Protein : Qrob_P0224600.2 Q. robur
Protein Identifier  ? Qrob_P0224600.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=28) K01213 - galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67] Code Enzyme  EC:3.2.1.15
Gene Prediction Quality  validated Protein length 

Sequence

Length: 303  
Kegg Orthology  K01213
Paste the following link
Lists
This Protein isn't in any lists. Upload a list.

Sequence Feature Displayer

Protein Sequence Displayer

J Browse Displayer

0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004650 polygalacturonase activity Catalysis of the random hydrolysis of (1->4)-alpha-D-galactosiduronic linkages in pectate and other galacturonans.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_002289 71 300 + 230 Gaps:33 64.94 405 53.23 2e-91 Polygalacturonase
blastp_kegg lcl|vvi:100259750 73 299 + 227 Gaps:33 65.65 393 53.88 5e-91 polygalacturonase-like
blastp_kegg lcl|cmo:103498752 70 300 + 231 Gaps:34 61.92 428 55.09 1e-88 exopolygalacturonase-like
blastp_kegg lcl|tcc:TCM_043174 71 298 + 228 Gaps:32 65.00 400 54.23 4e-88 Pectin lyase-like superfamily protein putative
blastp_kegg lcl|tcc:TCM_002294 71 300 + 230 Gaps:33 51.07 515 53.23 5e-88 Pectin lyase-like superfamily protein putative
blastp_kegg lcl|cmo:103504477 70 298 + 229 Gaps:34 72.05 365 55.13 3e-87 exopolygalacturonase-like
blastp_kegg lcl|vvi:100247792 71 298 + 228 Gaps:33 65.91 396 52.11 4e-87 polygalacturonase-like
blastp_kegg lcl|fve:101311308 46 301 + 256 Gaps:34 73.10 394 51.04 4e-86 exopolygalacturonase-like
blastp_kegg lcl|tcc:TCM_043175 71 298 + 228 Gaps:33 64.91 399 53.28 1e-85 Pectin lyase-like superfamily protein putative
blastp_kegg lcl|pxb:103955042 70 298 + 229 Gaps:34 65.75 400 52.09 1e-85 exopolygalacturonase-like
blastp_pdb 1bhe_A 84 267 + 184 Gaps:25 51.33 376 31.09 2e-10 mol:protein length:376 POLYGALACTURONASE
blastp_pdb 2iq7_G 133 300 + 168 Gaps:32 52.51 339 27.53 1e-07 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_F 133 300 + 168 Gaps:32 52.51 339 27.53 1e-07 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_E 133 300 + 168 Gaps:32 52.51 339 27.53 1e-07 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_D 133 300 + 168 Gaps:32 52.51 339 27.53 1e-07 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_C 133 300 + 168 Gaps:32 52.51 339 27.53 1e-07 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_B 133 300 + 168 Gaps:32 52.51 339 27.53 1e-07 mol:protein length:339 endopolygalacturonase
blastp_pdb 2iq7_A 133 300 + 168 Gaps:32 52.51 339 27.53 1e-07 mol:protein length:339 endopolygalacturonase
blastp_pdb 1ib4_B 133 300 + 168 Gaps:26 51.92 339 28.41 7e-07 mol:protein length:339 POLYGALACTURONASE
blastp_pdb 1ib4_A 133 300 + 168 Gaps:26 51.92 339 28.41 7e-07 mol:protein length:339 POLYGALACTURONASE
blastp_uniprot_sprot sp|Q6H9K0|PGLR2_PLAAC 71 295 + 225 Gaps:33 68.44 377 51.16 8e-83 Exopolygalacturonase (Fragment) OS Platanus acerifolia GN plaa2 PE 1 SV 1
blastp_uniprot_sprot sp|Q39786|PGLR_GOSHI 70 299 + 230 Gaps:32 64.37 407 48.09 6e-82 Polygalacturonase OS Gossypium hirsutum GN G9 PE 2 SV 1
blastp_uniprot_sprot sp|Q39766|PGLR_GOSBA 70 299 + 230 Gaps:32 64.37 407 48.09 4e-81 Polygalacturonase OS Gossypium barbadense GN G9 PE 2 SV 1
blastp_uniprot_sprot sp|Q05967|PGLR_TOBAC 37 299 + 263 Gaps:43 74.24 396 46.26 3e-80 Polygalacturonase OS Nicotiana tabacum GN PG1 PE 2 SV 1
blastp_uniprot_sprot sp|P49063|PGLR2_ARATH 46 299 + 254 Gaps:33 64.64 444 44.95 2e-75 Exopolygalacturonase clone GBGA483 OS Arabidopsis thaliana GN At3g07850 PE 2 SV 2
blastp_uniprot_sprot sp|P24548|PGLR_OENOR 71 299 + 229 Gaps:34 72.65 362 46.39 1e-74 Exopolygalacturonase (Fragment) OS Oenothera organensis PE 2 SV 1
blastp_uniprot_sprot sp|Q40312|PGLR_MEDSA 76 298 + 223 Gaps:35 59.86 421 49.21 6e-72 Polygalacturonase OS Medicago sativa PE 2 SV 1
blastp_uniprot_sprot sp|P35337|PGLR_BRANA 63 298 + 236 Gaps:34 68.01 397 43.33 9e-72 Polygalacturonase OS Brassica napus PE 2 SV 1
blastp_uniprot_sprot sp|P35339|PGLR3_MAIZE 71 270 + 200 Gaps:18 53.17 410 48.17 9e-58 Exopolygalacturonase OS Zea mays GN PG2C PE 2 SV 1
blastp_uniprot_sprot sp|P35338|PGLR2_MAIZE 71 300 + 230 Gaps:18 60.49 410 44.35 2e-57 Exopolygalacturonase OS Zea mays GN PG9 PE 2 SV 1

10 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 5 16 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
PANTHER 72 300 229 PTHR31375:SF2 none none none
Gene3D 75 299 225 G3DSA:2.160.20.10 none none IPR012334
Phobius 1 4 4 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 22 302 281 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 75 299 225 SSF51126 none none IPR011050
Phobius 1 21 21 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 72 300 229 PTHR31375 none none none
Pfam 70 272 203 PF00295 none Glycosyl hydrolases family 28 IPR000743
Phobius 17 21 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_EUK 1 21 20
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_GRAM_POSITIVE 1 23 22

0 Qtllist

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 21   Secretory pathway 1 0.911 0.037 NON-PLANT 21