Protein : Qrob_P0252040.2 Q. robur
Protein Identifier  ? Qrob_P0252040.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR19241:SF200 - ABC TRANSPORTER G FAMILY MEMBER 3 (PTHR19241:SF200) Code Enzyme  EC:3.6.3.25
Gene Prediction Quality  validated Protein length 

Sequence

Length: 689  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0016887 ATPase activity Catalysis of the reaction: ATP + H2O = ADP + phosphate + 2 H+. May or may not be coupled to another reaction.

47 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|rcu:RCOM_0472860 1 688 + 688 Gaps:38 100.00 722 83.80 0.0 ATP-binding cassette transporter putative (EC:3.6.3.19)
blastp_kegg lcl|vvi:100241317 1 688 + 688 Gaps:40 100.00 722 84.35 0.0 ABC transporter G family member 3-like
blastp_kegg lcl|pop:POPTR_0004s22390g 1 688 + 688 Gaps:39 100.00 723 84.09 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_042133 1 683 + 683 Gaps:39 99.58 721 85.38 0.0 ABC-2 type transporter family protein isoform 1
blastp_kegg lcl|fve:101313640 1 688 + 688 Gaps:39 100.00 723 83.96 0.0 ABC transporter G family member 3-like
blastp_kegg lcl|pper:PRUPE_ppa002046mg 1 687 + 687 Gaps:39 99.72 724 82.69 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s01380g 1 688 + 688 Gaps:40 100.00 722 83.38 0.0 POPTRDRAFT_723618 hypothetical protein
blastp_kegg lcl|cit:102611715 1 688 + 688 Gaps:39 100.00 723 83.82 0.0 ABC transporter G family member 3-like
blastp_kegg lcl|gmx:100799773 1 687 + 687 Gaps:40 99.86 724 82.57 0.0 ABC transporter G family member 3-like
blastp_kegg lcl|mdm:103418860 1 688 + 688 Gaps:39 100.00 723 81.60 0.0 ABC transporter G family member 3-like
blastp_pdb 3rlf_B 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Maltose/maltodextrin import ATP-binding prote
blastp_pdb 3rlf_A 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Maltose/maltodextrin import ATP-binding prote
blastp_pdb 3pv0_B 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Fused maltose transport subunit ATP-binding
blastp_pdb 3pv0_A 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Fused maltose transport subunit ATP-binding
blastp_pdb 3puz_B 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Fused maltose transport subunit ATP-binding
blastp_pdb 3puz_A 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Fused maltose transport subunit ATP-binding
blastp_pdb 3puy_B 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Fused maltose transport subunit ATP-binding
blastp_pdb 3puy_A 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Fused maltose transport subunit ATP-binding
blastp_pdb 3pux_B 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Maltose/maltodextrin import ATP-binding prote
blastp_pdb 3pux_A 138 369 + 232 Gaps:24 59.32 381 31.42 4e-13 mol:protein length:381 Maltose/maltodextrin import ATP-binding prote
blastp_uniprot_sprot sp|Q9ZUU9|AB3G_ARATH 1 673 + 673 Gaps:43 98.08 730 77.79 0.0 ABC transporter G family member 3 OS Arabidopsis thaliana GN ABCG3 PE 1 SV 2
blastp_uniprot_sprot sp|Q8RXN0|AB11G_ARATH 106 657 + 552 Gaps:48 84.50 703 37.04 1e-112 ABC transporter G family member 11 OS Arabidopsis thaliana GN ABCG11 PE 1 SV 1
blastp_uniprot_sprot sp|Q8RWI9|AB15G_ARATH 105 686 + 582 Gaps:63 90.74 691 35.25 8e-111 ABC transporter G family member 15 OS Arabidopsis thaliana GN ABCG15 PE 2 SV 2
blastp_uniprot_sprot sp|Q9C8K2|AB12G_ARATH 80 688 + 609 Gaps:62 94.47 687 34.82 1e-108 ABC transporter G family member 12 OS Arabidopsis thaliana GN ABCG12 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C8J8|AB13G_ARATH 94 667 + 574 Gaps:72 91.74 678 33.60 6e-96 ABC transporter G family member 13 OS Arabidopsis thaliana GN ABCG13 PE 2 SV 1
blastp_uniprot_sprot sp|Q9H222|ABCG5_HUMAN 110 606 + 497 Gaps:53 75.27 651 30.61 3e-49 ATP-binding cassette sub-family G member 5 OS Homo sapiens GN ABCG5 PE 1 SV 1
blastp_uniprot_sprot sp|Q5MB13|ABCG2_MACMU 103 666 + 564 Gaps:96 94.50 654 26.70 5e-49 ATP-binding cassette sub-family G member 2 OS Macaca mulatta GN ABCG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q80W57|ABCG2_RAT 100 566 + 467 Gaps:29 73.67 657 29.13 3e-48 ATP-binding cassette sub-family G member 2 OS Rattus norvegicus GN Abcg2 PE 1 SV 1
blastp_uniprot_sprot sp|Q8MIB3|ABCG2_PIG 80 569 + 490 Gaps:42 76.83 656 29.96 1e-47 ATP-binding cassette sub-family G member 2 OS Sus scrofa GN ABCG2 PE 2 SV 1
blastp_uniprot_sprot sp|Q4GZT4|ABCG2_BOVIN 103 587 + 485 Gaps:32 74.66 655 30.27 2e-47 ATP-binding cassette sub-family G member 2 OS Bos taurus GN ABCG2 PE 3 SV 2

23 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 436 593 158 PF01061 none ABC-2 type transporter IPR013525
Phobius 567 589 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 667 688 22 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 108 350 243 PS50893 none ATP-binding cassette, ABC transporter-type domain profile. IPR003439
Pfam 137 277 141 PF00005 none ABC transporter IPR003439
Phobius 556 566 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 454 475 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Gene3D 109 341 233 G3DSA:3.40.50.300 none none IPR027417
Phobius 509 527 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 590 645 56 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 397 672 276 PTHR19241:SF200 none none none
PANTHER 43 73 31 PTHR19241:SF200 none none none
PANTHER 43 73 31 PTHR19241 none none none
Phobius 476 486 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SUPERFAMILY 111 344 234 SSF52540 none none IPR027417
Phobius 646 666 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 104 376 273 PTHR19241:SF200 none none none
Phobius 1 453 453 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SMART 137 327 191 SM00382 none ATPases associated with a variety of cellular activities IPR003593
PANTHER 104 376 273 PTHR19241 none none none
PANTHER 397 672 276 PTHR19241 none none none
Phobius 528 555 28 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 487 508 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none

5 Localization

Analysis Start End Length
TMHMM 482 504 22
TMHMM 567 589 22
TMHMM 453 475 22
TMHMM 646 668 22
TMHMM 533 555 22

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting