Protein : Qrob_P0207260.2 Q. robur
Protein Identifier  ? Qrob_P0207260.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=15) PTHR10334 - CYSTEINE-RICH SECRETORY PROTEIN-RELATED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 160  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0005576 extracellular region The space external to the outermost structure of a cell. For cells without external protective or external encapsulating structures this refers to space outside of the plasma membrane. This term covers the host cell environment outside an intracellular parasite.

41 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100246419 1 159 + 159 Gaps:1 100.00 160 63.12 6e-71 PR-1 pathogenesis-related protein 1
blastp_kegg lcl|vvi:100242852 1 159 + 159 Gaps:2 100.00 161 62.73 1e-69 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|tcc:TCM_006335 1 159 + 159 none 100.00 159 60.38 5e-68 Pathogenesis-related protein 1
blastp_kegg lcl|cit:102627480 1 159 + 159 none 100.00 159 61.01 1e-66 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|cit:102626922 1 159 + 159 none 100.00 159 61.01 1e-66 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|cic:CICLE_v10029459mg 1 159 + 159 none 100.00 159 60.38 2e-66 hypothetical protein
blastp_kegg lcl|vvi:100258414 1 159 + 159 Gaps:1 100.00 160 60.62 5e-66 PR1 pathogenesis-related protein
blastp_kegg lcl|vvi:100251560 1 159 + 159 Gaps:1 100.00 160 60.62 1e-65 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|vvi:100265141 1 159 + 159 Gaps:2 100.00 161 59.63 1e-65 basic form of pathogenesis-related protein 1-like
blastp_kegg lcl|pmum:103334947 1 159 + 159 Gaps:10 100.00 169 59.17 2e-65 basic form of pathogenesis-related protein 1-like
blastp_pdb 1cfe_A 24 159 + 136 Gaps:3 100.00 135 53.33 2e-46 mol:protein length:135 PATHOGENESIS-RELATED PROTEIN P14A
blastp_pdb 3q2u_A 31 153 + 123 Gaps:31 70.24 205 37.50 3e-13 mol:protein length:205 Glioma pathogenesis-related protein 1
blastp_pdb 3q2r_A 31 153 + 123 Gaps:31 70.24 205 37.50 3e-13 mol:protein length:205 Glioma pathogenesis-related protein 1
blastp_pdb 2dda_D 21 155 + 135 Gaps:18 68.72 211 33.10 2e-11 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_C 21 155 + 135 Gaps:18 68.72 211 33.10 2e-11 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_B 21 155 + 135 Gaps:18 68.72 211 33.10 2e-11 mol:protein length:211 Pseudechetoxin
blastp_pdb 2dda_A 21 155 + 135 Gaps:18 68.72 211 33.10 2e-11 mol:protein length:211 Pseudechetoxin
blastp_pdb 1smb_A 21 152 + 132 Gaps:5 87.66 154 28.15 6e-11 mol:protein length:154 17kD fetal brain protein
blastp_pdb 2epf_D 24 155 + 132 Gaps:18 67.62 210 32.39 3e-10 mol:protein length:210 Pseudecin
blastp_pdb 2epf_C 24 155 + 132 Gaps:18 67.62 210 32.39 3e-10 mol:protein length:210 Pseudecin
blastp_uniprot_sprot sp|P11670|PRB1_TOBAC 1 159 + 159 Gaps:2 89.83 177 55.35 8e-57 Basic form of pathogenesis-related protein 1 OS Nicotiana tabacum PE 3 SV 1
blastp_uniprot_sprot sp|P07053|PR1B_TOBAC 4 159 + 156 Gaps:2 94.05 168 54.43 3e-55 Pathogenesis-related protein 1B OS Nicotiana tabacum PE 2 SV 1
blastp_uniprot_sprot sp|P08299|PR1A_TOBAC 17 159 + 143 Gaps:2 86.31 168 56.55 2e-53 Pathogenesis-related protein 1A OS Nicotiana tabacum PE 1 SV 1
blastp_uniprot_sprot sp|P09042|PR1C_TOBAC 4 159 + 156 Gaps:2 94.05 168 52.53 6e-52 Pathogenesis-related protein 1C OS Nicotiana tabacum PE 2 SV 3
blastp_uniprot_sprot sp|P33154|PR1_ARATH 2 159 + 158 Gaps:1 97.52 161 52.23 1e-51 Pathogenesis-related protein 1 OS Arabidopsis thaliana GN At2g14610 PE 1 SV 1
blastp_uniprot_sprot sp|Q08697|PR1A_SOLLC 7 153 + 147 Gaps:1 84.57 175 52.03 3e-51 Pathogenesis-related protein 1A1 OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|P04284|PR06_SOLLC 3 159 + 157 Gaps:3 98.11 159 50.64 2e-50 Pathogenesis-related leaf protein 6 OS Solanum lycopersicum GN PR1B1 PE 1 SV 2
blastp_uniprot_sprot sp|Q04108|PR04_SOLLC 3 159 + 157 Gaps:3 98.11 159 50.64 3e-50 Pathogenesis-related leaf protein 4 OS Solanum lycopersicum PE 2 SV 1
blastp_uniprot_sprot sp|Q41359|PR1_SAMNI 17 159 + 143 Gaps:3 87.43 167 50.68 5e-45 Pathogenesis-related protein PR-1 type OS Sambucus nigra PE 2 SV 1
blastp_uniprot_sprot sp|Q05968|PR1_HORVU 18 159 + 142 Gaps:4 89.02 164 50.00 4e-43 Pathogenesis-related protein 1 OS Hordeum vulgare PE 2 SV 1

16 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SMART 25 155 131 SM00198 none SCP / Tpx-1 / Ag5 / PR-1 / Sc7 family of extracellular domains. IPR014044
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 30 159 130 PTHR10334 none none IPR001283
Pfam 32 147 116 PF00188 none Cysteine-rich secretory protein family IPR014044
Phobius 7 18 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
PANTHER 30 159 130 PTHR10334:SF170 none none none
PRINTS 92 105 14 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 46 64 19 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 142 155 14 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
PRINTS 115 131 17 PR00837 none Allergen V5/Tpx-1 family signature IPR001283
Phobius 24 159 136 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Gene3D 29 159 131 G3DSA:3.40.33.10 none none IPR014044
ProSitePatterns 142 153 12 PS01010 none CRISP family signature 2. IPR018244
SUPERFAMILY 27 159 133 SSF55797 none none IPR014044
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_EUK 1 23 22
SignalP_GRAM_POSITIVE 1 23 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2002_QTL16_peak_Bud_burst_A4 Qrob_Chr11 11 s_A9OIA_166 s_1C6WBF_114 21,23 2,83 42,83 lod 5,1 7,2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Champenoux_2015_nSecLBD_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 25,78 25,47 27,72 lod 6.3 16.6

0 Targeting