Protein : Qrob_P0263720.2 Q. robur
Protein Identifier  ? Qrob_P0263720.2 Organism . Name  Quercus robur
Score  17.1 Score Type  egn
Protein Description  (M=5) 3.5.1.3 - Omega-amidase. Code Enzyme  EC:3.5.1.3
Gene Prediction Quality  validated Protein length 

Sequence

Length: 263  
Kegg Orthology  K13566
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0006807 nitrogen compound metabolic process The chemical reactions and pathways involving organic or inorganic compounds that contain nitrogen, including (but not limited to) nitrogen fixation, nitrification, denitrification, assimilatory/dissimilatory nitrate reduction and the interconversion of nitrogenous organic matter and ammonium.
GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds Catalysis of the hydrolysis of any carbon-nitrogen bond, C-N, with the exception of peptide bonds.

43 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103453601 8 246 + 239 Gaps:25 86.84 304 71.97 3e-133 omega-amidase chloroplastic-like
blastp_kegg lcl|tcc:TCM_029112 5 261 + 257 Gaps:28 97.89 285 68.46 1e-129 Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase family protein
blastp_kegg lcl|pmum:103327785 8 246 + 239 Gaps:34 89.80 304 68.13 6e-128 omega-amidase chloroplastic-like
blastp_kegg lcl|pxb:103961531 8 247 + 240 Gaps:25 86.60 306 69.06 5e-126 omega-amidase chloroplastic-like
blastp_kegg lcl|sot:102599407 2 247 + 246 Gaps:27 89.51 305 58.24 1e-110 omega-amidase NIT2-A-like
blastp_kegg lcl|mus:103987616 8 247 + 240 Gaps:26 74.30 358 60.15 1e-106 omega-amidase chloroplastic-like
blastp_kegg lcl|pda:103712796 8 246 + 239 Gaps:26 72.21 367 61.51 3e-106 omega-amidase chloroplastic
blastp_kegg lcl|mus:103991078 4 247 + 244 Gaps:26 75.63 357 60.37 1e-105 omega-amidase chloroplastic-like
blastp_kegg lcl|vvi:100266241 5 246 + 242 Gaps:26 73.63 364 58.96 7e-105 omega-amidase NIT2-like
blastp_kegg lcl|mtr:MTR_3g104850 5 246 + 242 Gaps:26 75.07 357 58.21 2e-104 Omega-amidase NIT2
blastp_pdb 2w1v_B 5 247 + 243 Gaps:29 95.65 276 43.94 6e-73 mol:protein length:276 NITRILASE HOMOLOG 2
blastp_pdb 2w1v_A 5 247 + 243 Gaps:29 95.65 276 43.94 6e-73 mol:protein length:276 NITRILASE HOMOLOG 2
blastp_pdb 1f89_B 8 246 + 239 Gaps:30 92.44 291 39.78 6e-58 mol:protein length:291 32.5 KDA PROTEIN YLR351C
blastp_pdb 1f89_A 8 246 + 239 Gaps:30 92.44 291 39.78 6e-58 mol:protein length:291 32.5 KDA PROTEIN YLR351C
blastp_pdb 1ems_B 7 243 + 237 Gaps:41 59.55 440 29.01 5e-25 mol:protein length:440 NIT-FRAGILE HISTIDINE TRIAD FUSION PROTEIN
blastp_pdb 1ems_A 7 243 + 237 Gaps:41 59.55 440 29.01 5e-25 mol:protein length:440 NIT-FRAGILE HISTIDINE TRIAD FUSION PROTEIN
blastp_pdb 3p8k_B 1 245 + 245 Gaps:49 92.53 281 26.54 9e-21 mol:protein length:281 Hydrolase carbon-nitrogen family
