Protein : Qrob_P0203320.2 Q. robur
Protein Identifier  ? Qrob_P0203320.2 Organism . Name  Quercus robur
Protein Description  (M=1) PTHR10438//PTHR10438:SF218 - THIOREDOXIN // SUBFAMILY NOT NAMED Alias (in v1)  Qrob_P0444300.1
Code Enzyme  EC:1.8.1.8 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 177  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0015035 protein disulfide oxidoreductase activity Catalysis of the reaction: a protein with reduced sulfide groups = a protein with oxidized disulfide bonds.
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0006662 glycerol ether metabolic process The chemical reactions and pathways involving glycerol ethers, any anhydride formed between two organic hydroxy compounds, one of which is glycerol.

49 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100245159 40 176 + 137 none 78.29 175 79.56 3e-73 thioredoxin Y1 chloroplastic-like
blastp_kegg lcl|pper:PRUPE_ppa012274mg 1 176 + 176 Gaps:1 100.00 177 67.23 4e-72 hypothetical protein
blastp_kegg lcl|pop:POPTR_0005s21550g 1 176 + 176 Gaps:6 100.00 170 72.35 7e-72 POPTRDRAFT_818592 thioredoxin family protein
blastp_kegg lcl|pmum:103336572 1 176 + 176 Gaps:1 100.00 177 67.23 9e-72 thioredoxin Y1 chloroplastic
blastp_kegg lcl|gmx:100500683 55 176 + 122 none 69.71 175 83.61 2e-71 uncharacterized LOC100500683
blastp_kegg lcl|pvu:PHAVU_007G080600g 22 176 + 155 Gaps:7 85.71 175 74.00 6e-71 hypothetical protein
blastp_kegg lcl|rcu:RCOM_0959340 1 176 + 176 Gaps:6 100.00 170 67.06 1e-69 thioredoxin m(mitochondrial)-type putative (EC:5.3.4.1)
blastp_kegg lcl|gmx:100306580 55 176 + 122 none 69.71 175 80.33 1e-69 uncharacterized LOC100306580
blastp_kegg lcl|fve:101291981 40 176 + 137 none 77.40 177 73.72 4e-68 thioredoxin Y1 chloroplastic-like
blastp_kegg lcl|tcc:TCM_035632 1 176 + 176 Gaps:4 100.00 174 68.39 8e-66 Thioredoxin Y1 isoform 1
blastp_pdb 2l59_A 71 170 + 100 none 86.21 116 41.00 9e-25 mol:protein length:116 Thioredoxin
blastp_pdb 2l4q_A 71 170 + 100 none 86.21 116 41.00 9e-25 mol:protein length:116 Thioredoxin
blastp_pdb 2i1u_A 71 170 + 100 none 82.64 121 41.00 1e-24 mol:protein length:121 Thioredoxin
blastp_pdb 3o6t_D 71 170 + 100 none 84.75 118 40.00 3e-23 mol:protein length:118 Thioredoxin
blastp_pdb 3o6t_C 71 170 + 100 none 84.75 118 40.00 3e-23 mol:protein length:118 Thioredoxin
blastp_pdb 3o6t_B 71 170 + 100 none 84.75 118 40.00 3e-23 mol:protein length:118 Thioredoxin
blastp_pdb 3o6t_A 71 170 + 100 none 84.75 118 40.00 3e-23 mol:protein length:118 Thioredoxin
blastp_pdb 3nof_B 71 170 + 100 none 84.75 118 40.00 3e-23 mol:protein length:118 Thioredoxin TrxC
blastp_pdb 3nof_A 71 170 + 100 none 84.75 118 40.00 3e-23 mol:protein length:118 Thioredoxin TrxC
blastp_pdb 1dby_A 76 172 + 97 none 90.65 107 37.11 6e-23 mol:protein length:107 CHLOROPLAST THIOREDOXIN M CH2
blastp_uniprot_sprot sp|Q6NPF9|TRXY1_ARATH 9 175 + 167 Gaps:8 95.93 172 69.09 6e-67 Thioredoxin Y1 chloroplastic OS Arabidopsis thaliana GN At1g76760 PE 2 SV 1
blastp_uniprot_sprot sp|Q8L7S9|TRXY2_ARATH 22 176 + 155 Gaps:5 92.22 167 66.88 2e-62 Thioredoxin Y2 chloroplastic OS Arabidopsis thaliana GN At1g43560 PE 2 SV 1
blastp_uniprot_sprot sp|Q5JMR9|TRXY_ORYSJ 57 174 + 118 none 70.24 168 72.88 6e-57 Thioredoxin Y chloroplastic OS Oryza sativa subsp. japonica GN Os01g0963400 PE 3 SV 2
blastp_uniprot_sprot sp|P52232|THIO1_SYNY3 69 158 + 90 none 85.71 105 62.22 1e-38 Thioredoxin-like protein slr0233 OS Synechocystis sp. (strain PCC 6803 / Kazusa) GN slr0233 PE 1 SV 1
blastp_uniprot_sprot sp|P0A4L2|THIO1_NOSSO 69 172 + 104 none 97.20 107 42.31 6e-26 Thioredoxin-1 OS Nostoc sp. (strain ATCC 29151 / PCC 7119) GN trxA PE 1 SV 2
blastp_uniprot_sprot sp|P0A4L1|THIO1_NOSS1 69 172 + 104 none 97.20 107 42.31 6e-26 Thioredoxin-1 OS Nostoc sp. (strain PCC 7120 / UTEX 2576) GN trxA PE 3 SV 2
blastp_uniprot_sprot sp|P12243|THIO1_SYNE7 69 172 + 104 none 97.20 107 40.38 6e-25 Thioredoxin-1 OS Synechococcus elongatus (strain PCC 7942) GN trxA PE 3 SV 2
blastp_uniprot_sprot sp|P0A616|THIO_MYCTU 71 170 + 100 none 86.21 116 41.00 3e-24 Thioredoxin OS Mycobacterium tuberculosis GN trxA PE 1 SV 2
blastp_uniprot_sprot sp|P0A617|THIO_MYCBO 71 170 + 100 none 86.21 116 41.00 3e-24 Thioredoxin OS Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN trxA PE 3 SV 2
blastp_uniprot_sprot sp|P50338|THIO_GRIPA 75 173 + 99 none 90.83 109 41.41 8e-24 Thioredoxin OS Griffithsia pacifica GN trxA PE 3 SV 2

