.40.50.880 none none IPR029062
SUPERFAMILY 1 240 240 SSF52540 none none IPR027417
Phobius 1 3 3 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 1 240 240 G3DSA:3.40.50.300 none none IPR027417
Pfam 288 522 235 PF00117 "Reactome:REACT_1698" Glutamine amidotransferase class-I IPR017926
SUPERFAMILY 276 527 252 SSF52317 none none IPR029062
PANTHER 1 533 533 PTHR11550 "KEGG:00240+6.3.4.2","MetaCyc:PWY-7176","MetaCyc:PWY-7177","MetaCyc:PWY-7185","Reactome:REACT_1698","UniPathway:UPA00159";signature_desc=CTP SYNTHASE none IPR004468
Phobius 16 20 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 1 240 240 PF06418 "KEGG:00240+6.3.4.2","MetaCyc:PWY-7176","MetaCyc:PWY-7177","MetaCyc:PWY-7185","Reactome:REACT_1698","UniPathway:UPA00159" CTP synthase N-terminus IPR017456
Phobius 21 540 520 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 4 15 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

0 Targeting