Protein : Qrob_P0230960.2 Q. robur
Protein Identifier  ? Qrob_P0230960.2 Organism . Name  Quercus robur
Score  99.0 Score Type  egn
Protein Description  (M=5) PTHR11654:SF76 - PROTEIN NRT1/ PTR FAMILY 8.1-RELATED (PTHR11654:SF76) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 576  
Kegg Orthology  K14638
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005215 transporter activity Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO:0006810 transport The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO:0006857 oligopeptide transport The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.

30 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_011173 7 574 + 568 none 97.26 584 87.68 0.0 Peptide transporter 2 isoform 1
blastp_kegg lcl|cic:CICLE_v10014643mg 6 574 + 569 none 93.74 607 86.29 0.0 hypothetical protein
blastp_kegg lcl|cit:102611745 6 574 + 569 none 97.43 584 86.29 0.0 peptide transporter PTR2-like
blastp_kegg lcl|csv:101212257 7 575 + 569 none 97.10 586 84.71 0.0 peptide transporter PTR2-like
blastp_kegg lcl|cmo:103504109 7 575 + 569 none 96.93 587 84.71 0.0 protein NRT1/ PTR FAMILY 8.3
blastp_kegg lcl|mdm:103451501 3 575 + 573 none 93.78 611 85.17 0.0 protein NRT1/ PTR FAMILY 8.3-like
blastp_kegg lcl|rcu:RCOM_0776160 8 575 + 568 none 97.09 585 84.68 0.0 peptide transporter putative
blastp_kegg lcl|vvi:100255930 7 575 + 569 none 97.10 586 87.17 0.0 peptide transporter PTR2-like
blastp_kegg lcl|pop:POPTR_0010s11050g 8 574 + 567 none 97.09 584 85.36 0.0 POPTRDRAFT_805077 Peptide transporter PTR2-B family protein
blastp_kegg lcl|cam:101496346 7 575 + 569 none 97.43 584 83.48 0.0 peptide transporter PTR2-like
blastp_pdb 2xut_C 37 572 + 536 Gaps:64 95.04 524 28.11 5e-33 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_pdb 2xut_B 37 572 + 536 Gaps:64 95.04 524 28.11 5e-33 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_pdb 2xut_A 37 572 + 536 Gaps:64 95.04 524 28.11 5e-33 mol:protein length:524 PROTON/PEPTIDE SYMPORTER FAMILY PROTEIN
blastp_uniprot_sprot sp|P46032|PTR2_ARATH 13 575 + 563 none 96.24 585 76.91 0.0 Protein NRT1/ PTR FAMILY 8.3 OS Arabidopsis thaliana GN NPF8.3 PE 1 SV 1
blastp_uniprot_sprot sp|Q93Z20|PTR17_ARATH 5 574 + 570 Gaps:17 96.78 590 65.32 0.0 Protein NRT1/ PTR FAMILY 8.5 OS Arabidopsis thaliana GN NPF8.5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9M390|PTR1_ARATH 10 574 + 565 Gaps:3 98.95 570 62.94 0.0 Protein NRT1/ PTR FAMILY 8.1 OS Arabidopsis thaliana GN NPF8.1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LFB8|PTR5_ARATH 15 575 + 561 Gaps:4 98.07 570 62.61 0.0 Protein NRT1/ PTR FAMILY 8.2 OS Arabidopsis thaliana GN NPF8.2 PE 2 SV 1
blastp_uniprot_sprot sp|Q84WG0|PTR26_ARATH 7 573 + 567 Gaps:41 96.88 545 66.67 0.0 Protein NRT1/ PTR FAMILY 8.4 OS Arabidopsis thaliana GN NPF8.4 PE 2 SV 2
blastp_uniprot_sprot sp|Q9LQL2|PTR14_ARATH 7 570 + 564 Gaps:9 93.00 614 44.48 6e-174 Protein NRT1/ PTR FAMILY 7.3 OS Arabidopsis thaliana GN NPF7.3 PE 1 SV 2
blastp_uniprot_sprot sp|Q9SX20|PTR18_ARATH 9 572 + 564 Gaps:7 95.13 596 45.68 1e-165 Protein NRT1/ PTR FAMILY 3.1 OS Arabidopsis thaliana GN NPF3.1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FNL7|PTR3_ARATH 9 552 + 544 Gaps:13 92.96 582 44.73 9e-165 Protein NRT1/ PTR FAMILY 5.2 OS Arabidopsis thaliana GN NPF5.2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZR7|PTR30_ARATH 10 572 + 563 Gaps:13 95.03 583 44.77 5e-164 Protein NRT1/ PTR FAMILY 5.1 OS Arabidopsis thaliana GN NPF5.1 PE 2 SV 2
blastp_uniprot_sprot sp|Q8GXN2|PTR47_ARATH 16 574 + 559 Gaps:15 95.76 589 43.97 2e-157 Protein NRT1/ PTR FAMILY 7.2 OS Arabidopsis thaliana GN NPF7.2 PE 2 SV 2
rpsblast_cdd gnl|CDD|144446 104 508 + 405 Gaps:39 100.00 372 40.86 8e-96 pfam00854 PTR2 POT family. The POT (proton-dependent oligopeptide transport) family all appear to be proton dependent transporters.
rpsblast_cdd gnl|CDD|32918 37 535 + 499 Gaps:65 89.96 498 26.79 4e-42 COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism].
rpsblast_cdd gnl|CDD|162112 53 518 + 466 Gaps:75 64.53 654 36.73 6e-40 TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics the antitumor agent bestatin and various protease inhibitors).
rpsblast_cdd gnl|CDD|162111 42 413 + 372 Gaps:47 69.68 475 25.08 1e-17 TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter) bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters although they are found in yeast plants and animals. They function by proton symport in a 1:1 stoichiometry which is variable in different species. All of them are predicted to contain 12 transmembrane domains for which limited experimental evidence exists.
rpsblast_cdd gnl|CDD|185359 29 240 + 212 Gaps:24 38.13 493 27.13 6e-11 PRK15462 PRK15462 dipeptide/tripeptide permease D Provisional.
rpsblast_cdd gnl|CDD|181969 37 237 + 201 Gaps:24 35.40 500 28.25 8e-08 PRK09584 tppB putative tripeptide transporter permease Reviewed.
rpsblast_kog gnl|CDD|36451 8 573 + 566 Gaps:21 98.60 571 49.73 0.0 KOG1237 KOG1237 KOG1237 H+/oligopeptide symporter [Amino acid transport and metabolism].

