Protein : Qrob_P0195040.2 Q. robur
Protein Identifier  ? Qrob_P0195040.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K05754 - actin related protein 2/3 complex, subunit 5 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 136  
Kegg Orthology  K05754
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005885 Arp2/3 protein complex A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments.
GO:0015629 actin cytoskeleton The part of the cytoskeleton (the internal framework of a cell) composed of actin and associated proteins. Includes actin cytoskeleton-associated complexes.
GO:0034314 Arp2/3 complex-mediated actin nucleation The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins.
GO:0030833 regulation of actin filament polymerization Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.

32 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_005690 1 135 + 135 none 100.00 135 92.59 7e-87 ARP2/3 complex 16 kDa subunit (p16-Arc) isoform 1
blastp_kegg lcl|cmo:103485501 1 135 + 135 none 100.00 135 92.59 1e-86 actin-related protein 2/3 complex subunit 5A
blastp_kegg lcl|cit:102611323 1 135 + 135 none 100.00 135 90.37 5e-86 actin-related protein 2/3 complex subunit 5A-like
blastp_kegg lcl|csv:101219310 1 135 + 135 none 100.00 135 92.59 7e-86 actin-related protein 2/3 complex subunit 5-like
blastp_kegg lcl|vvi:100252961 1 135 + 135 none 100.00 135 91.11 2e-85 actin-related protein 2/3 complex subunit 5-like
blastp_kegg lcl|pmum:103331595 1 135 + 135 none 100.00 135 91.11 2e-85 actin-related protein 2/3 complex subunit 5A
blastp_kegg lcl|pper:PRUPE_ppa013215mg 1 135 + 135 none 100.00 135 91.11 2e-85 hypothetical protein
blastp_kegg lcl|brp:103873959 1 135 + 135 none 100.00 135 88.15 5e-83 actin-related protein 2/3 complex subunit 5A
blastp_kegg lcl|eus:EUTSA_v10005116mg 1 135 + 135 none 100.00 135 87.41 7e-82 hypothetical protein
blastp_kegg lcl|pda:103717290 3 135 + 133 none 99.25 134 88.72 8e-82 actin-related protein 2/3 complex subunit 5A
blastp_pdb 3rse_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 3dxm_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 3dxk_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 2p9u_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 2p9s_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 2p9p_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 2p9n_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 2p9l_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 2p9k_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_pdb 2p9i_G 26 128 + 103 Gaps:2 69.54 151 32.38 3e-12 mol:protein length:151 Actin-related protein 2/3 complex subunit 5
blastp_uniprot_sprot sp|Q9M117|ARC5A_ARATH 7 135 + 129 none 97.73 132 89.92 2e-82 Actin-related protein 2/3 complex subunit 5A OS Arabidopsis thaliana GN ARPC5A PE 2 SV 2
blastp_uniprot_sprot sp|B3H6Y2|ARC5B_ARATH 1 135 + 135 none 100.00 135 82.22 2e-77 Actin-related protein 2/3 complex subunit 5B OS Arabidopsis thaliana GN ARPC5B PE 3 SV 1
blastp_uniprot_sprot sp|O96626|ARPC5_DICDI 20 130 + 111 Gaps:4 80.43 138 33.33 2e-12 Actin-related protein 2/3 complex subunit 5 OS Dictyostelium discoideum GN arcE PE 1 SV 1
blastp_uniprot_sprot sp|Q4KLF8|ARPC5_RAT 26 128 + 103 Gaps:2 69.54 151 32.38 6e-12 Actin-related protein 2/3 complex subunit 5 OS Rattus norvegicus GN Arpc5 PE 1 SV 3
blastp_uniprot_sprot sp|Q5R516|ARPC5_PONAB 26 128 + 103 Gaps:2 69.54 151 32.38 6e-12 Actin-related protein 2/3 complex subunit 5 OS Pongo abelii GN ARPC5 PE 2 SV 3
blastp_uniprot_sprot sp|O15511|ARPC5_HUMAN 26 128 + 103 Gaps:2 69.54 151 32.38 6e-12 Actin-related protein 2/3 complex subunit 5 OS Homo sapiens GN ARPC5 PE 1 SV 3
blastp_uniprot_sprot sp|Q9CPW4|ARPC5_MOUSE 26 128 + 103 Gaps:2 69.54 151 32.38 1e-11 Actin-related protein 2/3 complex subunit 5 OS Mus musculus GN Arpc5 PE 2 SV 3
blastp_uniprot_sprot sp|Q3SYX9|ARPC5_BOVIN 26 128 + 103 Gaps:2 69.54 151 32.38 1e-11 Actin-related protein 2/3 complex subunit 5 OS Bos taurus GN ARPC5 PE 1 SV 3
blastp_uniprot_sprot sp|Q5E963|ARP5L_BOVIN 26 128 + 103 Gaps:2 68.63 153 33.33 3e-11 Actin-related protein 2/3 complex subunit 5-like protein OS Bos taurus GN ARPC5L PE 2 SV 1
blastp_uniprot_sprot sp|Q5R4M1|ARP5L_PONAB 26 128 + 103 Gaps:2 68.63 153 33.33 4e-11 Actin-related protein 2/3 complex subunit 5-like protein OS Pongo abelii GN ARPC5L PE 2 SV 1

4 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
PANTHER 5 135 131 PTHR12644 none none IPR006789
Pfam 11 131 121 PF04699 none ARP2/3 complex 16 kDa subunit (p16-Arc) IPR006789
SUPERFAMILY 8 131 124 SSF69103 none none IPR006789
Gene3D 10 131 122 G3DSA:1.25.40.190 none none IPR006789

0 Localization

7 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_vSeqBC_3P Qrob_Chr10 10 s_1A6CK6_610 v_7092_29 4,28 0 23,27 lod 2,8619 7
Bourran2_2015_nEpis_3P Qrob_Chr12 12 s_1AOES6_1466 s_1B0DDG_1094 28,97 28,55 30,1 lod 3.6 8.4
Bourran2_2014_nFork*_3P Qrob_Chr06 6 v_12930_125 s_1AMZEI_909 34,28 7,43 41,48 lod 2,4044 5,5
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting