1 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0004867 | serine-type endopeptidase inhibitor activity | Stops, prevents or reduces the activity of serine-type endopeptidases, enzymes that catalyze the hydrolysis of nonterminal peptide bonds in a polypeptide chain; a serine residue (and a histidine residue) are at the active center of the enzyme. |
10 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|fve:101299109 | 3 | 70 | + | 68 | Gaps:4 | 88.61 | 79 | 64.29 | 4e-20 | proteinase inhibitor type-2 CEVI57-like |
blastp_kegg | lcl|fve:101295232 | 3 | 70 | + | 68 | Gaps:4 | 87.50 | 80 | 61.43 | 1e-18 | proteinase inhibitor type-2 CEVI57-like |
blastp_kegg | lcl|fve:101294662 | 7 | 70 | + | 64 | Gaps:4 | 82.50 | 80 | 63.64 | 7e-18 | proteinase inhibitor PSI-1.2-like |
blastp_kegg | lcl|pper:PRUPE_ppb022308mg | 15 | 71 | + | 57 | Gaps:3 | 72.50 | 80 | 68.97 | 1e-16 | hypothetical protein |
blastp_kegg | lcl|aly:ARALYDRAFT_476337 | 4 | 75 | + | 72 | Gaps:5 | 93.90 | 82 | 54.55 | 3e-16 | serine-type endopeptidase inhibitor |
blastp_kegg | lcl|pmum:103343080 | 4 | 70 | + | 67 | Gaps:6 | 87.65 | 81 | 64.79 | 7e-16 | proteinase inhibitor type-2 CEVI57 |
blastp_kegg | lcl|brp:103852750 | 1 | 75 | + | 75 | Gaps:5 | 98.77 | 81 | 51.25 | 1e-15 | proteinase inhibitor PSI-1.2 |
blastp_kegg | lcl|pper:PRUPE_ppa017948mg | 4 | 70 | + | 67 | Gaps:6 | 87.65 | 81 | 64.79 | 2e-15 | hypothetical protein |
blastp_kegg | lcl|ath:AT1G72060 | 1 | 75 | + | 75 | Gaps:5 | 98.77 | 81 | 50.00 | 3e-15 | serine-type endopeptidase inhibitor |
blastp_kegg | lcl|crb:CARUB_v10021230mg | 1 | 75 | + | 75 | Gaps:5 | 100.00 | 80 | 51.25 | 2e-14 | hypothetical protein |
7 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Phobius | 1 | 26 | 26 | SIGNAL_PEPTIDE | none | Signal peptide region | none |
Phobius | 10 | 21 | 12 | SIGNAL_PEPTIDE_H_REGION | none | Hydrophobic region of a signal peptide. | none |
Phobius | 1 | 9 | 9 | SIGNAL_PEPTIDE_N_REGION | none | N-terminal region of a signal peptide. | none |
SUPERFAMILY | 17 | 74 | 58 | SSF100897 | none | none | none |
Phobius | 22 | 26 | 5 | SIGNAL_PEPTIDE_C_REGION | none | C-terminal region of a signal peptide. | none |
Pfam | 27 | 70 | 44 | PF02428 | none | Potato type II proteinase inhibitor family | IPR003465 |
Phobius | 27 | 75 | 49 | NON_CYTOPLASMIC_DOMAIN | none | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | none |
19 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2003_QTL2_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 87 | lod | 3,3 | 8,7 |
Bourran2_2004_QTL9_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1C34E9_788 | v_12238_322 | 50 | 25 | 75 | lod | 4,4 | 10,1 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf | Qrob_Chr02 | 2 | s_1AQA4Z_1644 | s_1AK5QX_947 | 53.67 | 14,01 | 79,68 | lod | 5.6594 | 0.03 |
Bourran1_2004_QTL2_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1AW12F_382 | s_1A77MR_223 | 42 | 6 | 64 | lod | 3,6 | 9,6 |
Bourran2_2002_QTL7_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1ANG6_1446 | v_11270_161 | 40 | 29 | 52 | lod | 8,1 | 16 |
Bourran2_2002_QTL9_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1BFNDA_375 | s_1A3VA1_2139 | 32,5 | 17 | 62 | lod | 3,1 | 4,2 |
Bourran2_2003_QTL8_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1ANG6_1446 | v_11270_161 | 40 | 0 | 72 | lod | 4,4 | 9,9 |
Bourran2_2014_nP_A4 | Qrob_Chr11 | 11 | s_1B58GB_1413 | s_1A5BYY_1671 | 11,15 | 0 | 42,38 | lod | 1,8913 | 4,5 |
Bourran2_2015_nP_A4 | Qrob_Chr02 | 2 | s_1A0FUE_1868 | s_1A1UAI_500 | 20,64 | 20,47 | 21,36 | lod | 5.8 | 10.9 |
Bourran2_2015_nPriLBD_A4 | Qrob_Chr02 | 2 | s_1CP5DI_1183 | s_1A63ZX_1277 | 24,87 | 24,63 | 26,18 | lod | 3.8 | 7 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf | Qrob_Chr02 | 2 | s_1AEP21_172 | v_6048_204 | 46.33 | 22,5 | 65,23 | lod | 4.972 | 0.03 |
Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
Bourran2_2015_nSecLBD_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 35,81 | 34,88 | 37,45 | lod | 4.4 | 10.4 |
Bourran1_2003_QTL1_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1AR8KI_1183 | s_1B0QB1_473 | 22 | 6 | 41 | lod | 4,2 | 11,5 |
Bourran1_2004_QTL3_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 46 | lod | 2,9 | 6,4 |
Bourran2_2015_nEpiBC_A4 | Qrob_Chr07 | 7 | s_1DP9TW_798 | v_8128_173 | 22,61 | 22,14 | 22,73 | lod | 3.1 | 8.5 |
Champenoux_2015_nEpis_A4 | Qrob_Chr02 | 2 | s_1BAGIZ_823 | s_1BN4CB_644 | 23,06 | 23,06 | 23,06 | lod | 4.9 | 11 |
Champenoux_2015_nP_A4 | Qrob_Chr02 | 2 | s_1BN4CB_644 | v_508_128 | 23,76 | 23,06 | 24,51 | lod | 2.8 | 6.2 |
Champenoux_2015_nPriLBD_A4 | Qrob_Chr02 | 2 | s_1CP5DI_1183 | s_1A63ZX_1277 | 25,35 | 24,63 | 26,18 | lod | 4.0 | 8.7 |