Protein : Qrob_P0253980.2 Q. robur
Protein Identifier  ? Qrob_P0253980.2 Organism . Name  Quercus robur
Score  12.1 Score Type  egn
Protein Description  (M=1) KOG0205//KOG1211//KOG1212//KOG2144 - Plasma membrane H+-transporting ATPase [Inorganic ion transport and metabolism]. // Amidases [Translation ribosomal structure and biogenesis]. // Amidases [Translation ribosomal structure and biogenesis Lipid transport and metabolism Signal transduction mechanisms]. // Tyrosyl-tRNA synthetase cytoplasmic [Translation ribosomal structure and biogenesis]. Code Enzyme  EC:6.1.1.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 676  
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0000166 nucleotide binding Interacting selectively and non-covalently with a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate or an oligophosphate at any hydroxyl group on the ribose or deoxyribose.
GO:0004812 aminoacyl-tRNA ligase activity Catalysis of the formation of aminoacyl-tRNA from ATP, amino acid, and tRNA with the release of diphosphate and AMP.
GO:0006418 tRNA aminoacylation for protein translation The synthesis of aminoacyl tRNA by the formation of an ester bond between the 3'-hydroxyl group of the most 3' adenosine of the tRNA, to be used in ribosome-mediated polypeptide synthesis.
GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor Catalysis of the transfer of the amide nitrogen of glutamine to a variety of substrates. GATases catalyze two separate reactions at two active sites, which are located either on a single polypeptide chain or on different subunits. In the glutaminase reaction, glutamine is hydrolyzed to glutamate and ammonia, which is added to an acceptor substrate in the synthase reaction.

