Protein : Qrob_P0219750.2 Q. robur
Protein Identifier  ? Qrob_P0219750.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=6) PTHR11566:SF45 - DYNAMIN-RELATED PROTEIN 4C-RELATED (PTHR11566:SF45) Code Enzyme  EC:3.6.5.5
Gene Prediction Quality  validated Protein length 

Sequence

Length: 676  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|fve:101306625 2 675 + 674 Gaps:18 99.71 686 73.98 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pmum:103342380 1 675 + 675 Gaps:9 100.00 680 73.82 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pxb:103944355 16 675 + 660 Gaps:7 99.70 669 74.21 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pxb:103944354 13 675 + 663 Gaps:8 99.11 675 73.99 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|mdm:103453910 24 674 + 651 Gaps:7 98.36 669 74.16 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pper:PRUPE_ppa002498mg 1 674 + 674 Gaps:11 99.85 666 72.78 0.0 hypothetical protein
blastp_kegg lcl|pmum:103342322 1 674 + 674 Gaps:9 99.85 680 71.43 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|mdm:103453911 16 675 + 660 Gaps:7 99.70 669 72.11 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|pxb:103944357 24 675 + 652 Gaps:7 92.82 710 73.14 0.0 dynamin-related protein 4C-like
blastp_kegg lcl|rcu:RCOM_1437440 25 675 + 651 Gaps:10 97.04 675 71.60 0.0 interferon-induced GTP-binding protein mx putative
blastp_pdb 3szr_A 32 599 + 568 Gaps:52 94.08 608 31.12 1e-58 mol:protein length:608 Interferon-induced GTP-binding protein Mx1
blastp_pdb 3zys_E 32 488 + 457 Gaps:48 70.24 662 34.19 1e-58 mol:protein length:662 INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
blastp_pdb 3zys_B 32 488 + 457 Gaps:48 70.24 662 34.19 1e-58 mol:protein length:662 INTERFERON-INDUCED GTP-BINDING PROTEIN MX1
blastp_pdb 1jx2_B 49 326 + 278 Gaps:17 93.02 315 37.54 3e-43 mol:protein length:315 Dynamin A GTPase domain
blastp_pdb 1jwy_B 49 326 + 278 Gaps:17 93.02 315 37.54 3e-43 mol:protein length:315 Dynamin A GTPase domain
blastp_pdb 3l43_D 66 336 + 271 Gaps:11 86.52 319 39.13 4e-43 mol:protein length:319 Dynamin-3
blastp_pdb 3l43_C 66 336 + 271 Gaps:11 86.52 319 39.13 4e-43 mol:protein length:319 Dynamin-3
blastp_pdb 3l43_B 66 336 + 271 Gaps:11 86.52 319 39.13 4e-43 mol:protein length:319 Dynamin-3
blastp_pdb 3l43_A 66 336 + 271 Gaps:11 86.52 319 39.13 4e-43 mol:protein length:319 Dynamin-3
blastp_pdb 3zys_D 66 371 + 306 Gaps:14 88.95 353 35.35 2e-42 mol:protein length:353 DYNAMIN-1
blastp_uniprot_sprot sp|Q9ZP55|DRP4C_ARATH 35 669 + 635 Gaps:5 95.07 669 66.19 0.0 Dynamin-related protein 4C OS Arabidopsis thaliana GN DRP4C PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZP56|DRP4A_ARATH 25 306 + 282 none 93.69 301 77.30 1e-151 Putative dynamin-related protein 4A OS Arabidopsis thaliana GN DRP4A PE 5 SV 1
blastp_uniprot_sprot sp|Q7T2P0|MX1_ICTPU 36 666 + 631 Gaps:74 99.69 635 32.54 5e-65 Interferon-induced GTP-binding protein Mx1 OS Ictalurus punctatus GN mx1 PE 2 SV 1
