Protein : Qrob_P0204690.2 Q. robur
Protein Identifier  ? Qrob_P0204690.2 Organism . Name  Quercus robur
Score  89.1 Score Type  egn
Protein Description  (M=1) K09494 - T-complex protein 1 subunit beta Gene Prediction Quality  validated
Protein length 

Sequence

Length: 530  
Kegg Orthology  K09494
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0051082 unfolded protein binding Interacting selectively and non-covalently with an unfolded protein.

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|cit:102628718 1 529 + 529 Gaps:2 100.00 527 95.45 0.0 T-complex protein 1 subunit beta-like
blastp_kegg lcl|csv:101206611 1 529 + 529 Gaps:2 100.00 527 95.07 0.0 CCT2 chaperonin containing TCP1 subunit 2 (beta)
blastp_kegg lcl|cmo:103498633 1 529 + 529 Gaps:2 100.00 527 95.07 0.0 T-complex protein 1 subunit beta
blastp_kegg lcl|cic:CICLE_v10000836mg 1 529 + 529 Gaps:2 100.00 527 95.07 0.0 hypothetical protein
blastp_kegg lcl|pmum:103321172 1 529 + 529 Gaps:2 100.00 527 95.07 0.0 T-complex protein 1 subunit beta
blastp_kegg lcl|mdm:103450335 1 529 + 529 Gaps:2 100.00 527 94.69 0.0 T-complex protein 1 subunit beta-like
blastp_kegg lcl|pper:PRUPE_ppa004143mg 1 529 + 529 Gaps:2 100.00 527 94.69 0.0 hypothetical protein
blastp_kegg lcl|pxb:103927221 1 529 + 529 Gaps:2 100.00 527 94.31 0.0 T-complex protein 1 subunit beta
blastp_kegg lcl|tcc:TCM_034333 1 529 + 529 Gaps:2 100.00 527 93.74 0.0 TCP-1/cpn60 chaperonin family protein isoform 1
blastp_kegg lcl|csv:101225061 1 529 + 529 Gaps:9 100.00 534 93.82 0.0 CCT2 chaperonin containing TCP1 subunit 2 (beta)
blastp_pdb 4a13_P 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_O 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_N 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_M 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_L 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_K 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_J 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_I 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_H 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_pdb 4a13_G 11 523 + 513 Gaps:2 99.61 513 70.65 0.0 mol:protein length:513 T-COMPLEX PROTEIN 1 SUBUNIT BETA
blastp_uniprot_sprot sp|Q4R6F8|TCPB_MACFA 1 525 + 525 Gaps:2 97.76 535 70.17 0.0 T-complex protein 1 subunit beta OS Macaca fascicularis GN CCT2 PE 2 SV 3
blastp_uniprot_sprot sp|P78371|TCPB_HUMAN 1 525 + 525 Gaps:2 97.76 535 70.17 0.0 T-complex protein 1 subunit beta OS Homo sapiens GN CCT2 PE 1 SV 4
blastp_uniprot_sprot sp|Q3ZBH0|TCPB_BOVIN 1 525 + 525 Gaps:2 97.76 535 69.79 0.0 T-complex protein 1 subunit beta OS Bos taurus GN CCT2 PE 1 SV 3
blastp_uniprot_sprot sp|Q5XIM9|TCPB_RAT 1 525 + 525 Gaps:2 97.76 535 70.17 0.0 T-complex protein 1 subunit beta OS Rattus norvegicus GN Cct2 PE 1 SV 3
blastp_uniprot_sprot sp|P80314|TCPB_MOUSE 1 525 + 525 Gaps:2 97.76 535 69.60 0.0 T-complex protein 1 subunit beta OS Mus musculus GN Cct2 PE 1 SV 4
blastp_uniprot_sprot sp|Q10147|TCPB_SCHPO 5 526 + 522 Gaps:3 98.48 527 67.05 0.0 Probable T-complex protein 1 subunit beta OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN cct2 PE 3 SV 1
blastp_uniprot_sprot sp|Q54ES9|TCPB_DICDI 6 527 + 522 Gaps:2 97.74 532 65.19 0.0 T-complex protein 1 subunit beta OS Dictyostelium discoideum GN cct2 PE 1 SV 1
blastp_uniprot_sprot sp|P39076|TCPB_YEAST 5 523 + 519 Gaps:4 98.10 527 63.44 0.0 T-complex protein 1 subunit beta OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN CCT2 PE 1 SV 1
blastp_uniprot_sprot sp|P47207|TCPB_CAEEL 5 525 + 521 Gaps:7 97.92 529 62.93 0.0 T-complex protein 1 subunit beta OS Caenorhabditis elegans GN cct-2 PE 1 SV 2
blastp_uniprot_sprot sp|Q8SQP2|TCPB_ENCCU 11 525 + 515 Gaps:22 97.44 508 48.48 3e-148 T-complex protein 1 subunit beta OS Encephalitozoon cuniculi (strain GB-M1) GN CCT2 PE 1 SV 1

21 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PRINTS 56 74 19 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
PRINTS 403 415 13 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
PRINTS 32 48 17 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
PRINTS 88 107 20 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
PRINTS 369 391 23 PR00304 none Tailless complex polypeptide 1 (chaperone) signature IPR017998
ProSitePatterns 88 96 9 PS00995 "Reactome:REACT_17015" Chaperonins TCP-1 signature 3. IPR002194
SUPERFAMILY 154 214 61 SSF54849 none none none
SUPERFAMILY 367 401 35 SSF54849 none none none
SUPERFAMILY 401 521 121 SSF48592 none none none
SUPERFAMILY 13 145 133 SSF48592 none none none
ProSitePatterns 35 47 13 PS00750 "Reactome:REACT_17015" Chaperonins TCP-1 signature 1. IPR002194
Pfam 30 520 491 PF00118 none TCP-1/cpn60 chaperonin family IPR002423
Gene3D 370 399 30 G3DSA:3.30.260.10 none none IPR027410
Gene3D 153 209 57 G3DSA:3.30.260.10 none none IPR027410
TIGRFAM 6 525 520 TIGR02341 none chap_CCT_beta: T-complex protein 1, beta subunit IPR012716
SUPERFAMILY 208 374 167 SSF52029 none none IPR027409
Gene3D 210 369 160 G3DSA:3.50.7.10 none none IPR027409
PANTHER 6 527 522 PTHR11353 none none IPR002423
ProSitePatterns 58 74 17 PS00751 "Reactome:REACT_17015" Chaperonins TCP-1 signature 2. IPR002194
Gene3D 6 142 137 G3DSA:1.10.560.10 none none IPR027413
Gene3D 400 522 123 G3DSA:1.10.560.10 none none IPR027413

0 Localization

15 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

0 Targeting