4 GO Terms
Identifier | Name | Description |
---|---|---|
GO:0006508 | proteolysis | The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds. |
GO:0008236 | serine-type peptidase activity | Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
GO:0004252 | serine-type endopeptidase activity | Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
GO:0070008 | serine-type exopeptidase activity | Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a catalytic mechanism that involves a catalytic triad consisting of a serine nucleophile that is activated by a proton relay involving an acidic residue (e.g. aspartate or glutamate) and a basic residue (usually histidine). |
38 Blast
Analysis | Hit | Start | End | Strand | Length | Note | Hit Coverage | Hit Length | Hit Pident | E Val | Hit Description |
---|---|---|---|---|---|---|---|---|---|---|---|
blastp_kegg | lcl|fve:101293840 | 79 | 809 | + | 731 | Gaps:3 | 100.00 | 730 | 83.97 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|pmum:103321175 | 79 | 809 | + | 731 | none | 100.00 | 731 | 82.90 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|mdm:103413820 | 77 | 809 | + | 733 | Gaps:4 | 93.10 | 783 | 83.40 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|pper:PRUPE_ppa001441mg | 65 | 809 | + | 745 | Gaps:1 | 89.86 | 828 | 81.59 | 0.0 | hypothetical protein |
blastp_kegg | lcl|vvi:100267810 | 79 | 809 | + | 731 | none | 100.00 | 731 | 82.76 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|pxb:103926671 | 79 | 809 | + | 731 | none | 100.00 | 731 | 82.90 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|tcc:TCM_046889 | 29 | 809 | + | 781 | Gaps:15 | 99.37 | 789 | 79.34 | 0.0 | Prolyl oligopeptidase family protein |
blastp_kegg | lcl|pxb:103927233 | 79 | 809 | + | 731 | Gaps:2 | 100.00 | 733 | 82.81 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|cmo:103493792 | 68 | 809 | + | 742 | none | 94.76 | 783 | 81.81 | 0.0 | prolyl endopeptidase-like |
blastp_kegg | lcl|csv:101220524 | 79 | 809 | + | 731 | none | 100.00 | 731 | 82.76 | 0.0 | prolyl endopeptidase-like |
blastp_pdb | 4an1_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 PROLYL ENDOPEPTIDASE |
blastp_pdb | 4an0_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 PROLYL ENDOPEPTIDASE |
blastp_pdb | 4amz_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 PROLYL ENDOPEPTIDASE |
blastp_pdb | 4amy_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 PROLYL ENDOPEPTIDASE |
blastp_pdb | 3eq9_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 Prolyl endopeptidase |
blastp_pdb | 3eq8_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 Prolyl endopeptidase |
blastp_pdb | 3eq7_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 Prolyl endopeptidase |
blastp_pdb | 2xdw_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 PROLYL ENDOPEPTIDASE |
blastp_pdb | 1qfs_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 PROTEIN (PROLYL OLIGOPEPTIDASE) |
blastp_pdb | 1qfm_A | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | mol:protein length:710 PROTEIN (PROLYL OLIGOPEPTIDASE) |
blastp_uniprot_sprot | sp|P48147|PPCE_HUMAN | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | Prolyl endopeptidase OS Homo sapiens GN PREP PE 1 SV 2 |
blastp_uniprot_sprot | sp|Q9QUR6|PPCE_MOUSE | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.22 | 0.0 | Prolyl endopeptidase OS Mus musculus GN Prep PE 2 SV 1 |
blastp_uniprot_sprot | sp|P23687|PPCE_PIG | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | Prolyl endopeptidase OS Sus scrofa GN PREP PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q9XTA2|PPCE_BOVIN | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | Prolyl endopeptidase OS Bos taurus GN PREP PE 2 SV 1 |