44 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa003160mg 1 364 + 364 Gaps:79 74.20 597 64.79 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_014787 1 364 + 364 Gaps:79 69.11 641 63.43 0.0 Amidase family protein isoform 2
blastp_kegg lcl|cit:102616607 1 364 + 364 Gaps:79 67.94 652 63.21 0.0 glutamyl-tRNA(Gln) amidotransferase subunit A mitochondrial-like
blastp_kegg lcl|pmum:103337906 2 364 + 363 Gaps:79 73.91 598 64.48 0.0 glutamyl-tRNA(Gln) amidotransferase subunit A mitochondrial
blastp_kegg lcl|fve:101314239 9 364 + 356 Gaps:79 74.36 585 64.14 0.0 glutamyl-tRNA(Gln) amidotransferase subunit A-like
blastp_kegg lcl|cmo:103490981 2 364 + 363 Gaps:79 74.41 594 63.35 0.0 glutamyl-tRNA(Gln) amidotransferase subunit A mitochondrial
blastp_kegg lcl|csv:101214338 2 364 + 363 Gaps:79 74.79 591 63.35 0.0 glutamyl-tRNA(Gln) amidotransferase subunit A-like
blastp_kegg lcl|vvi:100260952 4 363 + 360 Gaps:79 71.62 613 64.46 0.0 glutamyl-tRNA(Gln) amidotransferase subunit A-like
blastp_kegg lcl|pop:POPTR_0015s12090g 1 364 + 364 Gaps:80 70.72 625 63.57 0.0 POPTRDRAFT_575492 hypothetical protein
blastp_kegg lcl|pxb:103950781 5 364 + 360 Gaps:79 73.17 600 64.01 0.0 glutamyl-tRNA(Gln) amidotransferase subunit A mitochondrial-like
blastp_pdb 3p0j_D 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0j_C 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0j_B 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0j_A 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0i_B 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0i_A 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0h_B 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 3p0h_A 363 588 + 226 Gaps:83 43.91 690 42.57 3e-61 mol:protein length:690 Tyrosyl-tRNA synthetase
blastp_pdb 2j5b_B 359 588 + 230 Gaps:67 83.05 348 35.29 8e-42 mol:protein length:348 TYROSYL-TRNA SYNTHETASE
blastp_pdb 2j5b_A 359 588 + 230 Gaps:67 83.05 348 35.29 8e-42 mol:protein length:348 TYROSYL-TRNA SYNTHETASE
blastp_uniprot_sprot sp|Q5UPJ7|SYY_MIMIV 359 588 + 230 Gaps:67 83.53 346 35.29 3e-41 Tyrosine--tRNA ligase OS Acanthamoeba polyphaga mimivirus GN YARS PE 1 SV 1
blastp_uniprot_sprot sp|Q43128|PMA10_ARATH 557 674 + 118 Gaps:10 13.31 947 58.73 2e-30 ATPase 10 plasma membrane-type OS Arabidopsis thaliana GN AHA10 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SH76|PMA6_ARATH 556 668 + 113 Gaps:9 12.64 949 55.83 3e-28 ATPase 6 plasma membrane-type OS Arabidopsis thaliana GN AHA6 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SU58|PMA4_ARATH 556 663 + 108 Gaps:5 11.56 960 54.05 3e-28 ATPase 4 plasma membrane-type OS Arabidopsis thaliana GN AHA4 PE 1 SV 2
blastp_uniprot_sprot sp|Q9M2A0|PMA8_ARATH 556 668 + 113 Gaps:9 12.66 948 55.00 5e-28 ATPase 8 plasma membrane-type OS Arabidopsis thaliana GN AHA8 PE 1 SV 1
blastp_uniprot_sprot sp|P83970|PMA1_WHEAT 556 668 + 113 Gaps:7 12.62 951 55.00 6e-28 Plasma membrane ATPase OS Triticum aestivum GN ha1 PE 2 SV 1
blastp_uniprot_sprot sp|P23980|PMA2_SOLLC 556 663 + 108 Gaps:5 15.77 704 54.95 2e-27 Plasma membrane ATPase 2 (Fragment) OS Solanum lycopersicum GN LHA2 PE 3 SV 1
blastp_uniprot_sprot sp|B2V855|GATA_SULSY 137 274 + 138 Gaps:3 28.25 485 42.34 2e-27 Glutamyl-tRNA(Gln) amidotransferase subunit A OS Sulfurihydrogenibium sp. (strain YO3AOP1) GN gatA PE 3 SV 1
blastp_uniprot_sprot sp|Q9LV11|PMA11_ARATH 556 663 + 108 Gaps:5 11.61 956 54.05 2e-27 ATPase 11 plasma membrane-type OS Arabidopsis thaliana GN AHA11 PE 1 SV 1
blastp_uniprot_sprot sp|Q08436|PMA3_NICPL 556 663 + 108 Gaps:5 11.61 956 54.95 2e-27 Plasma membrane ATPase 3 OS Nicotiana plumbaginifolia GN PMA3 PE 1 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 44 363 320 PTHR11895 "KEGG:00970+6.3.5.7","MetaCyc:PWY-5921";signature_desc=AMIDASE none IPR000120
SUPERFAMILY 374 579 206 SSF52374 none none none
Phobius 1 588 588 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Pfam 441 527 87 PF00579 "Reactome:REACT_71" tRNA synthetases class I (W and Y) IPR002305
SUPERFAMILY 113 369 257 SSF75304 "KEGG:00970+6.3.5.7","MetaCyc:PWY-5921" none IPR023631
Gene3D 431 489 59 G3DSA:3.40.50.620 none none IPR014729
Gene3D 363 430 68 G3DSA:3.40.50.620 none none IPR014729
Gene3D 591 664 74 G3DSA:1.20.1110.10 none none IPR023298
Gene3D 533 588 56 G3DSA:1.10.240.10 none none none
Gene3D 490 528 39 G3DSA:1.10.240.10 none none none
PANTHER 44 363 320 PTHR11895:SF46 none none none
Phobius 614 649 36 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 650 673 24 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 146 297 152 G3DSA:3.90.1300.10 "KEGG:00970+6.3.5.7","MetaCyc:PWY-5921" none IPR023631
Pfam 146 292 147 PF01425 "KEGG:00970+6.3.5.7","MetaCyc:PWY-5921" Amidase IPR000120
Phobius 674 675 2 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 589 613 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

2 Localization

Analysis Start End Length
TMHMM 591 613 22
TMHMM 650 672 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_rEpiBC_3P Qrob_Chr05 5 s_2GDU0O_517 s_1BT8O3_239 25,81 0 55,45 lod 2,2101 5,5

0 Targeting