Protein : Qrob_P0200400.2 Q. robur
Protein Identifier  ? Qrob_P0200400.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) 3.5.1.49 - Formamidase. Code Enzyme  EC:3.5.1.49
Gene Prediction Quality  validated Protein length 

Sequence

Length: 81  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides Catalysis of the hydrolysis of any non-peptide carbon-nitrogen bond in a linear amide.

22 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pmum:103336793 1 77 + 77 none 15.81 487 84.42 1e-38 putative formamidase C869.04
blastp_kegg lcl|pper:PRUPE_ppa005607mg 1 77 + 77 none 17.04 452 84.42 2e-38 hypothetical protein
blastp_kegg lcl|mdm:103431619 1 77 + 77 none 18.33 420 83.12 1e-37 putative formamidase C869.04
blastp_kegg lcl|mdm:103401494 1 77 + 77 none 18.33 420 83.12 1e-37 putative formamidase C869.04
blastp_kegg lcl|rcu:RCOM_0578730 1 77 + 77 none 17.04 452 81.82 2e-37 Acetamidase putative (EC:3.5.1.49)
blastp_kegg lcl|vvi:100255878 1 77 + 77 none 17.07 451 80.52 6e-37 putative formamidase C869.04-like
blastp_kegg lcl|pxb:103967744 1 77 + 77 none 17.04 452 81.82 1e-36 putative formamidase C869.04
blastp_kegg lcl|pop:POPTR_0005s18890g 1 77 + 77 none 17.07 451 80.52 9e-36 POPTRDRAFT_651135 POPTRDRAFT_818419 hypothetical protein
blastp_kegg lcl|tcc:TCM_000770 1 77 + 77 none 25.09 582 73.29 2e-35 Acetamidase/Formamidase family protein isoform 1
blastp_kegg lcl|pvu:PHAVU_003G236000g 1 77 + 77 none 17.07 451 71.43 6e-32 hypothetical protein
blastp_pdb 2wkn_H 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_pdb 2wkn_G 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_pdb 2wkn_F 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_pdb 2wkn_E 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_pdb 2wkn_D 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_pdb 2wkn_C 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_pdb 2wkn_B 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_pdb 2wkn_A 6 77 + 72 Gaps:1 17.36 409 36.62 3e-10 mol:protein length:409 FORMAMIDASE
blastp_uniprot_sprot sp|Q50228|FMDA_METME 7 77 + 71 none 17.44 407 46.48 1e-15 Formamidase OS Methylophilus methylotrophus GN fmdA PE 1 SV 1
blastp_uniprot_sprot sp|Q9URY7|FMDA_SCHPO 7 70 + 64 Gaps:1 15.37 410 49.21 6e-13 Putative formamidase C869.04 OS Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN SPAC869.04 PE 3 SV 1
blastp_uniprot_sprot sp|Q07838|AMDA_MYCSM 8 70 + 63 none 15.52 406 38.10 3e-09 Acetamidase OS Mycobacterium smegmatis GN amdA PE 1 SV 2
rpsblast_cdd gnl|CDD|202525 24 77 + 54 none 17.09 316 55.56 2e-11 pfam03069 FmdA_AmdA Acetamidase/Formamidase family. This family includes amidohydrolases of formamide EC:3.5.1.49 and acetamide. Methylophilus methylotrophus fmdA forms a homotrimer suggesting all the members of this family also do.

5 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 9 73 65 PF03069 none Acetamidase/Formamidase family IPR004304
SUPERFAMILY 24 59 36 SSF141130 none none none
PANTHER 2 68 67 PTHR31891:SF3 none none none
PANTHER 2 68 67 PTHR31891 none none none
Gene3D 10 66 57 G3DSA:2.60.120.580 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting