Protein : Qrob_P0239060.2 Q. robur
Protein Identifier  ? Qrob_P0239060.2 Organism . Name  Quercus robur
Score  81.0 Score Type  egn
Protein Description  (M=1) PTHR23323:SF24 - VACUOLAR MEMBRANE PROTEIN PEP5, 11 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 963  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0016192 vesicle-mediated transport A cellular transport process in which transported substances are moved in membrane-bounded vesicles; transported substances are enclosed in the vesicle lumen or located in the vesicle membrane. The process begins with a step that directs a substance to the forming vesicle, and includes vesicle budding and coating. Vesicles are then targeted to, and fuse with, an acceptor membrane.

24 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0014s16330g 1 959 + 959 Gaps:26 99.90 962 87.30 0.0 POPTRDRAFT_898776 vacuolar protein sorting 11
blastp_kegg lcl|tcc:TCM_002337 1 959 + 959 Gaps:27 90.91 1056 87.40 0.0 Vacuolar protein sorting 11 isoform 1
blastp_kegg lcl|vvi:100266606 1 959 + 959 Gaps:32 99.90 960 86.34 0.0 vacuolar protein sorting-associated protein 11 homolog
blastp_kegg lcl|rcu:RCOM_0416040 1 948 + 948 Gaps:30 98.75 962 86.42 0.0 expressed protein putative
blastp_kegg lcl|pper:PRUPE_ppa019444mg 1 946 + 946 Gaps:26 100.00 948 86.71 0.0 hypothetical protein
blastp_kegg lcl|pmum:103329241 1 948 + 948 Gaps:26 99.89 951 86.63 0.0 vacuolar protein-sorting-associated protein 11 homolog
blastp_kegg lcl|fve:101295110 1 950 + 950 Gaps:27 100.00 945 85.61 0.0 vacuolar protein sorting-associated protein 11 homolog
blastp_kegg lcl|pxb:103955067 1 948 + 948 Gaps:28 99.90 953 85.82 0.0 vacuolar protein-sorting-associated protein 11 homolog
blastp_kegg lcl|pxb:103935437 1 948 + 948 Gaps:28 99.90 953 85.50 0.0 vacuolar protein-sorting-associated protein 11 homolog
blastp_kegg lcl|cic:CICLE_v10018207mg 1 950 + 950 Gaps:28 99.79 944 85.99 0.0 hypothetical protein
blastp_uniprot_sprot sp|Q9H270|VPS11_HUMAN 3 942 + 940 Gaps:100 96.28 941 41.94 0.0 Vacuolar protein sorting-associated protein 11 homolog OS Homo sapiens GN VPS11 PE 1 SV 1
blastp_uniprot_sprot sp|Q91W86|VPS11_MOUSE 3 942 + 940 Gaps:94 96.28 941 41.83 0.0 Vacuolar protein sorting-associated protein 11 homolog OS Mus musculus GN Vps11 PE 1 SV 3
blastp_uniprot_sprot sp|Q54YP4|VPS11_DICDI 1 939 + 939 Gaps:169 100.00 952 39.92 0.0 Vacuolar protein sorting-associated protein 11 homolog OS Dictyostelium discoideum GN vps11 PE 3 SV 1
blastp_uniprot_sprot sp|Q09600|VPS11_CAEEL 2 938 + 937 Gaps:136 89.69 980 26.28 8e-60 Vacuolar protein sorting-associated protein 11 homolog OS Caenorhabditis elegans GN vps-11 PE 3 SV 2
blastp_uniprot_sprot sp|Q9P6N4|PEP5_SCHPO 162 891 + 730 Gaps:159 84.44 906 25.62 1e-43 Vacuolar membrane protein pep5 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pep5 PE 3 SV 1
blastp_uniprot_sprot sp|P12868|PEP5_YEAST 162 939 + 778 Gaps:177 85.62 1029 24.29 2e-31 Vacuolar membrane protein PEP5 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN PEP5 PE 1 SV 2
blastp_uniprot_sprot sp|Q8I480|ZNRF2_PLAF7 344 940 + 597 Gaps:11 25.63 1272 31.29 2e-21 RING finger protein PFE0100w OS Plasmodium falciparum (isolate 3D7) GN PFE0100w PE 4 SV 1
blastp_uniprot_sprot sp|P59015|VPS18_DANRE 384 881 + 498 Gaps:109 46.71 974 25.49 1e-08 Vacuolar protein sorting-associated protein 18 homolog OS Danio rerio GN vps18 PE 2 SV 2
blastp_uniprot_sprot sp|O74925|PEP3_SCHPO 378 895 + 518 Gaps:117 54.33 900 26.58 6e-08 Vacuolar membrane protein pep3 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pep3 PE 3 SV 1
rpsblast_cdd gnl|CDD|204923 892 940 + 49 none 100.00 49 38.78 2e-10 pfam12451 VPS11_C Vacuolar protein sorting protein 11 C terminal. This domain family is found in eukaryotes and is approximately 50 amino acids in length. Vps 11 is one of the evolutionarily conserved class C vacuolar protein sorting genes (c-vps: vps11 vps16 vps18 and vps33) whose products physically associate to form the c-vps protein complex required for vesicle docking and fusion.
rpsblast_cdd gnl|CDD|201364 412 554 + 143 Gaps:10 94.41 143 25.19 1e-07 pfam00637 Clathrin Region in Clathrin and VPS. Each region is about 140 amino acids long. The regions are composed of multiple alpha helical repeats. They occur in the arm region of the Clathrin heavy chain.
rpsblast_kog gnl|CDD|37325 1 941 + 941 Gaps:68 99.36 933 44.98 0.0 KOG2114 KOG2114 KOG2114 Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37245 384 913 + 530 Gaps:98 53.57 911 20.90 5e-14 KOG2034 KOG2034 KOG2034 Vacuolar sorting protein PEP3/VPS18 [Intracellular trafficking secretion and vesicular transport].
rpsblast_kog gnl|CDD|37277 337 881 + 545 Gaps:119 56.03 846 22.78 5e-07 KOG2066 KOG2066 KOG2066 Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking secretion and vesicular transport].

