Protein : Qrob_P0196350.2 Q. robur
Protein Identifier  ? Qrob_P0196350.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PF07885//PF13202 - Ion channel // EF hand Gene Prediction Quality  validated
Protein length 

Sequence

Length: 359  
Kegg Orthology  K05389
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0016020 membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
GO:0005509 calcium ion binding Interacting selectively and non-covalently with calcium ions (Ca2+).
GO:0005774 vacuolar membrane The lipid bilayer surrounding the vacuole and separating its contents from the cytoplasm of the cell.
GO:0071805 potassium ion transmembrane transport A process in which a potassium ion is transported from one side of a membrane to the other.
GO:0005249 voltage-gated potassium channel activity Enables the transmembrane transfer of a potassium ion by a voltage-gated channel. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.
GO:0030007 cellular potassium ion homeostasis Any process involved in the maintenance of an internal steady state of potassium ions at the level of a cell.
GO:0005267 potassium channel activity Enables the selective, facilitated diffusion of a potassium ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.

31 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_004935 1 358 + 358 Gaps:29 98.71 388 75.20 0.0 Ca2+ activated outward rectifying K+ channel 5
blastp_kegg lcl|pxb:103953075 1 358 + 358 Gaps:43 90.48 441 70.18 0.0 two-pore potassium channel 5
blastp_kegg lcl|rcu:RCOM_1343610 1 358 + 358 Gaps:35 98.72 390 73.51 0.0 Calcium-activated outward-rectifying potassium channel putative
blastp_kegg lcl|cit:102627128 1 358 + 358 Gaps:29 98.71 388 71.02 0.0 two-pore potassium channel 5-like
blastp_kegg lcl|pxb:103933552 1 358 + 358 Gaps:45 98.76 404 69.92 0.0 two-pore potassium channel 5-like
blastp_kegg lcl|pop:POPTR_0014s10900g 17 358 + 342 Gaps:14 96.92 357 77.75 0.0 POPTRDRAFT_245387 hypothetical protein
blastp_kegg lcl|mdm:103405965 1 358 + 358 Gaps:46 98.77 405 69.50 0.0 two-pore potassium channel 5
blastp_kegg lcl|pper:PRUPE_ppa023309mg 40 358 + 319 Gaps:7 86.17 376 80.25 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0002s18870g 1 358 + 358 Gaps:18 98.68 379 72.19 0.0 POPTRDRAFT_755721 calcium-activated outward-rectifying potassium channel 5 family protein
blastp_kegg lcl|fve:101295947 1 358 + 358 Gaps:40 98.74 397 68.62 0.0 two-pore potassium channel 5-like
blastp_pdb 3tet_B 101 151 + 51 Gaps:4 56.70 97 40.00 3e-06 mol:protein length:97 Potassium channel protein
blastp_pdb 3tet_A 101 151 + 51 Gaps:4 56.70 97 40.00 3e-06 mol:protein length:97 Potassium channel protein
blastp_pdb 3vou_B 78 180 + 103 Gaps:15 60.81 148 35.56 7e-06 mol:protein length:148 Ion transport 2 domain protein Voltage-gated
blastp_pdb 3vou_A 78 180 + 103 Gaps:15 60.81 148 35.56 7e-06 mol:protein length:148 Ion transport 2 domain protein Voltage-gated
blastp_pdb 3ouf_B 101 151 + 51 Gaps:4 56.70 97 38.18 7e-06 mol:protein length:97 Potassium channel protein
blastp_pdb 3ouf_A 101 151 + 51 Gaps:4 56.70 97 38.18 7e-06 mol:protein length:97 Potassium channel protein
blastp_uniprot_sprot sp|Q9S6Z8|KCO5_ARATH 16 358 + 343 Gaps:5 84.80 408 66.47 3e-152 Two-pore potassium channel 5 OS Arabidopsis thaliana GN TPK5 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SVV6|KCO6_ARATH 41 358 + 318 Gaps:5 71.79 436 62.94 5e-130 Two-pore potassium channel 3 OS Arabidopsis thaliana GN TPK3 PE 2 SV 1
blastp_uniprot_sprot sp|Q69TN4|KCO3_ORYSJ 38 358 + 321 Gaps:15 71.49 456 57.67 3e-123 Two pore potassium channel c OS Oryza sativa subsp. japonica GN TPKC PE 3 SV 1
blastp_uniprot_sprot sp|Q9FL25|KCO2_ARATH 25 358 + 334 Gaps:14 75.40 443 57.78 5e-123 Two-pore potassium channel 2 OS Arabidopsis thaliana GN TPK2 PE 2 SV 1
blastp_uniprot_sprot sp|Q8LBL1|KCO1_ARATH 67 358 + 292 Gaps:6 78.79 363 41.61 4e-70 Two-pore potassium channel 1 OS Arabidopsis thaliana GN TPK1 PE 1 SV 2
blastp_uniprot_sprot sp|Q9FWX6|KCO4_ARATH 58 347 + 290 Gaps:29 91.90 284 47.89 2e-63 Two-pore potassium channel 4 OS Arabidopsis thaliana GN TPK4 PE 2 SV 2
blastp_uniprot_sprot sp|Q850M0|KCO1_ORYSJ 23 358 + 336 Gaps:10 94.52 347 37.20 4e-62 Two pore potassium channel a OS Oryza sativa subsp. japonica GN TPKA PE 1 SV 1
blastp_uniprot_sprot sp|Q8LIN5|KCO2_ORYSJ 16 358 + 343 Gaps:24 94.27 349 36.78 6e-59 Two pore potassium channel b OS Oryza sativa subsp. japonica GN TPKB PE 1 SV 1
blastp_uniprot_sprot sp|Q9XFR0|KCO3_ARATH 39 358 + 320 Gaps:52 92.69 260 49.38 5e-46 Potassium inward rectifier (Kir)-like channel 3 OS Arabidopsis thaliana GN KCO3 PE 1 SV 1
blastp_uniprot_sprot sp|P40310|TOK1_YEAST 101 264 + 164 Gaps:34 25.76 691 26.97 6e-11 Outward-rectifier potassium channel TOK1 OS Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN TOK1 PE 1 SV 1
rpsblast_cdd gnl|CDD|203792 81 278 + 198 Gaps:7 100.00 74 52.70 3e-11 pfam07885 Ion_trans_2 Ion channel. This family includes the two membrane helix type ion channels found in bacteria.
rpsblast_cdd gnl|CDD|182530 79 183 + 105 Gaps:4 25.70 393 28.71 6e-08 PRK10537 PRK10537 voltage-gated potassium channel Provisional.
rpsblast_kog gnl|CDD|36632 43 292 + 250 Gaps:22 64.67 433 25.36 1e-32 KOG1418 KOG1418 KOG1418 Tandem pore domain K+ channel [Inorganic ion transport and metabolism].
rpsblast_kog gnl|CDD|36633 81 166 + 86 Gaps:12 13.46 654 38.64 6e-10 KOG1419 KOG1419 KOG1419 Voltage-gated K+ channel KCNQ [Inorganic ion transport and metabolism].

