Protein : Qrob_P0207310.2 Q. robur
Protein Identifier  ? Qrob_P0207310.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=8) K13449 - pathogenesis-related protein 1 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 161  
Kegg Orthology  K13449
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005576 extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0009s08670g 1 160 + 160 Gaps:1 100.00 161 75.78 6e-85 pathogenesis-related family protein
blastp_kegg lcl|vvi:100246419 1 160 + 160 none 100.00 160 75.00 3e-84 PR-1 pathogenesis-related protein 1
blastp_kegg lcl|pvu:PHAVU_006G197200g 1 160 + 160 Gaps:5 100.00 159 76.73 1e-83 hypothetical protein
blastp_kegg lcl|gmx:100805116 1 160 + 160 Gaps:4 100.00 164 73.78 1e-83 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|vvi:100253281 1 160 + 160 Gaps:1 91.48 176 70.81 3e-82 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|mdm:103409318 1 160 + 160 Gaps:1 100.00 161 72.05 3e-81 pathogenesis-related protein 1-like
blastp_kegg lcl|gmx:100793958 5 160 + 156 Gaps:10 95.40 174 71.08 4e-81 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|gmx:100794832 5 160 + 156 Gaps:10 95.40 174 71.08 4e-81 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|gmx:100793071 5 160 + 156 Gaps:10 95.40 174 71.08 4e-81 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|gmx:100792015 5 160 + 156 Gaps:10 95.40 174 71.08 4e-81 basic form of pathogenesis-related protein 1-like
blastp_pdb 1cfe_A 25 160 + 136 Gaps:3 100.00 135 62.96 6e-57 mol:protein length:135 PATHOGENESIS-RELATED PROTEIN P14A
blastp_pdb 1smb_A 30 157 + 128 Gaps:5 85.06 154 34.35 6e-20 mol:protein length:154 17kD fetal brain protein
blastp_pdb 2dda_D 22 156 + 135 Gaps:18 68.72 211 31.03 4e-12 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_C 22 156 + 135 Gaps:18 68.72 211 31.03 4e-12 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_B 22 156 + 135 Gaps:18 68.72 211 31.03 4e-12 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_A 22 156 + 135 Gaps:18 68.72 211 31.03 4e-12 mol:protein length:211 Pseudechetoxin
blastp_pdb 3q2u_A 25 154 + 130 Gaps:27 73.66 205 33.77 1e-11 mol:protein length:205 Glioma pathogenesis-related protein 1
blastp_pdb 3q2r_A 25 154 + 130 Gaps:27 73.66 205 33.77 1e-11 mol:protein length:205 Glioma pathogenesis-related protein 1
blastp_pdb 1xta_B 22 157 + 136 Gaps:20 66.97 221 30.41 9e-11 mol:protein length:221 Natrin 1
blastp_pdb 1xta_A 22 157 + 136 Gaps:20 66.97 221 30.41 9e-11 mol:protein length:221 Natrin 1
blastp_uniprot_sprot sp|P09042|PR1C_TOBAC 8 160 + 153 Gaps:2 92.26 168 65.16 1e-69 Pathogenesis-related protein 1C OS Nicotiana tabacum PE 2 SV 3
blastp_uniprot_sprot sp|P11670|PRB1_TOBAC 12 160 + 149 none 84.18 177 65.10 4e-69 Basic form of pathogenesis-related protein 1 OS Nicotiana tabacum PE 3 SV 1
blastp_uniprot_sprot sp|P07053|PR1B_TOBAC 8 160 + 153 Gaps:2 92.26 168 63.87 5e-68 Pathogenesis-related protein 1B OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P33154|PR1_ARATH 2 160 + 159 Gaps:2 97.52 161 63.06 5e-66 Pathogenesis-related protein 1 OS Arabidopsis thaliana GN At2g14610 PE 1 SV 1
blastp_uniprot_sprot sp|P08299|PR1A_TOBAC 18 160 + 143 Gaps:2 86.31 168 65.52 2e-64 Pathogenesis-related protein 1A OS Nicotiana tabacum PE 1 SV 1
blastp_uniprot_sprot sp|P04284|PR06_SOLLC 1 160 + 160 Gaps:3 100.00 159 59.75 9e-63 Pathogenesis-related leaf protein 6 OS Solanum lycopersicum GN PR1B1 PE 1 SV 2
blastp_uniprot_sprot sp|Q04108|PR04_SOLLC 1 160 + 160 Gaps:3 100.00 159 59.75 5e-62 Pathogenesis-related leaf protein 4 OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|Q08697|PR1A_SOLLC 5 155 + 151 Gaps:1 86.86 175 59.21 3e-60 Pathogenesis-related protein 1A1 OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|Q41359|PR1_SAMNI 18 160 + 143 Gaps:3 87.43 167 59.59 6e-57 Pathogenesis-related protein PR-1 type OS Sambucus nigra PE 2 SV 1
blastp_uniprot_sprot sp|Q05968|PR1_HORVU 19 160 + 142 Gaps:4 89.02 164 59.59 7e-54 Pathogenesis-related protein 1 OS Hordeum vulgare PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 26 156 131 SM00198 none SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. IPR014044
Pfam 32 148 117 PF00188 none Cysteine-rich secretory protein family IPR014044
SUPERFAMILY 13 160 148 SSF55797 none none IPR014044
PANTHER 25 160 136 PTHR10334:SF170 none none none
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 20 24 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 25 160 136 PTHR10334 none none IPR001283
PRINTS 116 132 17 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 47 65 19 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 143 156 14 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 93 106 14 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
Phobius 1 24 24 SIGNAL_PEPTIDE none Signal peptide region none
ProSitePatterns 143 154 12 PS01010 none CRISP family signature 2. IPR018244
Phobius 25 160 136 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 24 160 137 G3DSA:3.40.33.10 none none IPR014044
Phobius 8 19 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 24 23
SignalP_GRAM_POSITIVE 1 24 23
SignalP_EUK 1 24 23

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting