Protein : Qrob_P0198210.2 Q. robur
Protein Identifier  ? Qrob_P0198210.2 Organism . Name  Quercus robur
Score  96.0 Score Type  egn
Protein Description  (M=8) K01177 - beta-amylase [EC:3.2.1.2] Code Enzyme  EC:3.2.1.2
Gene Prediction Quality  validated Protein length 

Sequence

Length: 340  
Kegg Orthology  K01177
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0000272 polysaccharide catabolic process The chemical reactions and pathways resulting in the breakdown of a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.
GO:0016161 beta-amylase activity Catalysis of the reaction: (1,4-alpha-D-glucosyl)(n+1) + H2O = (1,4-alpha-D-glucosyl)(n-1) + alpha-maltose. This reaction is the hydrolysis of 1,4-alpha-glucosidic linkages in polysaccharides so as to remove successive maltose units from the non-reducing ends of the chains.

37 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|gmx:100777004 16 324 + 309 none 47.25 654 84.14 0.0 beta-amylase 8-like
blastp_kegg lcl|cam:101496832 16 324 + 309 none 47.54 650 83.82 0.0 beta-amylase 8-like
blastp_kegg lcl|vvi:100254478 16 333 + 318 none 47.46 670 81.45 0.0 beta-amylase 8-like
blastp_kegg lcl|gmx:100816365 16 324 + 309 none 47.10 656 84.14 0.0 beta-amylase 8-like
blastp_kegg lcl|pvu:PHAVU_002G123700g 16 324 + 309 none 47.03 657 83.17 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_016719 16 324 + 309 none 46.05 671 82.20 0.0 Beta-amylase 2
blastp_kegg lcl|mtr:MTR_5g026210 16 324 + 309 none 47.54 650 81.88 0.0 Beta-amylase
blastp_kegg lcl|pop:POPTR_0003s10570g 16 328 + 313 none 44.65 701 81.15 0.0 POPTRDRAFT_852887 hypothetical protein
blastp_kegg lcl|cic:CICLE_v10000490mg 16 318 + 303 none 56.32 538 81.52 0.0 hypothetical protein
blastp_kegg lcl|cit:102616084 16 333 + 318 none 46.63 682 78.93 0.0 beta-amylase 8-like
blastp_pdb 1wdq_A 34 324 + 291 Gaps:3 58.99 495 47.60 4e-95 mol:protein length:495 Beta-amylase
blastp_pdb 1wdr_A 34 324 + 291 Gaps:3 58.99 495 47.60 4e-95 mol:protein length:495 Beta-amylase
blastp_pdb 1wdp_A 34 324 + 291 Gaps:3 58.99 495 47.60 4e-95 mol:protein length:495 Beta-amylase
blastp_pdb 1q6c_A 34 324 + 291 Gaps:3 58.99 495 47.60 4e-95 mol:protein length:495 beta-amylase
blastp_pdb 1bfn_A 34 324 + 291 Gaps:3 58.99 495 47.60 4e-95 mol:protein length:495 BETA-AMYLASE
blastp_pdb 1wds_A 34 324 + 291 Gaps:3 58.99 495 47.60 5e-95 mol:protein length:495 Beta-amylase
blastp_pdb 1q6g_A 34 324 + 291 Gaps:3 58.99 495 47.60 5e-95 mol:protein length:495 beta-amylase
blastp_pdb 1ukp_D 34 324 + 291 Gaps:3 58.99 495 47.60 5e-95 mol:protein length:495 Beta-amylase
blastp_pdb 1ukp_C 34 324 + 291 Gaps:3 58.99 495 47.60 5e-95 mol:protein length:495 Beta-amylase
blastp_pdb 1ukp_B 34 324 + 291 Gaps:3 58.99 495 47.60 5e-95 mol:protein length:495 Beta-amylase
blastp_uniprot_sprot sp|Q9FH80|BAM8_ARATH 16 324 + 309 Gaps:1 44.70 689 76.62 5e-172 Beta-amylase 8 OS Arabidopsis thaliana GN BAM8 PE 2 SV 1
blastp_uniprot_sprot sp|O80831|BAM7_ARATH 29 333 + 305 none 44.14 691 61.97 6e-137 Beta-amylase 7 OS Arabidopsis thaliana GN BAM7 PE 2 SV 2
blastp_uniprot_sprot sp|O65258|BAM2_ARATH 29 333 + 305 none 56.27 542 59.67 2e-131 Beta-amylase 2 chloroplastic OS Arabidopsis thaliana GN BAM2 PE 1 SV 2
blastp_uniprot_sprot sp|O22585|AMYB_MEDSA 34 324 + 291 Gaps:3 58.87 496 48.63 6e-96 Beta-amylase OS Medicago sativa GN BMY1 PE 1 SV 1
blastp_uniprot_sprot sp|P10538|AMYB_SOYBN 34 324 + 291 Gaps:3 58.87 496 47.60 4e-94 Beta-amylase OS Glycine max GN BMY1 PE 1 SV 3
blastp_uniprot_sprot sp|O64407|AMYB_VIGUN 34 324 + 291 Gaps:3 58.87 496 47.26 4e-92 Beta-amylase OS Vigna unguiculata GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|O65015|AMYB_TRIRP 34 324 + 291 Gaps:3 58.87 496 46.92 5e-92 Beta-amylase OS Trifolium repens GN BMY1 PE 2 SV 1
blastp_uniprot_sprot sp|P10537|AMYB_IPOBA 34 324 + 291 Gaps:2 58.72 499 46.42 5e-90 Beta-amylase OS Ipomoea batatas GN BMY1 PE 1 SV 4
blastp_uniprot_sprot sp|Q8L762|BAM6_ARATH 32 324 + 293 Gaps:4 51.13 577 49.83 5e-90 Beta-amylase 6 OS Arabidopsis thaliana GN BAM6 PE 2 SV 1
blastp_uniprot_sprot sp|P25853|BAM5_ARATH 34 322 + 289 Gaps:2 58.03 498 45.33 1e-88 Beta-amylase 5 OS Arabidopsis thaliana GN BAM5 PE 2 SV 1

11 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 31 331 301 G3DSA:3.20.20.80 none none IPR013781
SUPERFAMILY 29 329 301 SSF51445 none none IPR017853
PANTHER 20 324 305 PTHR31352:SF2 none none none
Pfam 55 326 272 PF01373 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Glycosyl hydrolase family 14 IPR001554
PRINTS 205 227 23 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 69 83 15 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 278 297 20 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 90 108 19 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 112 133 22 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PRINTS 312 328 17 PR00750 "KEGG:00500+3.2.1.2","MetaCyc:PWY-6724","MetaCyc:PWY-842" Beta-amylase (glycosyl hydrolase family 14) signature IPR001554
PANTHER 20 324 305 PTHR31352 none none none

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL17_peak_Bud_burst_A4 Qrob_Chr12 12 s_1CTJ3J_556 s_1CTJ3J_556 0 0 25 lod 2,9 6
Bourran2_2014_nSeqBC_3P Qrob_Chr12 12 s_1EO8V5_710 s_1A2VMU_355 11,04 0 32,58 lod 1,7196 4,7

0 Targeting