Protein : Qrob_P0193750.2 Q. robur
Protein Identifier  ? Qrob_P0193750.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=127) PF13947 - Wall-associated receptor kinase galacturonan-binding Gene Prediction Quality  validated
Protein length 

Sequence

Length: 224  
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0 Synonyms

1 GO Terms

Identifier Name Description
GO:0030247 polysaccharide binding Interacting selectively and non-covalently with any polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.

12 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa002917mg 5 165 + 161 Gaps:8 25.60 621 50.31 4e-36 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa001217mg 5 165 + 161 Gaps:13 29.12 879 44.92 1e-35 hypothetical protein
blastp_kegg lcl|pmum:103338769 5 165 + 161 Gaps:8 24.61 646 47.80 8e-33 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|pmum:103338834 5 165 + 161 Gaps:10 48.60 535 41.15 1e-31 uncharacterized LOC103338834
blastp_kegg lcl|mdm:103420410 5 181 + 177 Gaps:5 58.19 299 39.66 5e-31 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|mdm:103438227 2 152 + 151 Gaps:15 24.62 650 40.62 2e-29 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|pxb:103939061 20 152 + 133 Gaps:15 22.29 637 42.25 3e-28 probable receptor-like protein kinase At1g67000
blastp_kegg lcl|vvi:100261246 11 144 + 134 Gaps:29 19.51 1963 43.08 1e-27 uncharacterized LOC100261246
blastp_kegg lcl|pxb:103950630 6 158 + 153 Gaps:8 22.43 682 40.52 5e-27 probable serine/threonine-protein kinase At1g18390
blastp_kegg lcl|cit:102627673 5 140 + 136 Gaps:10 47.10 293 44.20 2e-26 probable receptor-like protein kinase At1g67000-like
blastp_uniprot_sprot sp|Q3ECH2|Y1670_ARATH 4 223 + 220 Gaps:28 33.74 892 32.89 4e-15 Probable receptor-like protein kinase At1g67000 OS Arabidopsis thaliana GN At1g67000 PE 2 SV 2
blastp_uniprot_sprot sp|P0C5E2|Y1839_ARATH 13 144 + 132 Gaps:4 19.88 654 31.54 7e-09 Probable serine/threonine-protein kinase At1g18390 OS Arabidopsis thaliana GN At1g18390 PE 2 SV 2

6 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Phobius 29 223 195 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Phobius 6 21 16 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 22 28 7 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 28 28 SIGNAL_PEPTIDE none Signal peptide region none
Pfam 35 141 107 PF13947 none Wall-associated receptor kinase galacturonan-binding IPR025287

3 Localization

Analysis Start End Length
SignalP_GRAM_POSITIVE 1 28 27
SignalP_EUK 1 26 25
TMHMM 7 29 22

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.961 0.022 NON-PLANT 26