Protein : Qrob_P0204240.2 Q. robur
Protein Identifier  ? Qrob_P0204240.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR10438:SF247 - THIOREDOXIN-LIKE PROTEIN CDSP32, CHLOROPLASTIC (PTHR10438:SF247) Alias (in v1)  Qrob_P0298710.1
Code Enzyme  EC:1.6.5.4 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 299  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

35 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_034302 1 298 + 298 Gaps:5 83.43 356 81.14 2e-172 Chloroplastic drought-induced stress protein of 32 kD
blastp_kegg lcl|pop:POPTR_0005s26700g 1 298 + 298 Gaps:4 99.67 299 80.87 8e-172 POPTRDRAFT_206527 hypothetical protein
blastp_kegg lcl|rcu:RCOM_1599540 1 298 + 298 Gaps:4 99.67 299 77.52 1e-166 hypothetical protein
blastp_kegg lcl|pper:PRUPEppa1027211mg 1 298 + 298 Gaps:5 99.67 300 79.93 1e-165 hypothetical protein
blastp_kegg lcl|pmum:103321193 1 298 + 298 Gaps:5 99.67 300 79.60 1e-165 thioredoxin-like protein CDSP32 chloroplastic
blastp_kegg lcl|vvi:100259132 1 298 + 298 Gaps:5 99.66 298 80.13 3e-165 thioredoxin-like protein CDSP32 chloroplastic
blastp_kegg lcl|cic:CICLE_v10001692mg 1 298 + 298 Gaps:6 85.63 348 79.87 4e-164 hypothetical protein
blastp_kegg lcl|cit:102621762 1 298 + 298 Gaps:6 85.63 348 79.87 4e-164 thioredoxin-like protein CDSP32 chloroplastic-like
blastp_kegg lcl|pxb:103927370 1 298 + 298 Gaps:8 99.67 299 78.19 4e-161 thioredoxin-like protein CDSP32 chloroplastic
blastp_kegg lcl|mdm:103440233 1 298 + 298 Gaps:6 99.67 299 78.19 6e-161 thioredoxin-like protein CDSP32 chloroplastic
blastp_pdb 2vim_A 187 293 + 107 Gaps:6 97.12 104 37.62 7e-13 mol:protein length:104 THIOREDOXIN
blastp_pdb 2vlv_B 184 289 + 106 Gaps:4 83.61 122 33.33 2e-10 mol:protein length:122 THIOREDOXIN H ISOFORM 2.
blastp_pdb 2vlv_A 184 289 + 106 Gaps:4 83.61 122 33.33 2e-10 mol:protein length:122 THIOREDOXIN H ISOFORM 2.
blastp_pdb 2vlu_B 184 289 + 106 Gaps:4 83.61 122 33.33 2e-10 mol:protein length:122 THIOREDOXIN H ISOFORM 2.
blastp_pdb 2vlu_A 184 289 + 106 Gaps:4 83.61 122 33.33 2e-10 mol:protein length:122 THIOREDOXIN H ISOFORM 2.
blastp_pdb 2vlt_B 184 289 + 106 Gaps:4 83.61 122 33.33 2e-10 mol:protein length:122 THIOREDOXIN H ISOFORM 2.
blastp_pdb 2vlt_A 184 289 + 106 Gaps:4 83.61 122 33.33 2e-10 mol:protein length:122 THIOREDOXIN H ISOFORM 2.
blastp_pdb 2vm2_D 182 294 + 113 Gaps:12 92.37 118 32.11 1e-09 mol:protein length:118 THIOREDOXIN H ISOFORM 1.
blastp_pdb 2vm2_C 182 294 + 113 Gaps:12 92.37 118 32.11 1e-09 mol:protein length:118 THIOREDOXIN H ISOFORM 1.
blastp_pdb 2vm2_B 182 294 + 113 Gaps:12 92.37 118 32.11 1e-09 mol:protein length:118 THIOREDOXIN H ISOFORM 1.
blastp_uniprot_sprot sp|Q9SGS4|CDSP_ARATH 1 298 + 298 Gaps:7 99.67 302 69.44 4e-143 Thioredoxin-like protein CDSP32 chloroplastic OS Arabidopsis thaliana GN CDSP32 PE 1 SV 1
blastp_uniprot_sprot sp|Q84NN4|CDSP_ORYSJ 69 298 + 230 Gaps:1 76.74 301 78.35 9e-131 Thioredoxin-like protein CDSP32 chloroplastic OS Oryza sativa subsp. japonica GN CDSP32 PE 2 SV 1
blastp_uniprot_sprot sp|Q6Z4I3|TRH21_ORYSJ 180 285 + 106 Gaps:4 73.91 138 35.29 1e-10 Thioredoxin H2-1 OS Oryza sativa subsp. japonica GN Os07g0190800 PE 2 SV 1
blastp_uniprot_sprot sp|Q39241|TRXH5_ARATH 184 295 + 112 Gaps:4 91.53 118 30.56 1e-10 Thioredoxin H5 OS Arabidopsis thaliana GN TRX5 PE 1 SV 1
blastp_uniprot_sprot sp|Q42403|TRXH3_ARATH 184 295 + 112 Gaps:6 91.53 118 35.19 2e-10 Thioredoxin H3 OS Arabidopsis thaliana GN TRX3 PE 1 SV 1
blastp_uniprot_sprot sp|Q39239|TRXH4_ARATH 184 295 + 112 Gaps:3 91.60 119 30.28 4e-10 Thioredoxin H4 OS Arabidopsis thaliana GN TRX4 PE 3 SV 2
blastp_uniprot_sprot sp|O64394|TRXH_WHEAT 184 289 + 106 Gaps:4 80.31 127 33.33 4e-09 Thioredoxin H-type OS Triticum aestivum PE 2 SV 3
blastp_uniprot_sprot sp|Q07090|TRXH2_TOBAC 203 292 + 90 Gaps:4 72.88 118 38.37 6e-09 Thioredoxin H-type 2 OS Nicotiana tabacum PE 3 SV 1
blastp_uniprot_sprot sp|P29448|TRXH1_ARATH 184 292 + 109 Gaps:4 92.11 114 29.52 7e-09 Thioredoxin H1 OS Arabidopsis thaliana GN TRX1 PE 1 SV 1
blastp_uniprot_sprot sp|Q39362|TRXH2_BRANA 201 295 + 95 Gaps:3 77.31 119 31.52 8e-09 Thioredoxin H-type 2 OS Brassica napus GN THL-2 PE 2 SV 1

