Protein : Qrob_P0264420.2 Q. robur
Protein Identifier  ? Qrob_P0264420.2 Organism . Name  Quercus robur
Score  84.0 Score Type  egn
Protein Description  (M=1) PTHR23316//PTHR23316:SF0 - IMPORTIN ALPHA // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 720  
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0 Synonyms

6 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.
GO:0005737 cytoplasm All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO:0005634 nucleus A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO:0008565 protein transporter activity Enables the directed movement of proteins into, out of or within a cell, or between cells.
GO:0006606 protein import into nucleus The directed movement of a protein from the cytoplasm to the nucleus.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_004757 1 708 + 708 Gaps:131 99.06 534 89.41 0.0 Importin alpha ALPHA AIMP ALPHA isoform 1
blastp_kegg lcl|vvi:100248248 1 708 + 708 Gaps:131 99.05 529 86.83 0.0 importin subunit alpha-1-like
blastp_kegg lcl|vvi:100242672 1 708 + 708 Gaps:131 99.05 527 86.59 0.0 importin subunit alpha-1-like
blastp_kegg lcl|rcu:RCOM_1434500 1 708 + 708 Gaps:123 99.06 531 87.26 0.0 importin alpha putative
blastp_kegg lcl|vvi:100255493 1 718 + 718 Gaps:129 100.00 529 87.52 0.0 importin subunit alpha-like
blastp_kegg lcl|mus:103993682 1 708 + 708 Gaps:125 99.06 531 85.17 0.0 importin subunit alpha-1b-like
blastp_kegg lcl|gmx:100780020 1 708 + 708 Gaps:133 99.06 531 87.45 0.0 importin subunit alpha-1-like
blastp_kegg lcl|tcc:TCM_026737 1 702 + 702 Gaps:128 86.48 599 86.87 0.0 Importin alpha ALPHA AIMP ALPHA isoform 2
blastp_kegg lcl|gmx:100808498 1 708 + 708 Gaps:133 99.06 531 87.26 0.0 importin subunit alpha-1-like
blastp_kegg lcl|cmo:103497811 1 708 + 708 Gaps:132 99.06 530 85.90 0.0 importin subunit alpha-1-like
blastp_pdb 1wa5_B 10 700 + 691 Gaps:138 97.36 530 56.40 1e-125 mol:protein length:530 IMPORTIN ALPHA SUBUNIT
blastp_pdb 1bk6_B 69 678 + 610 Gaps:175 99.76 422 69.60 3e-118 mol:protein length:422 KARYOPHERIN ALPHA
blastp_pdb 1bk6_A 69 678 + 610 Gaps:175 99.76 422 69.60 3e-118 mol:protein length:422 KARYOPHERIN ALPHA
blastp_pdb 1bk5_B 69 678 + 610 Gaps:167 99.76 422 68.65 3e-118 mol:protein length:422 KARYOPHERIN ALPHA
blastp_pdb 1bk5_A 69 678 + 610 Gaps:167 99.76 422 68.65 3e-118 mol:protein length:422 KARYOPHERIN ALPHA
blastp_pdb 1ee5_A 69 678 + 610 Gaps:166 99.76 424 67.38 2e-117 mol:protein length:424 KARYOPHERIN ALPHA
blastp_pdb 1ee4_B 69 678 + 610 Gaps:166 100.00 423 67.38 2e-117 mol:protein length:423 KARYOPHERIN ALPHA
blastp_pdb 1ee4_A 69 678 + 610 Gaps:166 100.00 423 67.38 2e-117 mol:protein length:423 KARYOPHERIN ALPHA
blastp_pdb 1un0_B 71 700 + 630 Gaps:167 99.77 443 66.06 4e-117 mol:protein length:443 IMPORTIN ALPHA SUBUNIT
blastp_pdb 1un0_A 71 700 + 630 Gaps:167 99.77 443 66.06 4e-117 mol:protein length:443 IMPORTIN ALPHA SUBUNIT
blastp_uniprot_sprot sp|Q71VM4|IMA1A_ORYSJ 1 699 + 699 Gaps:135 98.29 526 84.53 0.0 Importin subunit alpha-1a OS Oryza sativa subsp. japonica GN Os01g0253300 PE 1 SV 2
blastp_uniprot_sprot sp|O22478|IMA_SOLLC 1 708 + 708 Gaps:124 99.05 527 81.61 0.0 Importin subunit alpha OS Solanum lycopersicum PE 2 SV 2
blastp_uniprot_sprot sp|Q96321|IMA1_ARATH 1 708 + 708 Gaps:135 99.06 532 82.35 0.0 Importin subunit alpha-1 OS Arabidopsis thaliana GN KAP1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SLX0|IMA1B_ORYSJ 1 718 + 718 Gaps:133 100.00 534 79.78 0.0 Importin subunit alpha-1b OS Oryza sativa subsp. japonica GN Os05g0155500 PE 1 SV 2
blastp_uniprot_sprot sp|O04294|IMA2_ARATH 1 704 + 704 Gaps:101 98.68 531 77.67 0.0 Importin subunit alpha-2 OS Arabidopsis thaliana GN KAP2 PE 1 SV 2
blastp_uniprot_sprot sp|Q76P29|IMAB_DICDI 7 700 + 694 Gaps:147 97.87 516 66.34 6e-159 Importin subunit alpha-B OS Dictyostelium discoideum GN DDB_G0272318 PE 3 SV 1
blastp_uniprot_sprot sp|O94374|IMA2_SCHPO 12 699 + 688 Gaps:137 95.18 539 56.92 4e-135 Importin subunit alpha-2 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN imp1 PE 1 SV 1
blastp_uniprot_sprot sp|O35345|IMA7_MOUSE 34 705 + 672 Gaps:159 92.54 536 61.69 2e-134 Importin subunit alpha-7 OS Mus musculus GN Kpna6 PE 1 SV 2
blastp_uniprot_sprot sp|Q0V7M0|IMA7_BOVIN 34 705 + 672 Gaps:149 92.54 536 61.29 9e-134 Importin subunit alpha-7 OS Bos taurus GN KPNA6 PE 2 SV 1
blastp_uniprot_sprot sp|Q5RBV0|IMA7_PONAB 34 705 + 672 Gaps:149 92.54 536 61.09 2e-132 Importin subunit alpha-7 OS Pongo abelii GN KPNA6 PE 2 SV 1

