Protein : Qrob_P0206750.2 Q. robur
Protein Identifier  ? Qrob_P0206750.2 Organism . Name  Quercus robur
Score  86.1 Score Type  egn
Protein Description  (M=5) PTHR11552//PTHR11552:SF59 - GLUCOSE-METHANOL-CHOLINE (GMC) OXIDOREDUCTASE // SUBFAMILY NOT NAMED Gene Prediction Quality  validated
Protein length 

Sequence

Length: 632  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0050660 flavin adenine dinucleotide binding Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2.
GO:0016614 oxidoreductase activity, acting on CH-OH group of donors Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group act as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.

38 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cam:101513152 1 631 + 631 Gaps:61 96.61 590 67.19 0.0 protein HOTHEAD-like
blastp_kegg lcl|aly:ARALYDRAFT_684746 12 631 + 620 Gaps:72 98.21 560 60.36 0.0 hypothetical protein
blastp_kegg lcl|ath:AT5G51930 12 631 + 620 Gaps:81 92.96 582 60.44 0.0 Glucose-methanol-choline (GMC) oxidoreductase family protein
blastp_kegg lcl|crb:CARUB_v10028260mg 22 631 + 610 Gaps:84 91.13 586 58.24 0.0 hypothetical protein
blastp_kegg lcl|pmum:103333269 1 631 + 631 Gaps:4 95.70 582 71.10 0.0 protein HOTHEAD-like
blastp_kegg lcl|pvu:PHAVU_007G066200g 1 631 + 631 Gaps:2 95.17 580 67.03 5e-174 hypothetical protein
blastp_kegg lcl|tcc:TCM_016166 6 631 + 626 Gaps:13 96.17 574 66.30 8e-174 Glucose-methanol-choline oxidoreductase family protein isoform 1
blastp_kegg lcl|pper:PRUPE_ppa003422mg 1 631 + 631 Gaps:14 96.53 576 66.01 2e-172 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1497790 5 631 + 627 Gaps:11 96.36 577 68.35 1e-171 glucose-methanol-choline (gmc) oxidoreductase putative (EC:4.1.2.10)
blastp_kegg lcl|gmx:100780453 8 631 + 624 Gaps:17 95.96 570 68.56 1e-169 protein HOTHEAD-like
blastp_pdb 3gdp_B 32 631 + 600 Gaps:21 94.05 521 42.45 1e-79 mol:protein length:521 R-oxynitrile lyase isoenzyme 1
blastp_pdb 3gdp_A 32 631 + 600 Gaps:21 94.05 521 42.45 1e-79 mol:protein length:521 R-oxynitrile lyase isoenzyme 1
blastp_pdb 3gdn_B 32 631 + 600 Gaps:21 94.05 521 42.45 1e-79 mol:protein length:521 R-oxynitrile lyase isoenzyme 1
blastp_pdb 3gdn_A 32 631 + 600 Gaps:21 94.05 521 42.45 1e-79 mol:protein length:521 R-oxynitrile lyase isoenzyme 1
blastp_pdb 1ju2_B 32 631 + 600 Gaps:21 91.42 536 42.45 2e-79 mol:protein length:536 hydroxynitrile lyase
blastp_pdb 1ju2_A 32 631 + 600 Gaps:21 91.42 536 42.45 2e-79 mol:protein length:536 hydroxynitrile lyase
blastp_pdb 3nne_H 46 363 + 318 Gaps:54 61.54 546 28.57 3e-12 mol:protein length:546 Choline oxidase
blastp_pdb 3nne_G 46 363 + 318 Gaps:54 61.54 546 28.57 3e-12 mol:protein length:546 Choline oxidase
blastp_pdb 3nne_F 46 363 + 318 Gaps:54 61.54 546 28.57 3e-12 mol:protein length:546 Choline oxidase
blastp_pdb 3nne_E 46 363 + 318 Gaps:54 61.54 546 28.57 3e-12 mol:protein length:546 Choline oxidase
blastp_uniprot_sprot sp|Q9S746|HTH_ARATH 46 631 + 586 Gaps:5 79.29 594 57.96 2e-119 Protein HOTHEAD OS Arabidopsis thaliana GN HTH PE 1 SV 1
blastp_uniprot_sprot sp|Q9SSM2|MDLL_ARATH 33 631 + 599 Gaps:31 86.05 552 52.63 5e-103 (R)-mandelonitrile lyase-like OS Arabidopsis thaliana GN At1g73050 PE 2 SV 1
blastp_uniprot_sprot sp|P52707|MDL3_PRUSE 32 631 + 600 Gaps:14 80.45 573 44.90 4e-81 (R)-mandelonitrile lyase 3 OS Prunus serotina GN MDL3 PE 2 SV 1
blastp_uniprot_sprot sp|O24243|MDL1_PRUDU 33 631 + 599 Gaps:21 88.55 559 42.22 1e-79 (R)-mandelonitrile lyase 1 OS Prunus dulcis GN MDL1 PE 2 SV 1
blastp_uniprot_sprot sp|Q945K2|MDL2_PRUDU 32 631 + 600 Gaps:21 87.03 563 42.65 6e-79 (R)-mandelonitrile lyase 2 OS Prunus dulcis GN MDL2 PE 1 SV 1
blastp_uniprot_sprot sp|P52706|MDL1_PRUSE 33 631 + 599 Gaps:21 86.68 563 43.24 2e-78 (R)-mandelonitrile lyase 1 OS Prunus serotina GN MDL1 PE 1 SV 1
blastp_uniprot_sprot sp|O50048|MDL2_PRUSE 20 631 + 612 Gaps:21 83.51 576 43.87 7e-77 (R)-mandelonitrile lyase 2 OS Prunus serotina GN MDL2 PE 2 SV 1
blastp_uniprot_sprot sp|O82784|MDL4_PRUSE 33 631 + 599 Gaps:24 86.24 574 41.82 4e-73 (R)-mandelonitrile lyase 4 OS Prunus serotina GN MDL4 PE 2 SV 1
blastp_uniprot_sprot sp|Q47944|SDH_GLUOY 46 321 + 276 Gaps:55 54.43 531 33.91 5e-19 L-sorbose 1-dehydrogenase OS Gluconobacter oxydans PE 3 SV 1
blastp_uniprot_sprot sp|P18173|DHGL_DROME 46 321 + 276 Gaps:47 47.52 625 29.97 1e-16 Glucose dehydrogenase [FAD quinone] OS Drosophila melanogaster GN Gld PE 3 SV 3

