Protein : Qrob_P0252030.2 Q. robur
Protein Identifier  ? Qrob_P0252030.2 Organism . Name  Quercus robur
Score  52.3 Score Type  egn
Protein Description  (M=1) KOG0727//KOG0728//KOG0729//KOG0730//KOG0731//KOG0733//KOG0734//KOG0735//KOG0736//KOG0738 - 26S proteasome regulatory complex ATPase RPT3 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT6 [Posttranslational modification protein turnover chaperones]. // 26S proteasome regulatory complex ATPase RPT1 [Posttranslational modification protein turnover chaperones]. // AAA+-type ATPase [Posttranslational modification protein turnover chaperones]. // AAA+-type ATPase containing the peptidase M41 domain [Posttranslational modification protein turnover chaperones]. // Nuclear AAA ATPase (VCP subfamily) [Posttranslational modification protein turnover chaperones]. // AAA+-type ATPase containing the peptidase M41 domain [Posttranslational modification protein turnover chaperones]. // AAA+-type ATPase [Posttranslational modification protein turnover chaperones]. // Peroxisome assembly factor 2 containing the AAA+-type ATPase domain [Posttranslational modification protein turnover chaperones]. // AAA+-type ATPase [Posttranslational modification protein turnover chaperones]. Code Enzyme  EC:3.6.4.6
Gene Prediction Quality  validated Protein length 

