Protein : Qrob_P0235780.2 Q. robur
Protein Identifier  ? Qrob_P0235780.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR12210:SF5 - GB DEF: HYPOTHETICAL PROTEIN F27K19_140 (HYPOTHETICAL PROTEIN AT3G55960) Code Enzyme  EC:3.1.3.16
Gene Prediction Quality  validated Protein length 

Sequence

Length: 300  
Kegg Orthology  K15731
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0016791 phosphatase activity Catalysis of the hydrolysis of phosphoric monoesters, releasing inorganic phosphate.

36 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_042494 1 299 + 299 Gaps:8 99.03 310 79.80 1e-162 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein isoform 1
blastp_kegg lcl|cic:CICLE_v10031856mg 1 299 + 299 Gaps:10 79.73 375 81.94 7e-159 hypothetical protein
blastp_kegg lcl|cit:102628931 1 299 + 299 Gaps:10 79.73 375 81.94 7e-159 CTD small phosphatase-like protein-like
blastp_kegg lcl|cmo:103501444 1 297 + 297 Gaps:3 98.99 297 77.21 3e-157 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1
blastp_kegg lcl|sly:101252994 1 299 + 299 Gaps:14 98.37 306 74.42 7e-156 CTD small phosphatase-like protein 2-like
blastp_kegg lcl|csv:101212176 1 297 + 297 Gaps:3 98.99 297 76.19 6e-155 CTD small phosphatase-like protein 2-like
blastp_kegg lcl|sot:102600526 1 299 + 299 Gaps:17 98.40 313 72.73 4e-154 CTD small phosphatase-like protein 2-like
blastp_kegg lcl|mdm:103437342 1 299 + 299 Gaps:2 99.34 301 81.27 5e-154 CTD small phosphatase-like protein
blastp_kegg lcl|pxb:103936809 1 299 + 299 Gaps:2 99.34 301 80.94 8e-154 carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1-like
blastp_kegg lcl|aly:ARALYDRAFT_907030 1 298 + 298 Gaps:6 98.68 304 72.33 9e-154 NLI interacting factor family protein
blastp_pdb 1t9z_A 90 280 + 191 Gaps:22 85.79 197 41.42 6e-21 mol:protein length:197 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 3pgl_B 91 280 + 190 Gaps:22 93.33 180 41.67 7e-21 mol:protein length:180 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 3pgl_A 91 280 + 190 Gaps:22 93.33 180 41.67 7e-21 mol:protein length:180 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 1ta0_A 90 280 + 191 Gaps:22 85.79 197 41.42 1e-20 mol:protein length:197 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 2ght_B 91 280 + 190 Gaps:22 92.82 181 41.07 3e-20 mol:protein length:181 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 2ght_A 91 280 + 190 Gaps:22 92.82 181 41.07 3e-20 mol:protein length:181 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 2ghq_B 91 280 + 190 Gaps:22 92.82 181 41.07 3e-20 mol:protein length:181 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 2ghq_A 91 280 + 190 Gaps:22 92.82 181 41.07 3e-20 mol:protein length:181 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 3l0y_B 91 280 + 190 Gaps:22 91.30 184 41.07 7e-20 mol:protein length:184 Carboxy-terminal domain RNA polymerase II pol
blastp_pdb 3l0y_A 91 280 + 190 Gaps:22 91.30 184 41.07 7e-20 mol:protein length:184 Carboxy-terminal domain RNA polymerase II pol
blastp_uniprot_sprot sp|Q54GB2|CTSL2_DICDI 89 286 + 198 Gaps:24 31.04 567 38.07 2e-20 CTD small phosphatase-like protein 2 OS Dictyostelium discoideum GN ctdspl2 PE 3 SV 1
blastp_uniprot_sprot sp|Q9GZU7|CTDS1_HUMAN 55 282 + 228 Gaps:33 77.01 261 39.30 3e-20 Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS Homo sapiens GN CTDSP1 PE 1 SV 1
blastp_uniprot_sprot sp|P58466|CTDS1_MOUSE 55 282 + 228 Gaps:33 77.01 261 38.81 1e-19 Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 OS Mus musculus GN Ctdsp1 PE 1 SV 1
blastp_uniprot_sprot sp|Q09695|YA22_SCHPO 94 280 + 187 Gaps:22 50.77 325 37.58 8e-19 Uncharacterized protein C2F7.02c OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC2F7.02c PE 1 SV 1
blastp_uniprot_sprot sp|Q9VRG7|CNEP1_DROME 93 286 + 194 Gaps:13 74.49 243 35.36 2e-18 CTD nuclear envelope phosphatase 1 homolog OS Drosophila melanogaster GN Dd PE 2 SV 1
blastp_uniprot_sprot sp|Q29I63|CNEP1_DROPS 93 286 + 194 Gaps:13 74.49 243 35.36 2e-18 CTD nuclear envelope phosphatase 1 homolog OS Drosophila pseudoobscura pseudoobscura GN l(1)G0269 PE 3 SV 1
blastp_uniprot_sprot sp|Q9PTJ6|CTDSL_CHICK 94 282 + 189 Gaps:24 60.73 275 36.53 2e-18 CTD small phosphatase-like protein OS Gallus gallus GN NFI1 PE 2 SV 2
blastp_uniprot_sprot sp|P58465|CTDSL_MOUSE 94 281 + 188 Gaps:24 60.14 276 36.75 4e-18 CTD small phosphatase-like protein OS Mus musculus GN Ctdspl PE 2 SV 3
blastp_uniprot_sprot sp|O15194|CTDSL_HUMAN 94 281 + 188 Gaps:24 60.14 276 36.75 4e-18 CTD small phosphatase-like protein OS Homo sapiens GN CTDSPL PE 1 SV 2
blastp_uniprot_sprot sp|Q8BX07|CTDS2_MOUSE 31 280 + 250 Gaps:28 84.44 270 35.09 2e-17 Carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 2 OS Mus musculus GN Ctdsp2 PE 2 SV 1

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 18 108 91 PTHR12210 none none none
Gene3D 89 280 192 G3DSA:3.40.50.1000 none none IPR023214
TIGRFAM 94 279 186 TIGR02251 none HIF-SF_euk: dullard-like phosphatase domain IPR011948
Phobius 21 40 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSiteProfiles 90 270 181 PS50969 none FCP1 homology domain profile. IPR004274
Phobius 41 299 259 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 18 108 91 PTHR12210:SF5 none none none
PANTHER 137 296 160 PTHR12210:SF5 none none none
PANTHER 137 296 160 PTHR12210 none none none
Phobius 1 20 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
SMART 93 257 165 SM00577 none catalytic domain of ctd-like phosphatases IPR004274
SUPERFAMILY 91 281 191 SSF56784 none none IPR023214
Pfam 95 277 183 PF03031 none NLI interacting factor-like phosphatase IPR004274

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpiBC_3P Qrob_Chr12 12 s_1B73S5_217 v_7050_211 28,31 26,37 28,45 lod 4.5 11.6

0 Targeting