19 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 486 630 145 PF05199 none GMC oxidoreductase IPR007867
Phobius 26 631 606 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PANTHER 26 389 364 PTHR11552:SF59 none none none
PANTHER 454 631 178 PTHR11552:SF59 none none none
SUPERFAMILY 586 631 46 SSF51905 none none none
SUPERFAMILY 44 315 272 SSF51905 none none none
Pfam 46 322 277 PF00732 none GMC oxidoreductase IPR000172
Phobius 1 25 25 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 474 587 114 SSF54373 none none none
Phobius 1 6 6 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Gene3D 44 162 119 G3DSA:3.50.50.60 none none none
Gene3D 496 510 15 G3DSA:3.50.50.60 none none none
Gene3D 208 329 122 G3DSA:3.50.50.60 none none none
Gene3D 582 631 50 G3DSA:3.50.50.60 none none none
PANTHER 454 631 178 PTHR11552 none none none
Phobius 7 17 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 18 25 8 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
ProSitePatterns 281 295 15 PS00624 none GMC oxidoreductases signature 2. IPR000172
PANTHER 26 389 364 PTHR11552 none none none

3 Localization

Analysis Start End Length
TMHMM 5 24 19
SignalP_EUK 1 25 24
SignalP_GRAM_POSITIVE 1 25 24

9 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2004_QTL4_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,45 0 27,45 lod 4,5 10,6
Bourran_2000_2002_QTL7_Delta.F Qrob_Chr09 9 v_5944_442 s_1BA1PC_866 23.51 10,96 35,74 lod 4.1466 0.041
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2003_QTL13_peak_Bud_burst_A4 Qrob_Chr09 9 s_1AP8MN_635 s_1A3QQ_692 18,18 10,88 25,88 lod 3,4 7,2
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
Bourran2_2004_QTL14_peak_Bud_burst_A4 Qrob_Chr09 9 s_1BY6BQ_440 s_1AOIKO_756 16,83 10,33 22,33 lod 3,8 9
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran2_2015_nSecLBD_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 35,81 34,88 37,45 lod 4.4 10.4
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 25   Secretory pathway 2 0.902 0.114 NON-PLANT 25