Protein : Qrob_P0200060.2 Q. robur
Protein Identifier  ? Qrob_P0200060.2 Organism . Name  Quercus robur
Score  29.8 Score Type  egn
Protein Description  (M=1) PTHR23315:SF7 - ANKYRIN-REPEAT-ARM DOMAIN PROTEIN Code Enzyme  EC:6.3.2.19
Gene Prediction Quality  validated Protein length 

Sequence

Length: 839  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0004842 ubiquitin-protein transferase activity Catalysis of the transfer of ubiquitin from one protein to another via the reaction X-Ub + Y --> Y-Ub + X, where both X-Ub and Y-Ub are covalent linkages.
GO:0016567 protein ubiquitination The process in which one or more ubiquitin groups are added to a protein.
GO:0005488 binding The selective, non-covalent, often stoichiometric, interaction of a molecule with one or more specific sites on another molecule.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_000733 1 838 + 838 Gaps:6 100.00 834 77.94 0.0 ATP synthase alpha/beta family protein isoform 1
blastp_kegg lcl|pmum:103337119 1 838 + 838 Gaps:2 99.29 844 75.78 0.0 U-box domain-containing protein 4
blastp_kegg lcl|cit:102619744 1 838 + 838 Gaps:12 99.28 834 76.21 0.0 U-box domain-containing protein 4-like
blastp_kegg lcl|cic:CICLE_v10024899mg 1 838 + 838 Gaps:12 100.00 828 76.45 0.0 hypothetical protein
blastp_kegg lcl|pxb:103928729 1 838 + 838 Gaps:4 100.00 836 74.28 0.0 U-box domain-containing protein 4-like
blastp_kegg lcl|pxb:103928719 1 838 + 838 Gaps:4 100.00 836 74.28 0.0 U-box domain-containing protein 4-like
blastp_kegg lcl|pop:POPTR_0007s10280g 1 837 + 837 Gaps:7 100.00 824 76.33 0.0 hypothetical protein
blastp_kegg lcl|pxb:103957422 1 838 + 838 Gaps:9 100.00 831 74.85 0.0 U-box domain-containing protein 4-like
blastp_kegg lcl|fve:101302105 1 838 + 838 Gaps:5 99.28 839 75.87 0.0 U-box domain-containing protein 4-like
blastp_kegg lcl|vvi:100257770 1 838 + 838 Gaps:33 100.00 809 76.14 0.0 U-box domain-containing protein 4-like
blastp_pdb 1t1h_A 236 309 + 74 none 94.87 78 60.81 8e-26 mol:protein length:78 armadillo repeat containing protein
blastp_pdb 2z6g_A 555 808 + 254 Gaps:38 42.95 780 34.03 8e-08 mol:protein length:780 B-catenin
blastp_pdb 2z6h_A 555 808 + 254 Gaps:19 40.53 644 27.59 1e-07 mol:protein length:644 Catenin beta-1
blastp_pdb 2gl7_D 555 808 + 254 Gaps:19 47.45 550 27.59 3e-07 mol:protein length:550 Beta-catenin
blastp_pdb 2gl7_A 555 808 + 254 Gaps:19 47.45 550 27.59 3e-07 mol:protein length:550 Beta-catenin
blastp_pdb 3oux_A 555 808 + 254 Gaps:19 48.33 540 27.59 4e-07 mol:protein length:540 Catenin beta-1
blastp_pdb 3ouw_A 555 808 + 254 Gaps:19 48.33 540 27.59 4e-07 mol:protein length:540 Catenin beta-1
blastp_pdb 1jpw_C 555 808 + 254 Gaps:19 48.33 540 27.59 5e-07 mol:protein length:540 BETA-CATENIN
blastp_pdb 1jpw_B 555 808 + 254 Gaps:19 48.33 540 27.59 5e-07 mol:protein length:540 BETA-CATENIN
blastp_pdb 1jpw_A 555 808 + 254 Gaps:19 48.33 540 27.59 5e-07 mol:protein length:540 BETA-CATENIN
blastp_uniprot_sprot sp|O22193|PUB4_ARATH 6 838 + 833 Gaps:11 100.00 826 64.29 0.0 U-box domain-containing protein 4 OS Arabidopsis thaliana GN PUB4 PE 1 SV 3
blastp_uniprot_sprot sp|Q5XEZ8|PUB2_ARATH 1 838 + 838 Gaps:6 91.65 707 59.26 4e-128 U-box domain-containing protein 2 OS Arabidopsis thaliana GN PUB2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8GWV5|PUB3_ARATH 6 838 + 833 Gaps:7 77.63 760 50.34 2e-105 U-box domain-containing protein 3 OS Arabidopsis thaliana GN PUB3 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SNC6|PUB13_ARATH 41 824 + 784 Gaps:95 90.15 660 44.71 1e-76 U-box domain-containing protein 13 OS Arabidopsis thaliana GN PUB13 PE 1 SV 1
blastp_uniprot_sprot sp|Q8GUG9|PUB11_ARATH 234 830 + 597 Gaps:4 60.78 612 51.61 1e-75 U-box domain-containing protein 11 OS Arabidopsis thaliana GN PUB11 PE 2 SV 2
blastp_uniprot_sprot sp|Q5VRH9|PUB12_ORYSJ 162 830 + 669 Gaps:19 70.54 611 52.44 2e-74 U-box domain-containing protein 12 OS Oryza sativa subsp. japonica GN PUB12 PE 2 SV 1
blastp_uniprot_sprot sp|Q9ZV31|PUB12_ARATH 46 827 + 782 Gaps:92 87.46 654 42.48 4e-71 U-box domain-containing protein 12 OS Arabidopsis thaliana GN PUB12 PE 2 SV 1
blastp_uniprot_sprot sp|Q8VZ40|PUB14_ARATH 41 830 + 790 Gaps:50 88.45 632 42.58 8e-71 U-box domain-containing protein 14 OS Arabidopsis thaliana GN PUB14 PE 1 SV 1
blastp_uniprot_sprot sp|Q9C9A6|PUB10_ARATH 234 830 + 597 Gaps:3 58.12 628 52.05 1e-70 U-box domain-containing protein 10 OS Arabidopsis thaliana GN PUB10 PE 2 SV 1
blastp_uniprot_sprot sp|Q0IMG9|SL11_ORYSJ 88 831 + 744 Gaps:83 77.81 694 44.44 4e-63 E3 ubiquitin-protein ligase SPL11 OS Oryza sativa subsp. japonica GN SPL11 PE 1 SV 2

