Protein : Qrob_P0263930.2 Q. robur
Protein Identifier  ? Qrob_P0263930.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) 1.2.1.12 - Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating). Code Enzyme  EC:1.2.1.12
Gene Prediction Quality  validated Protein length 

Sequence

Length: 339  
Kegg Orthology  K00134
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0050661 NADP binding Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
GO:0006006 glucose metabolic process The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103452095 3 335 + 333 none 97.65 341 93.99 0.0 glyceraldehyde-3-phosphate dehydrogenase 2 cytosolic
blastp_kegg lcl|cam:101491257 3 335 + 333 none 97.94 340 92.79 0.0 glyceraldehyde-3-phosphate dehydrogenase cytosolic-like
blastp_kegg lcl|mdm:103403121 3 335 + 333 none 97.65 341 93.69 0.0 glyceraldehyde-3-phosphate dehydrogenase cytosolic
blastp_kegg lcl|gmx:100038325 1 337 + 337 none 99.70 338 92.58 0.0 glyceraldehyde-3-dehydrogenase C subunit
blastp_kegg lcl|pmum:103321966 3 335 + 333 none 97.94 340 93.09 0.0 glyceraldehyde-3-phosphate dehydrogenase cytosolic
blastp_kegg lcl|mtr:MTR_3g085850 3 335 + 333 none 97.94 340 91.89 0.0 Glyceraldehyde 3-phosphate dehydrogenase
blastp_kegg lcl|pxb:103949900 3 337 + 335 none 98.24 341 92.24 0.0 GDPHc2 glyceraldehyde-3-phosphate dehydrogenase cytosolic
blastp_kegg lcl|gmx:100782924 3 335 + 333 none 97.94 340 91.89 0.0 glyceraldehyde-3-phosphate dehydrogenase cytosolic-like
blastp_kegg lcl|csv:101214545 1 335 + 335 none 99.41 337 92.24 0.0 glyceraldehyde-3-phosphate dehydrogenase-like
blastp_kegg lcl|vvi:100233024 1 335 + 335 none 99.41 337 91.04 0.0 GAPDH glyceraldehyde-3-phosphate dehydrogenase
blastp_pdb 3e5r_C 1 334 + 334 none 99.11 337 85.93 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e5r_B 1 334 + 334 none 99.11 337 85.93 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e5r_A 1 334 + 334 none 99.11 337 85.93 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e5r_O 1 334 + 334 none 99.11 337 85.93 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_C 2 334 + 333 none 99.11 336 85.89 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_B 2 334 + 333 none 99.11 336 85.89 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_A 2 334 + 333 none 99.11 336 85.89 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 3e6a_O 2 334 + 333 none 99.11 336 85.89 0.0 mol:protein length:336 Glyceraldehyde-3-phosphate dehydrogenase cyt
blastp_pdb 1j0x_R 4 336 + 333 Gaps:2 99.70 332 70.69 9e-168 mol:protein length:332 glyceraldehyde-3-phosphate dehydrogenase
blastp_pdb 1j0x_Q 4 336 + 333 Gaps:2 99.70 332 70.69 9e-168 mol:protein length:332 glyceraldehyde-3-phosphate dehydrogenase
blastp_uniprot_sprot sp|P34921|G3PC_DIACA 1 337 + 337 none 99.70 338 90.21 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Dianthus caryophyllus GN GAPC PE 1 SV 1
blastp_uniprot_sprot sp|Q7FAH2|G3PC2_ORYSJ 1 333 + 333 none 98.81 337 91.29 0.0 Glyceraldehyde-3-phosphate dehydrogenase 2 cytosolic OS Oryza sativa subsp. japonica GN GAPC2 PE 1 SV 1
blastp_uniprot_sprot sp|P34783|G3P_ATRNU 1 334 + 334 none 92.78 360 90.12 0.0 Glyceraldehyde-3-phosphate dehydrogenase OS Atriplex nummularia PE 2 SV 1
blastp_uniprot_sprot sp|Q9FX54|G3PC2_ARATH 3 334 + 332 none 98.22 338 90.06 0.0 Glyceraldehyde-3-phosphate dehydrogenase GAPC2 cytosolic OS Arabidopsis thaliana GN GAPC2 PE 1 SV 1
blastp_uniprot_sprot sp|Q39769|G3PC_GINBI 2 335 + 334 none 98.24 340 90.12 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Ginkgo biloba PE 2 SV 1
blastp_uniprot_sprot sp|P04796|G3PC_SINAL 3 334 + 332 none 98.22 338 89.76 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Sinapis alba GN GAPC PE 2 SV 2
blastp_uniprot_sprot sp|P26518|G3PC_MAGLI 3 335 + 333 Gaps:2 98.24 341 90.45 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Magnolia liliiflora GN GAPC PE 2 SV 1
blastp_uniprot_sprot sp|P25858|G3PC1_ARATH 3 334 + 332 none 98.22 338 89.46 0.0 Glyceraldehyde-3-phosphate dehydrogenase GAPC1 cytosolic OS Arabidopsis thaliana GN GAPC1 PE 1 SV 2
blastp_uniprot_sprot sp|P25861|G3PC_ANTMA 1 335 + 335 none 99.41 337 89.85 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Antirrhinum majus GN GAPC PE 1 SV 1
blastp_uniprot_sprot sp|P34922|G3PC_PEA 2 337 + 336 none 99.41 338 89.58 0.0 Glyceraldehyde-3-phosphate dehydrogenase cytosolic OS Pisum sativum GN GAPC1 PE 1 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 3 170 168 SSF51735 none none none
PANTHER 1 338 338 PTHR10836:SF30 none none none
PANTHER 1 338 338 PTHR10836 "Reactome:REACT_474";signature_desc=GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE none IPR020831
Gene3D 3 162 160 G3DSA:3.40.50.720 none none IPR016040
PRINTS 113 126 14 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 175 191 17 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 148 166 19 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 232 249 18 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 272 287 16 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
SMART 4 154 151 SM00846 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828
ProSitePatterns 152 159 8 PS00071 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase active site. IPR020830
Pfam 159 316 158 PF02800 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IPR020829
SUPERFAMILY 153 316 164 SSF55347 none none none
Pfam 4 154 151 PF00044 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828
Gene3D 163 318 156 G3DSA:3.30.360.10 none none none
TIGRFAM 5 328 324 TIGR01534 "KEGG:00010+1.2.1.12","KEGG:00710+1.2.1.12","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6901","MetaCyc:PWY-7003","Reactome:REACT_474","UniPathway:UPA00109" GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I IPR006424
PIRSF 2 337 336 PIRSF000149 "Reactome:REACT_474" none IPR020831

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 65   Mitochondrion 5 0.093 0.540 NON-PLANT 65