blastp_uniprot_sprot sp|Q8JH68|MXA_DANRE 38 646 + 609 Gaps:74 93.65 646 33.88 2e-63 Interferon-induced GTP-binding protein MxA OS Danio rerio GN mxa PE 2 SV 1
blastp_uniprot_sprot sp|Q4U4N4|MX2_ICTPU 38 666 + 629 Gaps:62 99.68 625 31.14 2e-63 Interferon-induced GTP-binding protein Mx2 OS Ictalurus punctatus GN mx2 PE 2 SV 1
blastp_uniprot_sprot sp|Q91192|MX_ONCMY 38 666 + 629 Gaps:90 99.36 621 31.93 8e-63 Interferon-induced GTP-binding protein Mx OS Oncorhynchus mykiss GN mx PE 2 SV 1
blastp_uniprot_sprot sp|P18589|MX2_RAT 38 488 + 451 Gaps:34 69.65 659 34.64 2e-61 Interferon-induced GTP-binding protein Mx2 OS Rattus norvegicus GN Mx2 PE 2 SV 1
blastp_uniprot_sprot sp|P18590|MX3_RAT 38 488 + 451 Gaps:34 69.65 659 34.64 3e-61 Interferon-induced GTP-binding protein Mx3 OS Rattus norvegicus GN Mx3 PE 2 SV 1
blastp_uniprot_sprot sp|Q6TN15|MX_SINCH 38 362 + 325 Gaps:31 54.95 626 40.12 7e-61 Interferon-induced GTP-binding protein Mx OS Siniperca chuatsi GN mx PE 2 SV 1
blastp_uniprot_sprot sp|Q800G5|MXE_DANRE 34 667 + 634 Gaps:91 98.08 625 29.69 2e-60 Interferon-induced GTP-binding protein MxE OS Danio rerio GN mxe PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 25 667 643 PTHR11566 none none IPR022812
Pfam 580 665 86 PF02212 none Dynamin GTPase effector domain IPR003130
SMART 571 666 96 SM00302 none Dynamin GTPase effector domain IPR003130
PRINTS 92 109 18 PR00195 none Dynamin signature IPR022812
PRINTS 233 249 17 PR00195 none Dynamin signature IPR022812
PRINTS 214 232 19 PR00195 none Dynamin signature IPR022812
PRINTS 68 86 19 PR00195 none Dynamin signature IPR022812
PRINTS 164 181 18 PR00195 none Dynamin signature IPR022812
ProSiteProfiles 579 671 93 PS51388 none GED domain profile. IPR020850
SUPERFAMILY 42 335 294 SSF52540 none none IPR027417
Pfam 71 244 174 PF00350 none Dynamin family none
ProSiteProfiles 65 326 262 PS51718 none Dynamin-type guanine nucleotide-binding (G) domain profile. IPR030381
PANTHER 25 667 643 PTHR11566:SF45 none none none
SMART 43 283 241 SM00053 none Dynamin, GTPase IPR001401
Gene3D 44 335 292 G3DSA:3.40.50.300 none none IPR027417
Pfam 260 537 278 PF01031 none Dynamin central region IPR000375

0 Localization

12 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_nPriLBD_3P Qrob_Chr08 8 v_5216_549 v_11837_70 12,36 0 30,43 lod 2,5806 5,1
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2014_nP_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 7,9 0,09 30,09 lod 2,3636 5
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Bourran2_2014_nEpiBC_A4 Qrob_Chr07 7 s_2FI9D9_500 s_1AXDMJ_325 12,26 0 34,9 lod 2,2306 6,1
Bourran2_2014_nPriBD_3P Qrob_Chr11 11 v_11486_194 s_1AT3E_2335 5,54 0,4 20,6 lod 2,6345 5,9
Bourran2_2002_QTL10_peak_Bud_burst_3P Qrob_Chr07 7 s_1CAWP_311 s_1BEZ9M_461 7,5 0 21,5 lod 3,7 6,3
Bourran2_2014_nPriBD*_A4 Qrob_Chr07 7 s_1A7UI0_596 s_1A3H6S_352 8,02 0 20,53 lod 4,1062 10,8

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 109   Mitochondrion 5 0.036 0.488 NON-PLANT 109