Protein : Qrob_P0241510.2 Q. robur
Protein Identifier  ? Qrob_P0241510.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=4) K03238 - translation initiation factor eIF-2 beta subunit Gene Prediction Quality  validated
Protein length 

Sequence

Length: 231  
Kegg Orthology  K03238
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0003743 translation initiation factor activity Functions in the initiation of ribosome-mediated translation of mRNA into a polypeptide.
GO:0006413 translational initiation The process preceding formation of the peptide bond between the first two amino acids of a protein. This includes the formation of a complex of the ribosome, mRNA, and an initiation complex that contains the first aminoacyl-tRNA.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|sot:102605977 7 230 + 224 Gaps:31 96.23 265 70.59 2e-113 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|sly:101243901 7 230 + 224 Gaps:31 96.23 265 70.59 3e-113 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|pda:103722171 2 230 + 229 Gaps:30 97.37 266 68.73 3e-113 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|atr:s00066p00171460 1 230 + 230 Gaps:32 97.76 268 67.56 2e-112 AMTR_s00066p00171460 hypothetical protein
blastp_kegg lcl|dosa:Os03t0333300-01 1 230 + 230 Gaps:34 97.78 270 66.67 1e-110 Os03g0333300 Similar to Eukaryotic translation initiation factor 2 beta subunit (eIF-2-beta) (P38).
blastp_kegg lcl|osa:4332744 1 230 + 230 Gaps:34 97.78 270 66.67 1e-110 Os03g0333300
blastp_kegg lcl|obr:102722473 1 230 + 230 Gaps:34 97.78 270 66.67 2e-110 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|pda:103706238 2 229 + 228 Gaps:34 97.04 270 65.27 3e-110 eukaryotic translation initiation factor 2 subunit beta
blastp_kegg lcl|vvi:100263785 2 230 + 229 Gaps:33 97.40 269 67.56 3e-110 eukaryotic translation initiation factor 2 subunit beta-like
blastp_kegg lcl|sbi:SORBI_01g036250 2 230 + 229 Gaps:36 97.43 272 66.42 3e-109 SORBIDRAFT_01g036250 Sb01g036250 hypothetical protein
blastp_pdb 2dcu_B 76 212 + 137 Gaps:5 89.19 148 40.15 1e-26 mol:protein length:148 Translation initiation factor 2 beta subunit
blastp_pdb 2d74_B 76 212 + 137 Gaps:5 89.19 148 40.15 1e-26 mol:protein length:148 Translation initiation factor 2 beta subunit
blastp_pdb 3v11_C 77 212 + 136 Gaps:5 94.93 138 32.82 6e-19 mol:protein length:138 Translation initiation factor 2 subunit beta
blastp_pdb 2qmu_C 77 212 + 136 Gaps:5 94.93 138 32.82 6e-19 mol:protein length:138 Translation initiation factor 2 beta subunit
blastp_pdb 3cw2_N 77 212 + 136 Gaps:5 94.24 139 32.82 6e-19 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 3cw2_M 77 212 + 136 Gaps:5 94.24 139 32.82 6e-19 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 3cw2_L 77 212 + 136 Gaps:5 94.24 139 32.82 6e-19 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 3cw2_K 77 212 + 136 Gaps:5 94.24 139 32.82 6e-19 mol:protein length:139 Translation initiation factor 2 subunit beta
blastp_pdb 2nxu_A 77 212 + 136 Gaps:5 89.73 146 32.82 7e-19 mol:protein length:146 Translation initiation factor 2 beta subunit
blastp_pdb 1nee_A 77 208 + 132 Gaps:6 91.30 138 34.92 1e-18 mol:protein length:138 Probable translation initiation factor 2 beta
blastp_uniprot_sprot sp|O24473|IF2B_WHEAT 1 230 + 230 Gaps:34 97.78 270 66.67 5e-112 Eukaryotic translation initiation factor 2 subunit beta OS Triticum aestivum PE 1 SV 1
blastp_uniprot_sprot sp|P55871|IF2B_MALDO 2 230 + 229 Gaps:35 97.42 271 64.02 8e-104 Eukaryotic translation initiation factor 2 subunit beta OS Malus domestica PE 2 SV 2
blastp_uniprot_sprot sp|Q41969|IF2B_ARATH 41 228 + 188 Gaps:2 70.90 268 74.74 5e-98 Eukaryotic translation initiation factor 2 subunit beta OS Arabidopsis thaliana GN EMB1401 PE 2 SV 3
blastp_uniprot_sprot sp|Q99L45|IF2B_MOUSE 66 221 + 156 Gaps:1 47.43 331 61.15 4e-67 Eukaryotic translation initiation factor 2 subunit 2 OS Mus musculus GN Eif2s2 PE 1 SV 1
blastp_uniprot_sprot sp|P20042|IF2B_HUMAN 68 221 + 154 Gaps:1 46.55 333 61.29 4e-66 Eukaryotic translation initiation factor 2 subunit 2 OS Homo sapiens GN EIF2S2 PE 1 SV 2
blastp_uniprot_sprot sp|Q5E9D0|IF2B_BOVIN 68 221 + 154 Gaps:1 46.55 333 61.29 4e-66 Eukaryotic translation initiation factor 2 subunit 2 OS Bos taurus GN EIF2S2 PE 2 SV 1
blastp_uniprot_sprot sp|P41035|IF2B_RABIT 68 221 + 154 Gaps:1 46.55 333 61.29 5e-66 Eukaryotic translation initiation factor 2 subunit 2 OS Oryctolagus cuniculus GN EIF2S2 PE 1 SV 1
blastp_uniprot_sprot sp|P56329|IF2B_SCHPO 66 227 + 162 Gaps:1 50.16 321 59.63 5e-66 Probable eukaryotic translation initiation factor 2 subunit beta OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN tif212 PE 1 SV 2
blastp_uniprot_sprot sp|P41375|IF2B_DROME 67 228 + 162 Gaps:1 52.24 312 58.90 1e-65 Eukaryotic translation initiation factor 2 subunit 2 OS Drosophila melanogaster GN eIF-2beta PE 1 SV 1
blastp_uniprot_sprot sp|Q5R4T9|IF2B_PONAB 68 221 + 154 Gaps:1 46.55 333 60.65 2e-65 Eukaryotic translation initiation factor 2 subunit 2 OS Pongo abelii GN EIF2S2 PE 2 SV 1

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 179 213 35 SSF75689 none none IPR016190
SMART 100 209 110 SM00653 none domain present in translation initiation factor eIF2B and eIF5 IPR002735
PANTHER 2 228 227 PTHR23001 none none none
Pfam 91 210 120 PF01873 none Domain found in IF2B/IF5 IPR002735
Gene3D 110 161 52 G3DSA:3.30.30.50 none none IPR016189
SUPERFAMILY 75 182 108 SSF100966 none none IPR016189

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5

0 Targeting