Protein : Qrob_P0256150.2 Q. robur
Protein Identifier  ? Qrob_P0256150.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=7) K15414 - complement component 1 Q subcomponent-binding protein, mitochondrial Gene Prediction Quality  validated
Protein length 

Sequence

Length: 261  
Kegg Orthology  K15414
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005759 mitochondrial matrix The gel-like material, with considerable fine structure, that lies in the matrix space, or lumen, of a mitochondrion. It contains the enzymes of the tricarboxylic acid cycle and, in some organisms, the enzymes concerned with fatty acid oxidation.

18 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102618890 1 260 + 260 Gaps:17 100.00 245 64.08 1e-91 uncharacterized LOC102618890
blastp_kegg lcl|cic:CICLE_v10012447mg 1 260 + 260 Gaps:17 89.74 273 64.08 2e-91 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s09170g 1 260 + 260 Gaps:15 100.00 245 60.82 2e-88 POPTRDRAFT_819185 succinate dehydrogenase subunit 4 family protein
blastp_kegg lcl|gmx:100790011 1 260 + 260 Gaps:20 100.00 254 57.48 4e-86 uncharacterized LOC100790011
blastp_kegg lcl|pvu:PHAVU_008G115200g 1 260 + 260 Gaps:20 100.00 248 60.89 9e-86 hypothetical protein
blastp_kegg lcl|gmx:100803348 1 260 + 260 Gaps:21 100.00 253 57.71 2e-85 uncharacterized LOC100803348
blastp_kegg lcl|cam:101498815 1 258 + 258 Gaps:21 99.20 251 60.24 3e-79 uncharacterized LOC101498815
blastp_kegg lcl|brp:103847482 1 260 + 260 Gaps:11 100.00 261 52.11 5e-79 uncharacterized protein At2g39795 mitochondrial-like
blastp_kegg lcl|sly:101257446 1 259 + 259 Gaps:22 99.61 258 52.14 2e-78 uncharacterized LOC101257446
blastp_kegg lcl|pop:POPTR_0016s10380g 1 260 + 260 Gaps:17 100.00 243 58.85 3e-78 POPTRDRAFT_735606 succinate dehydrogenase subunit 4 family protein
blastp_pdb 3qv0_A 74 258 + 185 Gaps:37 92.51 227 29.52 1e-13 mol:protein length:227 Mitochondrial acidic protein MAM33
blastp_pdb 3jv1_A 148 258 + 111 Gaps:11 65.93 182 29.17 5e-07 mol:protein length:182 P22 protein
blastp_uniprot_sprot sp|Q8W487|YB95_ARATH 1 260 + 260 Gaps:26 100.00 250 50.00 2e-56 Uncharacterized protein At2g39795 mitochondrial OS Arabidopsis thaliana GN At2g39795 PE 1 SV 1
blastp_uniprot_sprot sp|O22288|Y2979_ARATH 1 259 + 259 Gaps:30 99.58 240 36.82 5e-30 Uncharacterized protein At2g39790 mitochondrial OS Arabidopsis thaliana GN At2g39790 PE 3 SV 2
blastp_uniprot_sprot sp|P40513|MAM33_YEAST 1 258 + 258 Gaps:55 99.62 266 29.81 1e-16 Mitochondrial acidic protein MAM33 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN MAM33 PE 1 SV 1
blastp_uniprot_sprot sp|O94675|MAM33_SCHPO 71 259 + 189 Gaps:28 77.70 269 27.27 3e-12 Mitochondrial acidic protein mam33 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPBC776.07 PE 3 SV 1
rpsblast_cdd gnl|CDD|202207 75 258 + 184 Gaps:20 100.00 202 29.21 6e-21 pfam02330 MAM33 Mitochondrial glycoprotein. This mitochondrial matrix protein family contains members of the MAM33 family which bind to the globular 'heads' of C1Q. It is thought to be involved in mitochondrial oxidative phosphorylation and in nucleus-mitochondrion interactions.
rpsblast_kog gnl|CDD|37747 25 260 + 236 Gaps:14 92.78 263 41.80 2e-49 KOG2536 KOG2536 KOG2536 MAM33 mitochondrial matrix glycoprotein [Energy production and conversion].

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 56 260 205 PTHR10826:SF4 none none none
Phobius 1 9 9 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 75 258 184 PF02330 none Mitochondrial glycoprotein IPR003428
PANTHER 56 260 205 PTHR10826 none none none
Phobius 1 36 36 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 10 18 9 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
SUPERFAMILY 65 259 195 SSF54529 none none IPR003428
Phobius 19 36 18 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Gene3D 64 260 197 G3DSA:3.10.280.10 none none IPR003428
Phobius 37 260 224 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

1 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 20 19

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 36   Mitochondrion 1 0.052 0.946 NON-PLANT 36