Protein : Qrob_P0219650.2 Q. robur
Protein Identifier  ? Qrob_P0219650.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=4) K07897 - Ras-related protein Rab-7A Gene Prediction Quality  validated
Protein length 

Sequence

Length: 198  
Kegg Orthology  K07897
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0 Synonyms

9 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0006886 intracellular protein transport The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell.
GO:0007165 signal transduction The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO:0005622 intracellular The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO:0005525 GTP binding Interacting selectively and non-covalently with GTP, guanosine triphosphate.
GO:0015031 protein transport The directed movement of proteins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO:0007264 small GTPase mediated signal transduction Any series of molecular signals in which a small monomeric GTPase relays one or more of the signals.
GO:0003924 GTPase activity Catalysis of the reaction: GTP + H2O = GDP + phosphate.
GO:0006913 nucleocytoplasmic transport The directed movement of molecules between the nucleus and the cytoplasm.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_037872 1 197 + 197 Gaps:9 100.00 206 92.23 4e-135 RAB GTPase G3D
blastp_kegg lcl|vvi:100249742 1 197 + 197 Gaps:10 100.00 207 92.75 9e-135 ras-related protein Rab7-like
blastp_kegg lcl|cit:102618424 1 197 + 197 Gaps:9 100.00 206 91.75 8e-134 ras-related protein RABG3d-like
blastp_kegg lcl|pda:103708986 1 197 + 197 Gaps:10 100.00 207 91.30 8e-134 ras-related protein Rab7
blastp_kegg lcl|atr:s00109p00039990 1 197 + 197 Gaps:9 100.00 206 89.81 1e-133 AMTR_s00109p00039990 hypothetical protein
blastp_kegg lcl|cmo:103500590 1 197 + 197 Gaps:9 100.00 206 90.29 2e-133 ras-related protein Rab7
blastp_kegg lcl|pda:103713276 1 197 + 197 Gaps:11 100.00 208 90.87 6e-133 ras-related protein Rab7-like
blastp_kegg lcl|gmx:100305824 1 197 + 197 Gaps:10 100.00 207 90.82 8e-133 uncharacterized LOC100305824
blastp_kegg lcl|gmx:100783389 1 197 + 197 Gaps:10 100.00 207 90.82 8e-133 ras-related protein Rab7-like
blastp_kegg lcl|rcu:RCOM_1494330 1 197 + 197 Gaps:10 100.00 207 91.30 1e-132 protein with unknown function (EC:3.1.4.12)
blastp_pdb 1vg8_D 1 197 + 197 Gaps:14 99.03 207 66.34 4e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg8_C 1 197 + 197 Gaps:14 99.03 207 66.34 4e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg8_B 1 197 + 197 Gaps:14 99.03 207 66.34 4e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg8_A 1 197 + 197 Gaps:14 99.03 207 66.34 4e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 1vg0_B 1 197 + 197 Gaps:14 99.03 207 66.34 4e-92 mol:protein length:207 Ras-related protein Rab-7
blastp_pdb 3law_E 1 197 + 197 Gaps:16 100.00 207 66.18 1e-91 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_D 1 197 + 197 Gaps:16 100.00 207 66.18 1e-91 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_C 1 197 + 197 Gaps:16 100.00 207 66.18 1e-91 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_B 1 197 + 197 Gaps:16 100.00 207 66.18 1e-91 mol:protein length:207 Ras-related protein Rab-7a
blastp_pdb 3law_A 1 197 + 197 Gaps:16 100.00 207 66.18 1e-91 mol:protein length:207 Ras-related protein Rab-7a
blastp_uniprot_sprot sp|O24461|RAB7_PRUAR 1 197 + 197 Gaps:10 100.00 207 90.34 1e-132 Ras-related protein Rab7 OS Prunus armeniaca PE 2 SV 1
blastp_uniprot_sprot sp|Q9XER8|RAB7_GOSHI 1 197 + 197 Gaps:10 100.00 207 88.41 2e-131 Ras-related protein Rab7 OS Gossypium hirsutum GN RAB7 PE 2 SV 1
blastp_uniprot_sprot sp|Q9C820|RAG3D_ARATH 1 197 + 197 Gaps:9 100.00 206 87.38 8e-130 Ras-related protein RABG3d OS Arabidopsis thaliana GN RABG3D PE 2 SV 1
blastp_uniprot_sprot sp|Q9LW76|RAG3C_ARATH 1 197 + 197 Gaps:9 100.00 206 85.44 8e-128 Ras-related protein RABG3c OS Arabidopsis thaliana GN RABG3C PE 2 SV 1
blastp_uniprot_sprot sp|Q40787|RAB7_CENCI 1 195 + 195 Gaps:10 99.51 206 86.83 1e-126 Ras-related protein Rab7 OS Cenchrus ciliaris PE 2 SV 1
blastp_uniprot_sprot sp|Q9LS94|RAG3F_ARATH 1 197 + 197 Gaps:9 100.00 206 84.47 3e-124 Ras-related protein RABG3f OS Arabidopsis thaliana GN RABG3F PE 2 SV 1
blastp_uniprot_sprot sp|P31022|RAB7_PEA 1 197 + 197 Gaps:9 100.00 206 83.01 3e-122 Ras-related protein Rab7 OS Pisum sativum PE 2 SV 1
blastp_uniprot_sprot sp|P93267|RAB7_MESCR 1 197 + 197 Gaps:10 100.00 207 80.68 5e-120 Ras-related protein Rab7A OS Mesembryanthemum crystallinum PE 2 SV 1
blastp_uniprot_sprot sp|Q9XI98|RAG3E_ARATH 1 197 + 197 Gaps:9 100.00 206 81.07 2e-118 Ras-related protein RABG3e OS Arabidopsis thaliana GN RABG3E PE 2 SV 1
blastp_uniprot_sprot sp|Q41640|RAB7_VIGAC 1 197 + 197 Gaps:9 100.00 206 70.39 4e-103 Ras-related protein Rab7 OS Vigna aconitifolia PE 2 SV 1

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 41 63 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 145 167 23 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 107 120 14 PR00449 none Transforming protein P21 ras signature IPR001806
PRINTS 23 39 17 PR00449 none Transforming protein P21 ras signature IPR001806
SMART 11 170 160 SM00174 "Reactome:REACT_11044" Rho (Ras homology) subfamily of Ras-like small GTPases IPR003578
SUPERFAMILY 5 179 175 SSF52540 none none IPR027417
Pfam 19 168 150 PF00071 none Ras family IPR001806
TIGRFAM 22 163 142 TIGR00231 none small_GTP: small GTP-binding protein domain IPR005225
ProSiteProfiles 4 197 194 PS51419 none small GTPase Rab1 family profile. none
PANTHER 1 197 197 PTHR24073 none none none
Gene3D 4 180 177 G3DSA:3.40.50.300 none none IPR027417
PANTHER 1 197 197 PTHR24073:SF375 none none none
SMART 9 170 162 SM00175 none Rab subfamily of small GTPases IPR003579
SMART 14 185 172 SM00176 none Ran (Ras-related nuclear proteins) /TC4 subfamily of small GTPases IPR002041
SMART 6 170 165 SM00173 none Ras subfamily of RAS small GTPases IPR020849

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 62   Mitochondrion 3 0.075 0.695 NON-PLANT 62