blastp_pdb 3p8k_A 1 245 + 245 Gaps:49 92.53 281 26.54 9e-21 mol:protein length:281 Hydrolase carbon-nitrogen family
blastp_pdb 1j31_D 9 254 + 246 Gaps:42 96.95 262 33.07 2e-18 mol:protein length:262 Hypothetical protein PH0642
blastp_pdb 1j31_C 9 254 + 246 Gaps:42 96.95 262 33.07 2e-18 mol:protein length:262 Hypothetical protein PH0642
blastp_uniprot_sprot sp|Q497B0|NIT2_RAT 5 247 + 243 Gaps:29 95.65 276 43.94 4e-74 Omega-amidase NIT2 OS Rattus norvegicus GN Nit2 PE 1 SV 1
blastp_uniprot_sprot sp|Q6INI7|NIT2B_XENLA 5 247 + 243 Gaps:29 95.65 276 44.32 2e-73 Omega-amidase NIT2-B OS Xenopus laevis GN nit2b PE 2 SV 1
blastp_uniprot_sprot sp|Q28IE5|NIT2_XENTR 5 247 + 243 Gaps:29 95.65 276 44.32 3e-73 Omega-amidase NIT2 OS Xenopus tropicalis GN nit2 PE 2 SV 1
blastp_uniprot_sprot sp|Q10166|YAUB_SCHPO 8 259 + 252 Gaps:27 85.40 322 43.27 6e-73 Hydrolase C26A3.11 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC26A3.11 PE 3 SV 1
blastp_uniprot_sprot sp|Q6IR61|NIT2A_XENLA 5 243 + 239 Gaps:29 94.20 276 45.38 9e-73 Omega-amidase NIT2-A OS Xenopus laevis GN nit2a PE 2 SV 1
blastp_uniprot_sprot sp|Q2T9R6|NIT2_BOVIN 5 247 + 243 Gaps:29 95.65 276 43.94 1e-72 Omega-amidase NIT2 OS Bos taurus GN NIT2 PE 2 SV 1
blastp_uniprot_sprot sp|Q9JHW2|NIT2_MOUSE 5 247 + 243 Gaps:29 95.65 276 43.94 2e-72 Omega-amidase NIT2 OS Mus musculus GN Nit2 PE 1 SV 1
blastp_uniprot_sprot sp|Q9NQR4|NIT2_HUMAN 5 247 + 243 Gaps:29 95.65 276 43.56 2e-71 Omega-amidase NIT2 OS Homo sapiens GN NIT2 PE 1 SV 1
blastp_uniprot_sprot sp|Q4VBV9|NIT2_DANRE 5 247 + 243 Gaps:29 95.31 277 42.80 1e-70 Omega-amidase NIT2 OS Danio rerio GN nit2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5R4L6|NIT2_PONAB 5 247 + 243 Gaps:28 95.64 275 43.35 2e-70 Omega-amidase NIT2 OS Pongo abelii GN NIT2 PE 3 SV 1

7 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 10 152 143 PF00795 none Carbon-nitrogen hydrolase IPR003010
Gene3D 7 150 144 G3DSA:3.60.110.10 none none IPR003010
PANTHER 1 246 246 PTHR23088:SF20 none none none
ProSiteProfiles 8 262 255 PS50263 none Carbon-nitrogen hydrolase domain profile. IPR003010
PANTHER 1 246 246 PTHR23088 none none none
Gene3D 151 246 96 G3DSA:3.60.110.10 none none IPR003010
SUPERFAMILY 5 242 238 SSF56317 none none IPR003010

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Bourran2_2002_QTL15_peak_Bud_burst_A4 Qrob_Chr10 10 v_7579_71 s_1ATZMJ_189 23,94 0 43,64 lod 3,7 5,4
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2014_vSeqBC_A4 Qrob_Chr10 10 s_1BAM4E_1326 s_1C0HD0_1012 36,88 7,71 46,03 lod 2,6164 7,3
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5
PM_1999_QTL16_peak_Bud_burst_3P Qrob_Chr10 10 s_1B6YNI_505 s_1A1ZO_1322 7,48 0 31,48 lod 4 7,1

0 Targeting