29 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 126 136 11 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 203 224 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
ProSitePatterns 307 319 13 PS00018 none EF-hand calcium-binding domain. IPR018247
PRINTS 241 250 10 PR01333 none Two pore domain K+ channel signature IPR003280
PRINTS 118 146 29 PR01333 none Two pore domain K+ channel signature IPR003280
ProSiteProfiles 333 358 26 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Pfam 82 161 80 PF07885 none Ion channel IPR013099
Pfam 209 278 70 PF07885 none Ion channel IPR013099
Phobius 279 358 80 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Phobius 97 107 11 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 201 287 87 G3DSA:1.10.287.70 none none none
Phobius 108 125 18 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 257 278 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 137 162 26 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
PANTHER 70 358 289 PTHR11003 none none none
SUPERFAMILY 305 358 54 SSF47473 none none none
Phobius 163 202 40 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
ProSiteProfiles 307 329 23 PS50222 none EF-hand calcium-binding domain profile. IPR002048
Gene3D 305 356 52 G3DSA:1.10.238.10 none none IPR011992
SUPERFAMILY 194 302 109 SSF81324 none none none
Gene3D 78 161 84 G3DSA:1.10.287.70 none none none
Phobius 1 74 74 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
SUPERFAMILY 74 161 88 SSF81324 none none none
Pfam 302 319 18 PF13202 none EF hand IPR002048
Pfam 341 356 16 PF13202 none EF hand IPR002048
Phobius 75 96 22 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Phobius 225 256 32 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
ProSitePatterns 346 358 13 PS00018 none EF-hand calcium-binding domain. IPR018247
PANTHER 70 358 289 PTHR11003:SF88 none none IPR031144

5 Localization

Analysis Start End Length
TMHMM 74 96 22
TMHMM 203 225 22
TMHMM 109 131 22
TMHMM 256 278 22
TMHMM 141 162 21

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7

0 Targeting