Protein : Qrob_P0243810.2 Q. robur
Protein Identifier  ? Qrob_P0243810.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=3) PF08263//PF13504//PF13855 - Leucine rich repeat N-terminal domain // Leucine rich repeat // Leucine rich repeat Code Enzyme  EC:2.7.11.1
Gene Prediction Quality  validated Protein length 

Sequence

Length: 199  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0019199 transmembrane receptor protein kinase activity Combining with a signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity by catalysis of the reaction: a protein + ATP = a phosphoprotein + ADP.

34 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102578494 4 194 + 191 Gaps:2 97.97 197 67.88 1e-87 LRR1 leucine rich repeat protein 1
blastp_kegg lcl|sly:101265851 4 194 + 191 Gaps:2 97.47 198 66.84 3e-85 somatic embryogenesis receptor kinase 2-like
blastp_kegg lcl|mdm:103452195 6 194 + 189 Gaps:27 95.02 221 62.86 6e-79 somatic embryogenesis receptor kinase 2-like
blastp_kegg lcl|rcu:RCOM_1437640 1 197 + 197 Gaps:1 98.51 201 63.64 5e-78 serine-threonine protein kinase plant-type putative (EC:1.3.1.74)
blastp_kegg lcl|pxb:103929041 2 194 + 193 Gaps:27 81.68 262 61.21 2e-77 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1-like
blastp_kegg lcl|cit:102621097 3 198 + 196 Gaps:5 97.57 206 60.70 8e-77 somatic embryogenesis receptor kinase 1-like
blastp_kegg lcl|fve:101297030 1 198 + 198 Gaps:26 98.65 223 56.82 2e-76 somatic embryogenesis receptor kinase 1-like
blastp_kegg lcl|cic:CICLE_v10002503mg 3 198 + 196 Gaps:5 97.57 206 60.20 2e-76 hypothetical protein
blastp_kegg lcl|fve:101311069 1 198 + 198 Gaps:25 97.38 229 56.95 3e-76 somatic embryogenesis receptor kinase 1-like
blastp_kegg lcl|cit:102613982 25 198 + 174 Gaps:1 95.63 183 65.71 3e-73 somatic embryogenesis receptor kinase 1-like
blastp_pdb 3rgz_A 46 180 + 135 Gaps:40 51.95 768 45.36 2e-11 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rgx_A 46 180 + 135 Gaps:40 51.95 768 45.36 2e-11 mol:protein length:768 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3rj0_A 46 180 + 135 Gaps:40 51.68 772 45.36 2e-11 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 3riz_A 46 180 + 135 Gaps:40 51.68 772 45.36 2e-11 mol:protein length:772 Protein BRASSINOSTEROID INSENSITIVE 1
blastp_pdb 1ogq_A 23 181 + 159 Gaps:38 65.50 313 34.15 6e-09 mol:protein length:313 POLYGALACTURONASE INHIBITING PROTEIN
blastp_uniprot_sprot sp|Q9XIC7|SERK2_ARATH 21 178 + 158 Gaps:3 24.68 628 65.16 3e-62 Somatic embryogenesis receptor kinase 2 OS Arabidopsis thaliana GN SERK2 PE 1 SV 1
blastp_uniprot_sprot sp|Q94AG2|SERK1_ARATH 20 178 + 159 Gaps:3 24.96 625 65.38 3e-60 Somatic embryogenesis receptor kinase 1 OS Arabidopsis thaliana GN SERK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q94F62|BAK1_ARATH 1 178 + 178 Gaps:8 29.27 615 57.22 3e-57 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS Arabidopsis thaliana GN BAK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SKG5|SERK4_ARATH 18 178 + 161 Gaps:7 25.81 620 59.38 9e-53 Somatic embryogenesis receptor kinase 4 OS Arabidopsis thaliana GN SERK4 PE 1 SV 2
blastp_uniprot_sprot sp|Q8LPS5|SERK5_ARATH 5 178 + 174 Gaps:7 28.79 601 50.29 3e-46 Somatic embryogenesis receptor kinase 5 OS Arabidopsis thaliana GN SERK5 PE 1 SV 2
blastp_uniprot_sprot sp|Q9LFS4|NIK1_ARATH 1 188 + 188 Gaps:12 30.41 638 40.21 1e-31 Protein NSP-INTERACTING KINASE 1 OS Arabidopsis thaliana GN NIK1 PE 1 SV 1
blastp_uniprot_sprot sp|C0LGT1|Y5129_ARATH 1 152 + 152 Gaps:1 24.63 613 43.71 1e-30 Probable LRR receptor-like serine/threonine-protein kinase At5g10290 OS Arabidopsis thaliana GN At5g10290 PE 1 SV 1
blastp_uniprot_sprot sp|Q0WVM4|Y2239_ARATH 5 189 + 185 Gaps:3 28.71 634 38.46 1e-28 Probable LRR receptor-like serine/threonine-protein kinase At2g23950 OS Arabidopsis thaliana GN At2g23950 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VYT3|Y4052_ARATH 5 189 + 185 Gaps:4 27.93 648 38.67 5e-28 Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS Arabidopsis thaliana GN At4g30520 PE 2 SV 1
blastp_uniprot_sprot sp|Q8RY65|NIK2_ARATH 21 188 + 168 Gaps:4 25.83 635 40.85 3e-26 Protein NSP-INTERACTING KINASE 2 OS Arabidopsis thaliana GN NIK2 PE 1 SV 1
rpsblast_cdd gnl|CDD|177728 23 181 + 159 Gaps:80 57.95 968 55.97 4e-20 PLN00113 PLN00113 leucine-rich repeat receptor-like protein kinase Provisional.
rpsblast_cdd gnl|CDD|178695 26 172 + 147 Gaps:7 24.08 623 33.33 5e-18 PLN03150 PLN03150 hypothetical protein Provisional.
rpsblast_cdd gnl|CDD|203890 21 60 + 40 Gaps:1 97.62 42 46.34 1e-08 pfam08263 LRRNT_2 Leucine rich repeat N-terminal domain. Leucine Rich Repeats pfam00560 are short sequence motifs present in a number of proteins with diverse functions and cellular locations. Leucine Rich Repeats are often flanked by cysteine rich domains. This domain is often found at the N-terminus of tandem leucine rich repeats.
rpsblast_kog gnl|CDD|39857 69 170 + 102 Gaps:2 11.25 889 36.00 5e-10 KOG4658 KOG4658 KOG4658 Apoptotic ATPase [Signal transduction mechanisms].
rpsblast_kog gnl|CDD|35752 85 175 + 91 Gaps:7 11.63 722 38.10 4e-08 KOG0532 KOG0532 KOG0532 Leucine-rich repeat (LRR) protein contains calponin homology domain [Cytoskeleton].

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 1 178 178 PTHR24420 none none none
Phobius 5 15 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 23 178 156 G3DSA:3.80.10.10 none none none
PANTHER 1 178 178 PTHR24420:SF727 none none IPR031048
Pfam 162 175 14 PF13504 none Leucine rich repeat IPR001611
Phobius 1 20 20 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 88 146 59 PF13855 none Leucine rich repeat IPR001611
SUPERFAMILY 24 177 154 SSF52058 none none none
Phobius 16 20 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Pfam 22 60 39 PF08263 none Leucine rich repeat N-terminal domain IPR013210
Phobius 21 198 178 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

2 Localization

Analysis Start End Length
SignalP_EUK 1 20 19
SignalP_GRAM_NEGATIVE 1 16 15

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 20   Secretory pathway 1 0.941 0.042 NON-PLANT 20