27 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 522 835 314 PTHR23315 none none none
PANTHER 38 387 350 PTHR23315 none none none
Gene3D 235 307 73 G3DSA:3.30.40.10 none none IPR013083
SMART 789 829 41 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 584 624 41 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 747 787 41 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 707 746 40 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 625 665 41 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
SMART 666 706 41 SM00185 none Armadillo/beta-catenin-like repeats IPR000225
Pfam 586 623 38 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 668 705 38 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
Pfam 627 664 38 PF00514 none Armadillo/beta-catenin-like repeat IPR000225
PANTHER 472 505 34 PTHR23315 none none none
ProSiteProfiles 718 759 42 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
PANTHER 522 835 314 PTHR23315:SF7 none none none
SUPERFAMILY 555 827 273 SSF48371 none none IPR016024
Coils 179 210 32 Coil none none none
PANTHER 472 505 34 PTHR23315:SF7 none none none
PANTHER 38 387 350 PTHR23315:SF7 none none none
ProSiteProfiles 595 637 43 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
Pfam 236 306 71 PF04564 "UniPathway:UPA00143" U-box domain IPR003613
SUPERFAMILY 224 313 90 SSF57850 none none none
ProSiteProfiles 235 309 75 PS51698 "UniPathway:UPA00143" U-box domain profile. IPR003613
Gene3D 504 505 2 G3DSA:1.25.10.10 none none IPR011989
Gene3D 549 827 279 G3DSA:1.25.10.10 none none IPR011989
ProSiteProfiles 677 719 43 PS50176 none Armadillo/plakoglobin ARM repeat profile. IPR000225
SMART 239 302 64 SM00504 "UniPathway:UPA00143" Modified RING finger domain IPR003613

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nEpis*_A4 Qrob_Chr07 7 v_12400_446 s_1BPEBU_1211 6,93 0 15,13 lod 4,7411 11
Bourran2_2014_nLBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,41 9,8 50,1 lod 1,9524 4,1
Bourran2_2014_nPriBD_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,51 3,36 51,86 lod 1,6747 3,9
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5
Bourran2_2014_vEpiBC_A4 Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 37,55 14,41 50,01 lod 1,7882 4,8
Champenoux_2015_nEpis_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,53 25,47 27,72 lod 4.4 8.9

0 Targeting