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 39 128 90 G3DSA:2.130.10.10 none none IPR015943
Gene3D 199 255 57 G3DSA:2.130.10.10 none none IPR015943
PANTHER 660 938 279 PTHR23323:SF24 none none IPR016528
Gene3D 847 901 55 G3DSA:3.30.40.10 none none IPR013083
ProSiteProfiles 856 891 36 PS50089 none Zinc finger RING-type profile. IPR001841
ProSiteProfiles 405 556 152 PS50236 none Clathrin heavy-chain (CHCR) repeat profile. IPR000547
SUPERFAMILY 33 312 280 SSF50978 none none IPR017986
PANTHER 660 938 279 PTHR23323 none none none
PANTHER 1 630 630 PTHR23323 none none none
Pfam 892 939 48 PF12451 none Vacuolar protein sorting protein 11 C terminal IPR024763
SUPERFAMILY 855 896 42 SSF57850 none none none
Gene3D 358 403 46 G3DSA:1.25.40.10 none none IPR011990
Gene3D 603 633 31 G3DSA:1.25.40.10 none none IPR011990
Gene3D 705 732 28 G3DSA:1.25.40.10 none none IPR011990
Gene3D 493 524 32 G3DSA:1.25.40.10 none none IPR011990
ProSiteProfiles 566 770 205 PS50236 none Clathrin heavy-chain (CHCR) repeat profile. IPR000547
PANTHER 1 630 630 PTHR23323:SF24 none none IPR016528
Coils 810 848 39 Coil none none none
Pfam 412 534 123 PF00637 none Region in Clathrin and VPS IPR000547

0 Localization

0 Qtllist

0 Targeting