9 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 81 297 217 PTHR10438:SF247 none none none
Pfam 203 285 83 PF00085 none Thioredoxin IPR013766
Pfam 76 164 89 PF00085 none Thioredoxin IPR013766
ProSiteProfiles 52 202 151 PS51352 none Thioredoxin domain profile. IPR012336
SUPERFAMILY 67 166 100 SSF52833 none none IPR012336
SUPERFAMILY 178 286 109 SSF52833 none none IPR012336
PANTHER 81 297 217 PTHR10438 none none IPR005746
Gene3D 184 289 106 G3DSA:3.40.30.10 none none IPR012336
Gene3D 72 170 99 G3DSA:3.40.30.10 none none IPR012336

0 Localization

15 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
Bourran2_2015_nEpis_A4 Qrob_Chr09 9 v_15847_485 v_8329_369 34,94 34,88 37,45 lod 3.1 7
Bourran1_2003_QTL1_peak_Bud_burst_3P Qrob_Chr02 2 s_1AR8KI_1183 s_1B0QB1_473 22 6 41 lod 4,2 11,5
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4
Bourran2_2015_nEpiBC_A4 Qrob_Chr07 7 s_1DP9TW_798 v_8128_173 22,61 22,14 22,73 lod 3.1 8.5
Champenoux_2015_nEpis_A4 Qrob_Chr02 2 s_1BAGIZ_823 s_1BN4CB_644 23,06 23,06 23,06 lod 4.9 11
Champenoux_2015_nP_A4 Qrob_Chr02 2 s_1BN4CB_644 v_508_128 23,76 23,06 24,51 lod 2.8 6.2
Champenoux_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 25,35 24,63 26,18 lod 4.0 8.7
Champenoux_2015_nSecLBD_A4 Qrob_Chr02 2 s_1AN4ZM_1665 v_8587_238 18,52 18,89 18,27 lod 3.2 7.4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 110   Mitochondrion 5 0.046 0.556 NON-PLANT 110