blastp_uniprot_sprot | sp|O70196|PPCE_RAT | 88 | 807 | + | 720 | Gaps:18 | 99.44 | 710 | 57.08 | 0.0 | Prolyl endopeptidase OS Rattus norvegicus GN Prep PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q86AS5|PPCE_DICDI | 89 | 805 | + | 717 | Gaps:81 | 99.21 | 760 | 38.33 | 2e-159 | Prolyl endopeptidase OS Dictyostelium discoideum GN prep PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q06903|PPCE_AERHY | 89 | 798 | + | 710 | Gaps:52 | 97.10 | 690 | 43.58 | 3e-159 | Prolyl endopeptidase OS Aeromonas hydrophila PE 1 SV 2 |
blastp_uniprot_sprot | sp|P27028|PPCE_ELIME | 89 | 798 | + | 710 | Gaps:55 | 94.89 | 705 | 42.15 | 2e-158 | Prolyl endopeptidase OS Elizabethkingia meningoseptica GN f1pep1 PE 1 SV 1 |
blastp_uniprot_sprot | sp|P27195|PPCF_ELIMR | 88 | 798 | + | 711 | Gaps:51 | 95.04 | 705 | 39.55 | 4e-150 | Prolyl endopeptidase OS Elizabethkingia miricola PE 1 SV 1 |
blastp_uniprot_sprot | sp|Q59536|PTRB_MORLA | 89 | 803 | + | 715 | Gaps:85 | 98.26 | 690 | 27.58 | 3e-53 | Protease 2 OS Moraxella lacunata GN ptrB PE 3 SV 1 |
13 Domain Motifs
Analysis | Begin | End | Length | Domain Identifier | Cross Ref | Description | Inter Pro |
---|---|---|---|---|---|---|---|
Pfam | 574 | 805 | 232 | PF00326 | none | Prolyl oligopeptidase family | IPR001375 |
PANTHER | 86 | 809 | 724 | PTHR11757:SF2 | none | none | none |
Gene3D | 528 | 803 | 276 | G3DSA:3.40.50.1820 | none | none | IPR029058 |
Pfam | 92 | 508 | 417 | PF02897 | none | Prolyl oligopeptidase, N-terminal beta-propeller domain | IPR023302 |
SUPERFAMILY | 528 | 753 | 226 | SSF53474 | none | none | IPR029058 |
Gene3D | 160 | 519 | 360 | G3DSA:2.130.10.120 | none | none | IPR023302 |
SUPERFAMILY | 88 | 511 | 424 | SSF50993 | none | none | none |
PANTHER | 86 | 809 | 724 | PTHR11757 | none | none | IPR002470 |
PRINTS | 559 | 577 | 19 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 586 | 610 | 25 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 614 | 633 | 20 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 726 | 748 | 23 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
PRINTS | 644 | 664 | 21 | PR00862 | none | Prolyl oligopeptidase serine protease (S9A) signature | IPR002470 |
15 Qtllist
Qtl Name | Chromosome Name | Linkage Group | Prox Marker | Dist Marker | Position QTL | Pos One | Pos Two | Test Type | Test Value | R 2 |
---|---|---|---|---|---|---|---|---|---|---|
Bourran1_2003_QTL2_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 87 | lod | 3,3 | 8,7 |
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf | Qrob_Chr02 | 2 | s_1AQA4Z_1644 | s_1AK5QX_947 | 53.67 | 14,01 | 79,68 | lod | 5.6594 | 0.03 |
Bourran1_2004_QTL2_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1AW12F_382 | s_1A77MR_223 | 42 | 6 | 64 | lod | 3,6 | 9,6 |
Bourran2_2002_QTL9_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1BFNDA_375 | s_1A3VA1_2139 | 32,5 | 17 | 62 | lod | 3,1 | 4,2 |
Bourran2_2003_QTL8_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1ANG6_1446 | v_11270_161 | 40 | 0 | 72 | lod | 4,4 | 9,9 |
Bourran2_2014_nP_A4 | Qrob_Chr11 | 11 | s_1B58GB_1413 | s_1A5BYY_1671 | 11,15 | 0 | 42,38 | lod | 1,8913 | 4,5 |
Bourran2_2015_nPriLBD_A4 | Qrob_Chr02 | 2 | s_1CP5DI_1183 | s_1A63ZX_1277 | 24,87 | 24,63 | 26,18 | lod | 3.8 | 7 |
Bourran2_2015_nEpis_A4 | Qrob_Chr09 | 9 | v_15847_485 | v_8329_369 | 34,94 | 34,88 | 37,45 | lod | 3.1 | 7 |
Bourran1_2003_QTL1_peak_Bud_burst_3P | Qrob_Chr02 | 2 | s_1AR8KI_1183 | s_1B0QB1_473 | 22 | 6 | 41 | lod | 4,2 | 11,5 |
Bourran1_2004_QTL3_peak_Bud_burst_A4 | Qrob_Chr02 | 2 | s_1B0H8U_259 | s_1CB1VL_554 | 17 | 0 | 46 | lod | 2,9 | 6,4 |
Bourran2_2015_nEpiBC_A4 | Qrob_Chr07 | 7 | s_1DP9TW_798 | v_8128_173 | 22,61 | 22,14 | 22,73 | lod | 3.1 | 8.5 |
Champenoux_2015_nEpis_A4 | Qrob_Chr02 | 2 | s_1BAGIZ_823 | s_1BN4CB_644 | 23,06 | 23,06 | 23,06 | lod | 4.9 | 11 |
Champenoux_2015_nP_A4 | Qrob_Chr02 | 2 | s_1BN4CB_644 | v_508_128 | 23,76 | 23,06 | 24,51 | lod | 2.8 | 6.2 |
Champenoux_2015_nPriLBD_A4 | Qrob_Chr02 | 2 | s_1CP5DI_1183 | s_1A63ZX_1277 | 25,35 | 24,63 | 26,18 | lod | 4.0 | 8.7 |
Champenoux_2015_nSecLBD_A4 | Qrob_Chr02 | 2 | s_1AN4ZM_1665 | v_8587_238 | 18,52 | 18,89 | 18,27 | lod | 3.2 | 7.4 |