Protein : Qrob_P0241180.2 Q. robur
Protein Identifier  ? Qrob_P0241180.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) PTHR10774:SF51 - C2 CALCIUM/LIPID-BINDING ENDONUCLEASE/EXONUCLEASE/PHOSPHATASE-RELATED (PTHR10774:SF51) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 181  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006355 regulation of transcription, DNA-templated Any process that modulates the frequency, rate or extent of cellular DNA-templated transcription.
GO:0006950 response to stress Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102611044 2 178 + 177 Gaps:1 34.77 512 82.02 3e-82 synaptotagmin-5-like
blastp_kegg lcl|gmx:100783641 2 175 + 174 Gaps:13 35.44 522 74.05 4e-81 synaptotagmin-5-like
blastp_kegg lcl|mdm:103441551 2 178 + 177 Gaps:26 37.87 536 71.92 1e-80 synaptotagmin-5
blastp_kegg lcl|pxb:103967724 2 178 + 177 Gaps:37 39.12 547 68.69 5e-79 synaptotagmin-5
blastp_kegg lcl|gmx:100785209 2 178 + 177 Gaps:24 37.57 535 66.67 2e-78 synaptotagmin-5-like
blastp_kegg lcl|vvi:100265985 2 178 + 177 Gaps:3 35.09 513 79.44 1e-77 tricalbin-1-like
blastp_kegg lcl|pmum:103331928 2 178 + 177 Gaps:26 37.87 536 69.46 1e-77 synaptotagmin-5
blastp_kegg lcl|mtr:MTR_7g075790 2 175 + 174 Gaps:4 31.45 566 73.60 2e-76 Extended synaptotagmin-2-A
blastp_kegg lcl|atr:s00001p00267880 2 158 + 157 none 30.91 508 77.71 4e-76 AMTR_s00001p00267880 hypothetical protein
blastp_kegg lcl|sot:102582690 2 178 + 177 Gaps:4 35.28 513 75.14 6e-75 synaptotagmin-4-like

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 2 82 81 PTHR10774 none none none
Gene3D 2 60 59 G3DSA:2.60.40.150 none none IPR000008
Coils 61 89 29 Coil none none none
PANTHER 2 82 81 PTHR10774:SF51 none none IPR031069

2 Localization

Analysis Start End Length
TMHMM 100 122 22
TMHMM 126 145 19

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1

0 Targeting