Protein : Qrob_P0231420.2 Q. robur
Protein Identifier  ? Qrob_P0231420.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=2) K05298 - glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13] Code Enzyme  EC:1.2.1.13
Gene Prediction Quality  validated Protein length 

Sequence

Length: 403  
Kegg Orthology  K05298
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0051287 NAD binding Interacting selectively and non-covalently with nicotinamide adenine dinucleotide, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NAD+, or the reduced form, NADH.
GO:0050661 NADP binding Interacting selectively and non-covalently with nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.
GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor Catalysis of an oxidation-reduction (redox) reaction in which an aldehyde or ketone (oxo) group acts as a hydrogen or electron donor and reduces NAD or NADP.
GO:0006006 glucose metabolic process The chemical reactions and pathways involving glucose, the aldohexose gluco-hexose. D-glucose is dextrorotatory and is sometimes known as dextrose; it is an important source of energy for living organisms and is found free as well as combined in homo- and hetero-oligosaccharides and polysaccharides.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|mdm:103442070 1 402 + 402 Gaps:1 100.00 403 92.31 0.0 glyceraldehyde-3-phosphate dehydrogenase A chloroplastic
blastp_kegg lcl|pxb:103936989 1 402 + 402 Gaps:1 100.00 403 91.81 0.0 GDPHa glyceraldehyde-3-phosphate dehydrogenase A chloroplastic (EC:1.2.1.13)
blastp_kegg lcl|pper:PRUPE_ppa006610mg 1 402 + 402 Gaps:1 100.00 403 90.82 0.0 hypothetical protein
blastp_kegg lcl|pmum:103330412 1 402 + 402 Gaps:1 100.00 403 90.82 0.0 glyceraldehyde-3-phosphate dehydrogenase A chloroplastic
blastp_kegg lcl|pxb:103966613 1 402 + 402 Gaps:1 100.00 403 91.07 0.0 glyceraldehyde-3-phosphate dehydrogenase A chloroplastic
blastp_kegg lcl|mdm:103425757 1 402 + 402 Gaps:1 100.00 403 91.32 0.0 glyceraldehyde-3-phosphate dehydrogenase A chloroplastic
blastp_kegg lcl|tcc:TCM_017432 1 402 + 402 Gaps:2 100.00 404 91.58 0.0 Glyceraldehyde 3-phosphate dehydrogenase A subunit 2
blastp_kegg lcl|csv:101227812 1 402 + 402 Gaps:1 100.00 403 91.07 0.0 glyceraldehyde-3-phosphate dehydrogenase A chloroplastic-like
blastp_kegg lcl|cmo:103491694 1 402 + 402 Gaps:2 100.00 404 91.34 0.0 glyceraldehyde-3-phosphate dehydrogenase A chloroplastic
blastp_kegg lcl|csv:101202856 1 402 + 402 Gaps:1 100.00 403 90.82 0.0 glyceraldehyde-3-phosphate dehydrogenase A chloroplastic-like
blastp_pdb 2pkq_S 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 2pkq_R 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 2pkq_P 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 2hki_A 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 Glyceraldehyde-3-phosphate dehydrogenase A c
blastp_pdb 1rm4_B 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 Glyceraldehyde 3-phosphate dehydrogenase A
blastp_pdb 1rm4_A 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 Glyceraldehyde 3-phosphate dehydrogenase A
blastp_pdb 1rm4_O 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 Glyceraldehyde 3-phosphate dehydrogenase A
blastp_pdb 1nbo_B 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 1nbo_A 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 glyceraldehyde-3-phosphate dehydrogenase A
blastp_pdb 1nbo_O 67 402 + 336 none 99.70 337 89.88 0.0 mol:protein length:337 glyceraldehyde-3-phosphate dehydrogenase A
blastp_uniprot_sprot sp|P12858|G3PA_PEA 1 402 + 402 Gaps:3 100.00 405 88.15 0.0 Glyceraldehyde-3-phosphate dehydrogenase A chloroplastic OS Pisum sativum GN GAPA PE 2 SV 2
blastp_uniprot_sprot sp|P19866|G3PA_SPIOL 1 402 + 402 Gaps:3 100.00 401 84.29 0.0 Glyceraldehyde-3-phosphate dehydrogenase A chloroplastic OS Spinacia oleracea GN GAPA PE 1 SV 2
blastp_uniprot_sprot sp|P25856|G3PA1_ARATH 1 402 + 402 Gaps:10 100.00 396 88.38 0.0 Glyceraldehyde-3-phosphate dehydrogenase GAPA1 chloroplastic OS Arabidopsis thaliana GN GAPA1 PE 1 SV 3
blastp_uniprot_sprot sp|Q9LPW0|G3PA2_ARATH 1 402 + 402 Gaps:5 100.00 399 86.97 0.0 Glyceraldehyde 3-phosphate dehydrogenase GAPA2 chloroplastic OS Arabidopsis thaliana GN GAPA2 PE 2 SV 1
blastp_uniprot_sprot sp|P09043|G3PA_TOBAC 12 402 + 391 Gaps:1 99.49 392 86.15 0.0 Glyceraldehyde-3-phosphate dehydrogenase A chloroplastic (Fragment) OS Nicotiana tabacum GN GAPA PE 1 SV 1
blastp_uniprot_sprot sp|P09315|G3PA_MAIZE 1 402 + 402 Gaps:5 100.00 403 83.87 0.0 Glyceraldehyde-3-phosphate dehydrogenase A chloroplastic OS Zea mays GN GAPA PE 2 SV 1
blastp_uniprot_sprot sp|P09044|G3PB_TOBAC 21 401 + 381 Gaps:6 87.44 438 76.50 0.0 Glyceraldehyde-3-phosphate dehydrogenase B chloroplastic (Fragment) OS Nicotiana tabacum GN GAPB PE 1 SV 1
blastp_uniprot_sprot sp|P25857|G3PB_ARATH 21 401 + 381 Gaps:11 85.01 447 75.26 0.0 Glyceraldehyde-3-phosphate dehydrogenase GAPB chloroplastic OS Arabidopsis thaliana GN GAPB PE 1 SV 2
blastp_uniprot_sprot sp|P12859|G3PB_PEA 22 401 + 380 Gaps:6 85.14 451 75.52 0.0 Glyceraldehyde-3-phosphate dehydrogenase B chloroplastic OS Pisum sativum GN GAPB PE 1 SV 2
blastp_uniprot_sprot sp|P12860|G3PB_SPIOL 21 401 + 381 Gaps:7 84.70 451 73.82 0.0 Glyceraldehyde-3-phosphate dehydrogenase B chloroplastic OS Spinacia oleracea GN GAPB PE 1 SV 1