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 239 336 98 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 214 218 5 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 191 213 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 546 565 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 376 398 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 357 375 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 47 238 192 G3DSA:1.20.1250.20 none none none
Phobius 527 545 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 510 526 17 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 1 103 103 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 566 575 10 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 8 573 566 PTHR11654:SF76 none none none
PANTHER 8 573 566 PTHR11654 "Reactome:REACT_15518","Reactome:REACT_19419";signature_desc=OLIGOPEPTIDE TRANSPORTER-RELATED none IPR000109
Phobius 337 356 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 419 439 21 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 146 165 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 104 126 23 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 219 238 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 127 145 19 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 440 469 30 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 313 573 261 SSF103473 none none IPR020846
SUPERFAMILY 33 249 217 SSF103473 none none IPR020846
ProSitePatterns 93 117 25 PS01022 "Reactome:REACT_15518","Reactome:REACT_19419" PTR2 family proton/oligopeptide symporters signature 1. IPR018456
Phobius 470 489 20 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 192 204 13 PS01023 "Reactome:REACT_15518","Reactome:REACT_19419" PTR2 family proton/oligopeptide symporters signature 2. IPR018456
Phobius 166 190 25 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 399 418 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 490 509 20 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Pfam 104 507 404 PF00854 "Reactome:REACT_15518","Reactome:REACT_19419" POT family IPR000109

10 Localization

Analysis Start End Length
TMHMM 217 239 22
TMHMM 337 356 19
TMHMM 502 524 22
TMHMM 106 128 22
TMHMM 544 566 22
TMHMM 148 170 22
TMHMM 419 441 22
TMHMM 376 398 22
TMHMM 467 489 22
TMHMM 191 213 22

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

0 Targeting