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 89 107 19 PS00194 none Thioredoxin family active site. IPR017937
SUPERFAMILY 73 173 101 SSF52833 none none IPR012336
PRINTS 88 96 9 PR00421 none Thioredoxin family signature none
PRINTS 96 105 10 PR00421 none Thioredoxin family signature none
PRINTS 136 147 12 PR00421 none Thioredoxin family signature none
Pfam 71 170 100 PF00085 none Thioredoxin IPR013766
ProSiteProfiles 53 173 121 PS51352 none Thioredoxin domain profile. IPR012336
PANTHER 9 175 167 PTHR10438:SF218 none none none
Gene3D 72 171 100 G3DSA:3.40.30.10 none none IPR012336
PANTHER 9 175 167 PTHR10438 none none IPR005746
TIGRFAM 74 171 98 TIGR01068 none thioredoxin: thioredoxin IPR005746

0 Localization

13 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran1_2004_QTL2_peak_Bud_burst_3P Qrob_Chr02 2 s_1AW12F_382 s_1A77MR_223 42 6 64 lod 3,6 9,6
Bourran_2000_2002_QTL2_Delta.F Qrob_Chr02 2 s_1CSO13_1244 s_1AVEUF_1540 55.44 46,71 63,68 lod 7.3232 0.058
Bourran2_2002_QTL7_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 29 52 lod 8,1 16
Bourran2_2002_QTL9_peak_Bud_burst_A4 Qrob_Chr02 2 s_1BFNDA_375 s_1A3VA1_2139 32,5 17 62 lod 3,1 4,2
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5
Bourran2_2015_nP_A4 Qrob_Chr02 2 s_1A0FUE_1868 s_1A1UAI_500 20,64 20,47 21,36 lod 5.8 10.9
Bourran2_2015_nPriLBD_A4 Qrob_Chr02 2 s_1CP5DI_1183 s_1A63ZX_1277 24,87 24,63 26,18 lod 3.8 7
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL6_d13Cf Qrob_Chr02 2 s_1AEP21_172 v_6048_204 46.33 22,5 65,23 lod 4.972 0.03
Bourran1_2004_QTL3_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 46 lod 2,9 6,4

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 93   Mitochondrion 4 0.038 0.707 NON-PLANT 93