Protein : Qrob_P0229820.2 Q. robur
Protein Identifier  ? Qrob_P0229820.2 Organism . Name  Quercus robur
Score  96.0 Score Type  egn
Protein Description  (M=1) PTHR11183//PTHR11183:SF40 - GLYCOGENIN // SUBFAMILY NOT NAMED Code Enzyme  EC:2.4.1.17
Gene Prediction Quality  validated Protein length 

Sequence

Length: 296  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016757 transferase activity, transferring glycosyl groups Catalysis of the transfer of a glycosyl group from one compound (donor) to another (acceptor).

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102608647 1 293 + 293 Gaps:8 52.01 548 78.95 6e-128 putative glucuronosyltransferase PGSIP6-like
blastp_kegg lcl|gmx:100810905 8 294 + 287 Gaps:12 57.07 552 72.06 4e-127 putative glucuronosyltransferase PGSIP6-like
blastp_kegg lcl|csv:101204578 30 294 + 265 Gaps:9 49.36 545 83.27 2e-126 putative glucuronosyltransferase PGSIP6-like
blastp_kegg lcl|tcc:TCM_026135 11 290 + 280 Gaps:13 53.73 536 78.82 1e-124 Plant glycogenin-like starch initiation protein 6 isoform 1
blastp_kegg lcl|gmx:100813990 22 292 + 271 Gaps:10 54.90 541 74.75 2e-124 putative glucuronosyltransferase PGSIP6-like
blastp_kegg lcl|cmo:103485833 30 294 + 265 Gaps:9 49.27 546 82.16 1e-123 putative glucuronosyltransferase PGSIP6
blastp_kegg lcl|sly:101248962 29 294 + 266 Gaps:8 50.66 533 81.11 1e-122 putative glucuronosyltransferase PGSIP6-like
blastp_kegg lcl|eus:EUTSA_v10013196mg 1 294 + 294 Gaps:7 58.15 540 71.66 2e-122 hypothetical protein
blastp_kegg lcl|pvu:PHAVU_007G116100g 11 292 + 282 Gaps:13 51.54 551 75.35 3e-122 hypothetical protein
blastp_kegg lcl|cam:101490585 12 293 + 282 Gaps:12 52.93 546 74.74 6e-122 putative glucuronosyltransferase PGSIP6-like
blastp_pdb 3u2w_B 29 194 + 166 Gaps:11 65.78 263 33.53 6e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2w_A 29 194 + 166 Gaps:11 65.78 263 33.53 6e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3qvb_A 29 194 + 166 Gaps:11 65.78 263 33.53 6e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3q4s_A 29 194 + 166 Gaps:11 65.78 263 33.53 6e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2x_B 29 194 + 166 Gaps:11 65.78 263 33.53 7e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2x_A 29 194 + 166 Gaps:11 65.78 263 33.53 7e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2v_B 29 194 + 166 Gaps:11 65.78 263 33.53 7e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2v_A 29 194 + 166 Gaps:11 65.78 263 33.53 7e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2u_B 29 194 + 166 Gaps:11 65.78 263 33.53 7e-20 mol:protein length:263 Glycogenin-1
blastp_pdb 3u2u_A 29 194 + 166 Gaps:11 65.78 263 33.53 7e-20 mol:protein length:263 Glycogenin-1
blastp_uniprot_sprot sp|Q8GWB7|GUX6_ARATH 1 294 + 294 Gaps:9 58.47 537 72.29 2e-120 Putative glucuronosyltransferase PGSIP6 OS Arabidopsis thaliana GN PGSIP6 PE 2 SV 1
blastp_uniprot_sprot sp|Q8W4A7|GUX3_ARATH 25 194 + 170 Gaps:5 27.67 618 37.43 1e-31 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 3 OS Arabidopsis thaliana GN GUX3 PE 2 SV 1
blastp_uniprot_sprot sp|Q9LSB1|GUX1_ARATH 18 194 + 177 Gaps:2 27.16 659 35.75 1e-31 UDP-glucuronate:xylan alpha-glucuronosyltransferase 1 OS Arabidopsis thaliana GN GUX1 PE 2 SV 1
blastp_uniprot_sprot sp|F4HZC3|GUX5_ARATH 32 194 + 163 Gaps:3 28.98 566 42.07 2e-30 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 5 OS Arabidopsis thaliana GN GUX5 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FZ37|GUX4_ARATH 32 194 + 163 Gaps:3 29.44 557 38.41 7e-26 Putative UDP-glucuronate:xylan alpha-glucuronosyltransferase 4 OS Arabidopsis thaliana GN GUX4 PE 3 SV 1
blastp_uniprot_sprot sp|Q8GWW4|GUX2_ARATH 31 194 + 164 Gaps:1 27.68 596 35.15 2e-25 UDP-glucuronate:xylan alpha-glucuronosyltransferase 2 OS Arabidopsis thaliana GN GUX2 PE 2 SV 1
blastp_uniprot_sprot sp|F4JMI5|GUX7_ARATH 32 230 + 199 Gaps:13 42.11 494 33.17 5e-22 Putative glucuronosyltransferase PGSIP7 OS Arabidopsis thaliana GN PGSIP7 PE 3 SV 1
blastp_uniprot_sprot sp|Q9R062|GLYG_MOUSE 29 194 + 166 Gaps:11 51.95 333 35.26 4e-21 Glycogenin-1 OS Mus musculus GN Gyg1 PE 2 SV 3
blastp_uniprot_sprot sp|Q8VZP6|GUX8_ARATH 32 230 + 199 Gaps:12 41.65 497 31.88 1e-20 Putative glucuronosyltransferase PGSIP8 OS Arabidopsis thaliana GN PGSIP8 PE 2 SV 1
blastp_uniprot_sprot sp|O08730|GLYG_RAT 29 199 + 171 Gaps:11 53.45 333 33.71 3e-20 Glycogenin-1 OS Rattus norvegicus GN Gyg1 PE 2 SV 4

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 30 201 172 SSF53448 none none IPR029044
Phobius 246 267 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 51 245 195 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
PANTHER 1 233 233 PTHR11183 none none IPR002495
Gene3D 29 235 207 G3DSA:3.90.550.10 none none IPR029044
Pfam 34 231 198 PF01501 none Glycosyl transferase family 8 IPR002495
Phobius 1 22 22 SIGNAL_PEPTIDE none Signal peptide region none
Phobius 32 50 19 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 1 233 233 PTHR11183:SF40 none none none
Phobius 23 31 9 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 19 22 4 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 268 295 28 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

5 Localization

Analysis Start End Length
TMHMM 5 22 17
TMHMM 32 50 18
TMHMM 246 268 22
SignalP_GRAM_POSITIVE 1 27 26
SignalP_EUK 1 22 21

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 22   Secretory pathway 1 0.963 0.038 NON-PLANT 22