Sequence

Length: 506  
Kegg Orthology  K13525
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_042132 1 505 + 505 Gaps:31 72.26 804 87.95 0.0 ATPase AAA-type CDC48 protein
blastp_kegg lcl|pxb:103927454 1 505 + 505 Gaps:29 72.33 806 86.79 0.0 cell division control protein 48 homolog D
blastp_kegg lcl|pxb:103965472 1 505 + 505 Gaps:29 72.33 806 86.79 0.0 cell division control protein 48 homolog D-like
blastp_kegg lcl|pmum:103342159 1 505 + 505 Gaps:29 72.33 806 86.79 0.0 cell division control protein 48 homolog D
blastp_kegg lcl|csv:101219394 1 505 + 505 Gaps:30 72.26 804 87.44 0.0 cell division cycle protein 48 homolog
blastp_kegg lcl|mus:103985026 1 505 + 505 Gaps:31 72.31 809 87.01 0.0 cell division cycle protein 48 homolog
blastp_kegg lcl|cmo:103486491 1 505 + 505 Gaps:30 72.26 804 87.44 0.0 cell division control protein 48 homolog E
blastp_kegg lcl|mdm:103423351 1 505 + 505 Gaps:29 72.33 806 86.79 0.0 cell division control protein 48 homolog D
blastp_kegg lcl|mdm:103413697 1 505 + 505 Gaps:29 72.33 806 86.79 0.0 cell division control protein 48 homolog D
blastp_kegg lcl|pper:PRUPE_ppa001552mg 1 505 + 505 Gaps:30 72.48 803 87.11 0.0 hypothetical protein
blastp_pdb 1r7r_A 1 476 + 476 Gaps:29 67.89 816 75.99 0.0 mol:protein length:816 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf3_C 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf3_B 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf3_A 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf2_D 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf2_C 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf2_B 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf2_A 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf1_C 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_pdb 3cf1_B 1 476 + 476 Gaps:29 68.73 806 75.99 0.0 mol:protein length:806 Transitional endoplasmic reticulum ATPase
blastp_uniprot_sprot sp|P54774|CDC48_SOYBN 1 505 + 505 Gaps:30 72.37 807 86.47 0.0 Cell division cycle protein 48 homolog OS Glycine max GN CDC48 PE 1 SV 1
blastp_uniprot_sprot sp|Q96372|CDC48_CAPAN 1 505 + 505 Gaps:29 72.30 805 84.88 0.0 Cell division cycle protein 48 homolog OS Capsicum annuum GN CAFP PE 2 SV 1
blastp_uniprot_sprot sp|Q9LZF6|CD48E_ARATH 1 493 + 493 Gaps:32 71.23 810 84.92 0.0 Cell division control protein 48 homolog E OS Arabidopsis thaliana GN CDC48E PE 1 SV 2
blastp_uniprot_sprot sp|Q9SCN8|CD48D_ARATH 1 505 + 505 Gaps:39 72.64 815 84.12 0.0 Cell division control protein 48 homolog D OS Arabidopsis thaliana GN CDC48D PE 1 SV 1
blastp_uniprot_sprot sp|P54609|CD48A_ARATH 1 505 + 505 Gaps:30 72.56 809 84.50 0.0 Cell division control protein 48 homolog A OS Arabidopsis thaliana GN CDC48A PE 1 SV 1
blastp_uniprot_sprot sp|Q7KN62|TERA_DROME 1 505 + 505 Gaps:30 73.03 801 72.48 0.0 Transitional endoplasmic reticulum ATPase TER94 OS Drosophila melanogaster GN TER94 PE 1 SV 1
blastp_uniprot_sprot sp|P23787|TERA_XENLA 1 476 + 476 Gaps:29 68.82 805 75.99 0.0 Transitional endoplasmic reticulum ATPase OS Xenopus laevis GN vcp PE 1 SV 3
blastp_uniprot_sprot sp|P54812|TERA2_CAEEL 1 476 + 476 Gaps:32 75.43 810 68.90 0.0 Transitional endoplasmic reticulum ATPase homolog 2 OS Caenorhabditis elegans GN cdc-48.2 PE 1 SV 2
blastp_uniprot_sprot sp|Q6GL04|TERA_XENTR 1 476 + 476 Gaps:29 68.82 805 76.17 0.0 Transitional endoplasmic reticulum ATPase OS Xenopus tropicalis GN vcp PE 2 SV 1
blastp_uniprot_sprot sp|Q7ZU99|TERA_DANRE 1 479 + 479 Gaps:29 69.11 806 75.76 0.0 Transitional endoplasmic reticulum ATPase OS Danio rerio GN vcp PE 1 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 2 188 187 SSF52540 none none IPR027417
PANTHER 1 477 477 PTHR23077 none none none
SMART 1 99 99 SM00382 none ATPases associated with a variety of cellular activities IPR003593
SMART 212 351 140 SM00382 none ATPases associated with a variety of cellular activities IPR003593
Gene3D 194 357 164 G3DSA:3.40.50.300 none none IPR027417
Gene3D 1 105 105 G3DSA:3.40.50.300 none none IPR027417
ProSitePatterns 67 85 19 PS00674 none AAA-protein family signature. IPR003960
PANTHER 1 477 477 PTHR23077:SF69 none none none
Pfam 216 349 134 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
Pfam 2 96 95 PF00004 none ATPase family associated with various cellular activities (AAA) IPR003959
Gene3D 106 188 83 G3DSA:1.10.8.60 none none none
Gene3D 358 449 92 G3DSA:1.10.8.60 none none none
SUPERFAMILY 194 462 269 SSF52540 none none IPR027417
ProSitePatterns 319 337 19 PS00674 none AAA-protein family signature. IPR003960

0 Localization

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL1_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AMVCC_444 s_1BE1VC_321 4 0 31 lod 3,2 7,4
Bourran2_2003_QTL8_peak_Bud_burst_A4 Qrob_Chr01 1 s_1AH7I_610 s_1BE1VC_321 4,6 0 28 lod 3,5 7,4
Bourran2_2007_QTL6_peak_Bud_burst_3P Qrob_Chr01 1 s_1BE1VC_321 s_1A5JRZ_890 5 0 25 lod 2,4 6
Bourran2_2014_nEpiBC_3P Qrob_Chr01 1 v_1588_550 s_1AZJRA_1600 30,48 9,48 43,98 lod 2,3642 6,3
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nSecLBD_3P Qrob_Chr08 8 s_1BN2OD_551 s_1B5AYF_599 17,17 0 43,51 lod 1,9229 4,4
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6
Bourran2_2014_nSeqBC*_A4 Qrob_Chr01 1 s_1CFE4C_2114 s_1BDNCB_819 15,25 2 28,5 lod 2,9903 8,3

0 Targeting