Protein : Qrob_P0219780.2 Q. robur
Protein Identifier  ? Qrob_P0219780.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PTHR11566:SF45 - DYNAMIN-RELATED PROTEIN 4C-RELATED (PTHR11566:SF45) Code Enzyme  EC:3.6.5.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 656  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101306625 16 655 + 640 Gaps:1 93.44 686 75.98 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pmum:103342380 10 655 + 646 Gaps:1 95.15 680 74.81 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pxb:103944355 4 655 + 652 Gaps:7 98.51 669 73.29 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pxb:103944354 4 655 + 652 Gaps:7 97.63 675 72.84 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pper:PRUPE_ppa002498mg 16 653 + 638 Gaps:1 95.95 666 73.55 0.0 hypothetical protein
blastp_kegg lcl|mdm:103453910 4 653 + 650 Gaps:7 98.21 669 72.30 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pmum:103342322 10 653 + 644 Gaps:1 94.85 680 73.18 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pxb:103944357 4 655 + 652 Gaps:7 92.82 710 71.78 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|mdm:103453911 1 655 + 655 Gaps:7 98.95 669 71.30 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|rcu:RCOM_1437440 3 655 + 653 Gaps:10 97.33 675 70.47 0.0 interferon-induced GTP-binding protein mx putative
blastp_pdb 3zys_E 12 468 + 457 Gaps:52 70.24 662 33.98 2e-58 mol:protein length:662 INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
blastp_pdb 3zys_B 12 468 + 457 Gaps:52 70.24 662 33.98 2e-58 mol:protein length:662 INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
blastp_pdb 3szr_A 12 468 + 457 Gaps:52 76.48 608 33.76 1e-57 mol:protein length:608 Interferon-induced GTP-binding protein Mx1
blastp_pdb 3snh_A 46 434 + 389 Gaps:23 52.76 743 34.69 2e-41 mol:protein length:743 Dynamin-1
blastp_pdb 2aka_B 46 316 + 271 Gaps:11 92.31 299 37.68 2e-41 mol:protein length:299 Dynamin-1
blastp_pdb 3l43_D 46 316 + 271 Gaps:11 86.52 319 38.04 2e-41 mol:protein length:319 Dynamin-3
blastp_pdb 3l43_C 46 316 + 271 Gaps:11 86.52 319 38.04 2e-41 mol:protein length:319 Dynamin-3
blastp_pdb 3l43_B 46 316 + 271 Gaps:11 86.52 319 38.04 2e-41 mol:protein length:319 Dynamin-3
blastp_pdb 3l43_A 46 316 + 271 Gaps:11 86.52 319 38.04 2e-41 mol:protein length:319 Dynamin-3
blastp_pdb 1jx2_B 46 317 + 272 Gaps:21 90.48 315 36.84 3e-41 mol:protein length:315 Dynamin A GTPase domain
blastp_uniprot_sprot sp|Q9ZP55|DRP4C_ARATH 15 649 + 635 Gaps:9 95.07 669 64.78 0.0 Dynamin-related protein 4C OS Arabidopsis thaliana GN DRP4C PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZP56|DRP4A_ARATH 5 286 + 282 none 93.69 301 76.24 6e-148 Putative dynamin-related protein 4A OS Arabidopsis thaliana GN DRP4A PE 5 SV 1
blastp_uniprot_sprot sp|Q4U4N4|MX2_ICTPU 22 646 + 625 Gaps:74 99.04 625 32.96 9e-62 Interferon-induced GTP-binding protein Mx2 OS Ictalurus punctatus GN mx2 PE 2 SV 1
blastp_uniprot_sprot sp|Q7T2P0|MX1_ICTPU 16 646 + 631 Gaps:84 99.69 635 33.02 9e-61 Interferon-induced GTP-binding protein Mx1 OS Ictalurus punctatus GN mx1 PE 2 SV 1
blastp_uniprot_sprot sp|Q91192|MX_ONCMY 22 640 + 619 Gaps:92 97.75 621 31.80 2e-59 Interferon-induced GTP-binding protein Mx OS Oncorhynchus mykiss GN mx PE 2 SV 1
blastp_uniprot_sprot sp|Q8JH68|MXA_DANRE 22 629 + 608 Gaps:68 93.50 646 33.11 2e-59 Interferon-induced GTP-binding protein MxA OS Danio rerio GN mxa PE 2 SV 1
blastp_uniprot_sprot sp|Q5R5G3|MX1_PONAB 12 468 + 457 Gaps:52 70.24 662 33.98 1e-58 Interferon-induced GTP-binding protein Mx1 OS Pongo abelii GN MX1 PE 2 SV 1
blastp_uniprot_sprot sp|Q800G8|MXB_DANRE 22 317 + 296 Gaps:23 48.96 627 41.37 3e-58 Interferon-induced GTP-binding protein MxB OS Danio rerio GN mxb PE 2 SV 2
blastp_uniprot_sprot sp|P18589|MX2_RAT 18 468 + 451 Gaps:48 69.65 659 34.20 3e-58 Interferon-induced GTP-binding protein Mx2 OS Rattus norvegicus GN Mx2 PE 2 SV 1
blastp_uniprot_sprot sp|Q6DKF0|MXC_DANRE 22 653 + 632 Gaps:55 97.28 626 30.21 4e-58 Interferon-induced GTP-binding protein MxC OS Danio rerio GN mxc PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 240 515 276 PF01031 none Dynamin central region IPR000375
PANTHER 5 647 643 PTHR11566:SF45 none none none
Gene3D 24 315 292 G3DSA:3.40.50.300 none none IPR027417
ProSiteProfiles 559 651 93 PS51388 none GED domain profile. IPR020850
SUPERFAMILY 22 315 294 SSF52540 none none IPR027417
Pfam 51 224 174 PF00350 none Dynamin family none
Pfam 561 645 85 PF02212 none Dynamin GTPase effector domain IPR003130
PANTHER 5 647 643 PTHR11566 none none IPR022812
SMART 23 261 239 SM00053 none Dynamin, GTPase IPR001401
PRINTS 213 229 17 PR00195 none Dynamin signature IPR022812
PRINTS 72 89 18 PR00195 none Dynamin signature IPR022812
PRINTS 144 161 18 PR00195 none Dynamin signature IPR022812
PRINTS 48 66 19 PR00195 none Dynamin signature IPR022812
PRINTS 194 212 19 PR00195 none Dynamin signature IPR022812
SMART 551 646 96 SM00302 none Dynamin GTPase effector domain IPR003130
ProSiteProfiles 45 306 262 PS51718 none Dynamin-type guanine nucleotide-binding (G) domain profile. IPR030381

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

0 Targeting