41 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 5 92 88 PF01749 none Importin beta binding domain IPR002652
ProSiteProfiles 372 415 44 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
ProSiteProfiles 240 282 43 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
Pfam 186 227 42 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 505 541 37 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 544 582 39 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 366 402 37 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 272 310 39 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 144 183 40 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 102 142 41 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 405 443 39 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 587 625 39 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 241 269 29 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Gene3D 505 681 177 G3DSA:1.25.10.10 none none IPR011989
Gene3D 369 454 86 G3DSA:1.25.10.10 none none IPR011989
Gene3D 12 320 309 G3DSA:1.25.10.10 none none IPR011989
PANTHER 587 711 125 PTHR23316 none none none
PANTHER 587 711 125 PTHR23316:SF0 none none none
ProSiteProfiles 155 197 43 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
PANTHER 4 316 313 PTHR23316 none none none
ProSiteProfiles 511 554 44 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
PANTHER 365 447 83 PTHR23316 none none none
SUPERFAMILY 22 311 290 SSF48371 none none IPR016024
SUPERFAMILY 360 451 92 SSF48371 none none IPR016024
ProSiteProfiles 554 582 29 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
SUPERFAMILY 502 683 182 SSF48371 none none IPR016024
SMART 186 227 42 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 543 583 41 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 505 541 37 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 404 444 41 SM00185 none Armadillo/beta-catenin-like repeats IPR000225

0 Localization

3 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran2_2015_nSecLBD_3P Qrob_Chr12 12 s_A4YYC_633 s_2F1IZB_703 18,64 18,01 21,53 lod 6.5 17.2

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 6   Mitochondrion 5 0.044 0.528 NON-PLANT 6