17 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 228 382 155 G3DSA:3.30.360.10 none none none
Pfam 224 380 157 PF02800 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain IPR020829
PANTHER 65 402 338 PTHR10836 "Reactome:REACT_474";signature_desc=GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE none IPR020831
PIRSF 66 402 337 PIRSF000149 "Reactome:REACT_474" none IPR020831
SMART 68 219 152 SM00846 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828
TIGRFAM 69 392 324 TIGR01534 "KEGG:00010+1.2.1.12","KEGG:00710+1.2.1.12","MetaCyc:PWY-1042","MetaCyc:PWY-5484","MetaCyc:PWY-6901","MetaCyc:PWY-7003","Reactome:REACT_474","UniPathway:UPA00109" GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I IPR006424
PRINTS 296 313 18 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 213 231 19 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 177 190 14 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 336 351 16 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
PRINTS 240 256 17 PR00078 "Reactome:REACT_474" Glyceraldehyde-3-phosphate dehydrogenase signature IPR020831
SUPERFAMILY 219 381 163 SSF55347 none none none
PANTHER 65 402 338 PTHR10836:SF38 none none none
ProSitePatterns 217 224 8 PS00071 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase active site. IPR020830
Gene3D 67 227 161 G3DSA:3.40.50.720 none none IPR016040
SUPERFAMILY 67 235 169 SSF51735 none none none
Pfam 69 219 151 PF00044 "Reactome:REACT_474" Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain IPR020828

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 28   Mitochondrion 5 0.039 0.653 NON-PLANT 28