Protein : Qrob_P0222330.2 Q. robur
Protein Identifier  ? Qrob_P0222330.2 Organism . Name  Quercus robur
Score  97.0 Score Type  egn
Protein Description  (M=1) PTHR10060:SF15 - DEOXYRIBONUCLEASE TATDN1-RELATED (PTHR10060:SF15) Gene Prediction Quality  validated
Protein length 

Sequence

Length: 316  
Kegg Orthology  K03424
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Protein Sequence Displayer

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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016888 endodeoxyribonuclease activity, producing 5'-phosphomonoesters Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.

39 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100814321 8 313 + 306 none 95.92 319 87.91 0.0 putative deoxyribonuclease TATDN1-like
blastp_kegg lcl|cit:102629588 8 309 + 302 none 94.38 320 88.41 0.0 putative deoxyribonuclease TATDN1-like
blastp_kegg lcl|cic:CICLE_v10012219mg 8 309 + 302 none 94.38 320 88.08 0.0 hypothetical protein
blastp_kegg lcl|mdm:103413527 8 311 + 304 none 95.30 319 87.83 0.0 putative deoxyribonuclease TATDN1
blastp_kegg lcl|rcu:RCOM_0420260 11 310 + 300 none 98.68 304 87.67 0.0 TatD DNase domain-containing deoxyribonuclease putative
blastp_kegg lcl|pper:PRUPE_ppa008794mg 8 311 + 304 none 95.30 319 87.83 0.0 hypothetical protein
blastp_kegg lcl|pmum:103339545 8 311 + 304 none 95.30 319 86.84 0.0 putative deoxyribonuclease TATDN1
blastp_kegg lcl|pxb:103935226 8 311 + 304 none 95.30 319 86.51 0.0 putative deoxyribonuclease TATDN1
blastp_kegg lcl|pxb:103935217 8 311 + 304 none 95.30 319 86.51 0.0 putative deoxyribonuclease TATDN1
blastp_kegg lcl|pxb:103952737 8 311 + 304 none 95.30 319 86.51 0.0 putative deoxyribonuclease TATDN1
blastp_pdb 2xio_A 8 296 + 289 Gaps:7 93.69 301 52.48 6e-100 mol:protein length:301 PUTATIVE DEOXYRIBONUCLEASE TATDN1
blastp_pdb 3e2v_B 8 294 + 287 Gaps:86 92.52 401 37.20 7e-62 mol:protein length:401 3'-5'-exonuclease
blastp_pdb 3e2v_A 8 294 + 287 Gaps:86 92.52 401 37.20 7e-62 mol:protein length:401 3'-5'-exonuclease
blastp_pdb 3ipw_A 8 296 + 289 Gaps:14 88.31 325 38.33 3e-51 mol:protein length:325 Hydrolase TatD family protein
blastp_pdb 3rcm_A 27 275 + 249 Gaps:42 78.40 287 39.11 3e-34 mol:protein length:287 TatD family hydrolase
blastp_pdb 2gzx_B 25 276 + 252 Gaps:40 83.02 265 38.64 1e-31 mol:protein length:265 putative TatD related DNase
blastp_pdb 2gzx_A 25 276 + 252 Gaps:40 83.02 265 38.64 1e-31 mol:protein length:265 putative TatD related DNase
blastp_pdb 1j6o_A 25 295 + 271 Gaps:38 88.43 268 35.86 1e-28 mol:protein length:268 TatD-related deoxyribonuclease
blastp_pdb 1xwy_A 29 275 + 247 Gaps:34 82.95 264 34.70 3e-28 mol:protein length:264 Deoxyribonuclease tatD
blastp_pdb 1zzm_A 25 222 + 198 Gaps:20 73.36 259 33.16 8e-19 mol:protein length:259 putative deoxyribonuclease yjjV
blastp_uniprot_sprot sp|Q640V9|TATD1_XENLA 8 296 + 289 Gaps:7 94.95 297 52.48 6e-102 Putative deoxyribonuclease TATDN1 OS Xenopus laevis GN tatdn1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6P1N9|TATD1_HUMAN 8 296 + 289 Gaps:7 94.95 297 52.48 6e-100 Putative deoxyribonuclease TATDN1 OS Homo sapiens GN TATDN1 PE 1 SV 2
blastp_uniprot_sprot sp|Q148G4|TATD1_BOVIN 8 296 + 289 Gaps:7 94.95 297 52.13 2e-98 Putative deoxyribonuclease TATDN1 OS Bos taurus GN TATDN1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6P8M1|TATD1_MOUSE 8 295 + 288 Gaps:7 95.25 295 51.96 4e-98 Putative deoxyribonuclease TATDN1 OS Mus musculus GN Tatdn1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6GML7|TATD1_DANRE 2 295 + 294 Gaps:12 97.99 298 50.68 1e-90 Putative deoxyribonuclease TATDN1 OS Danio rerio GN tatdn1 PE 2 SV 1
blastp_uniprot_sprot sp|Q9UUF1|YNF8_SCHPO 5 294 + 290 Gaps:6 93.59 312 45.55 4e-83 Deoxyribonuclease Tat-D OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN pi038 PE 3 SV 1
blastp_uniprot_sprot sp|P34220|YBF5_YEAST 8 294 + 287 Gaps:94 88.76 418 37.20 7e-61 Deoxyribonuclease Tat-D OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN YBL055C PE 1 SV 1
blastp_uniprot_sprot sp|Q8SW70|TATD1_ENCCU 42 294 + 253 Gaps:28 82.42 273 41.33 2e-42 Putative deoxyribonuclease TATDN1 homolog OS Encephalitozoon cuniculi (strain GB-M1) GN ECU03_0200 PE 3 SV 1
blastp_uniprot_sprot sp|C4VAS3|TATD1_NOSCE 99 276 + 178 Gaps:20 61.00 259 43.67 2e-35 Putative deoxyribonuclease TATDN1 homolog OS Nosema ceranae (strain BRL01) GN NCER_101798 PE 3 SV 1
blastp_uniprot_sprot sp|B7XJI2|TATD1_ENTBH 42 294 + 253 Gaps:34 84.31 274 33.77 1e-31 Putative deoxyribonuclease TATDN1 homolog OS Enterocytozoon bieneusi (strain H348) GN EBI_25826 PE 3 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 8 231 224 PTHR10060 none none IPR001130
PANTHER 253 298 46 PTHR10060 none none IPR001130
PANTHER 8 231 224 PTHR10060:SF15 none none none
PANTHER 253 298 46 PTHR10060:SF15 none none none
PIRSF 2 298 297 PIRSF005902 none none IPR001130
SUPERFAMILY 23 295 273 SSF51556 none none none
Gene3D 8 294 287 G3DSA:3.20.20.140 none none none
ProSitePatterns 142 152 11 PS01090 none TatD deoxyribonuclease family signature 2. IPR018228
Pfam 21 294 274 PF01026 none TatD related DNase IPR001130

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1

0 Targeting