Protein : Qrob_P0192740.2 Q. robur
Protein Identifier  ? Qrob_P0192740.2 Organism . Name  Quercus robur
Score  89.0 Score Type  egn
Protein Description  (M=1) K05864 - peptidyl-prolyl isomerase D (cyclophilin D) [EC:5.2.1.8] Code Enzyme  EC:5.2.1.8
Gene Prediction Quality  validated Protein length 

Sequence

Length: 420  
Kegg Orthology  K05864
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0006457 protein folding The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO:0000413 protein peptidyl-prolyl isomerization The modification of a protein by cis-trans isomerization of a proline residue.
GO:0003755 peptidyl-prolyl cis-trans isomerase activity Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).

50 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pop:POPTR_0005s14210g 1 344 + 344 none 95.29 361 89.24 0.0 POPTRDRAFT_801111 hypothetical protein
blastp_kegg lcl|tcc:TCM_000565 1 344 + 344 none 95.29 361 87.21 0.0 Peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase isoform 1
blastp_kegg lcl|cic:CICLE_v10028706mg 1 344 + 344 none 95.29 361 86.05 0.0 hypothetical protein
blastp_kegg lcl|cit:102610492 1 344 + 344 none 95.29 361 85.76 0.0 peptidyl-prolyl cis-trans isomerase CYP40-like
blastp_kegg lcl|pxb:103942080 1 344 + 344 none 95.03 362 85.17 0.0 peptidyl-prolyl cis-trans isomerase CYP40
blastp_kegg lcl|tcc:TCM_007003 1 344 + 344 none 91.49 376 84.88 0.0 Peptidyl-prolyl cis-trans isomerase / cyclophilin-40 (CYP40) / rotamase isoform 1
blastp_kegg lcl|rcu:RCOM_0774220 1 344 + 344 none 95.29 361 86.34 0.0 peptidyl-prolyl cis-trans isomerase d ppid putative (EC:5.2.1.8)
blastp_kegg lcl|atr:s00001p00273100 1 344 + 344 none 95.29 361 84.01 0.0 AMTR_s00001p00273100 hypothetical protein
blastp_kegg lcl|pop:POPTR_0009s10940g 1 344 + 344 none 92.97 370 82.85 0.0 POPTRDRAFT_804247 SQUINT family protein
blastp_kegg lcl|cmo:103495218 1 344 + 344 none 95.29 361 83.14 0.0 peptidyl-prolyl cis-trans isomerase CYP40-like
blastp_pdb 1iip_A 2 348 + 347 Gaps:7 92.97 370 51.74 1e-113 mol:protein length:370 Cyclophilin 40
blastp_pdb 1ihg_A 2 348 + 347 Gaps:7 92.97 370 51.74 1e-113 mol:protein length:370 Cyclophilin 40
blastp_pdb 2igw_A 1 173 + 173 Gaps:2 98.84 173 63.16 1e-70 mol:protein length:173 Peptidyl-prolyl cis-trans isomerase 3
blastp_pdb 2igv_A 1 173 + 173 Gaps:2 98.84 173 63.16 1e-70 mol:protein length:173 Peptidyl-prolyl cis-trans isomerase 3
blastp_pdb 1e8k_A 1 173 + 173 Gaps:2 98.84 173 63.16 1e-70 mol:protein length:173 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 3
blastp_pdb 1e3b_A 1 173 + 173 Gaps:2 98.84 173 63.16 1e-70 mol:protein length:173 CYCLOPHILIN 3
blastp_pdb 1dyw_A 1 173 + 173 Gaps:2 98.84 173 63.16 1e-70 mol:protein length:173 CYCLOPHILIN 3
blastp_pdb 2wfj_A 1 173 + 173 none 96.65 179 58.38 3e-66 mol:protein length:179 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE G
blastp_pdb 2wfi_A 1 173 + 173 none 96.65 179 58.38 3e-66 mol:protein length:179 PEPTIDYL-PROLYL CIS-TRANS ISOMERASE G
blastp_pdb 2hqj_A 1 173 + 173 Gaps:5 95.08 183 62.07 1e-65 mol:protein length:183 Cyclophilin
blastp_uniprot_sprot sp|Q9C566|CYP40_ARATH 1 344 + 344 none 95.29 361 79.65 0.0 Peptidyl-prolyl cis-trans isomerase CYP40 OS Arabidopsis thaliana GN CYP40 PE 2 SV 1
blastp_uniprot_sprot sp|Q6DGG0|PPID_RAT 3 343 + 341 Gaps:7 91.35 370 53.55 1e-114 Peptidyl-prolyl cis-trans isomerase D OS Rattus norvegicus GN Ppid PE 1 SV 3
blastp_uniprot_sprot sp|Q9CR16|PPID_MOUSE 3 343 + 341 Gaps:7 91.35 370 53.25 4e-114 Peptidyl-prolyl cis-trans isomerase D OS Mus musculus GN Ppid PE 1 SV 3
blastp_uniprot_sprot sp|P0C1I1|PPID_RHIO9 1 338 + 338 Gaps:17 93.68 364 55.13 1e-113 Peptidyl-prolyl cis-trans isomerase D OS Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) GN cyp12 PE 3 SV 1
blastp_uniprot_sprot sp|P26882|PPID_BOVIN 2 348 + 347 Gaps:7 92.97 370 51.74 5e-113 Peptidyl-prolyl cis-trans isomerase D OS Bos taurus GN PPID PE 1 SV 6
blastp_uniprot_sprot sp|Q08752|PPID_HUMAN 2 348 + 347 Gaps:7 92.97 370 51.74 2e-111 Peptidyl-prolyl cis-trans isomerase D OS Homo sapiens GN PPID PE 1 SV 3
blastp_uniprot_sprot sp|Q9P3X9|PPID_NEUCR 1 338 + 338 Gaps:14 91.73 375 50.58 6e-105 41 kDa peptidyl-prolyl cis-trans isomerase OS Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN cyp41 PE 1 SV 1
blastp_uniprot_sprot sp|Q4HXF6|PPID_GIBZE 2 338 + 337 Gaps:12 91.67 372 49.27 9e-100 Peptidyl-prolyl cis-trans isomerase D OS Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN CPR6 PE 3 SV 1
blastp_uniprot_sprot sp|Q6CBP4|PPID_YARLI 1 348 + 348 Gaps:24 97.00 367 46.35 1e-97 Peptidyl-prolyl cis-trans isomerase D OS Yarrowia lipolytica (strain CLIB 122 / E 150) GN CPR6 PE 3 SV 1
blastp_uniprot_sprot sp|Q5U8Z7|PPID_AMAMU 4 348 + 345 Gaps:23 95.42 371 47.18 4e-95 Peptidyl-prolyl cis-trans isomerase D OS Amanita muscaria GN Cyp40 PE 2 SV 1

22 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 210 343 134 SSF48452 none none none
Pfam 7 171 165 PF00160 none Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD IPR002130
ProSiteProfiles 7 172 166 PS50072 none Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. IPR002130
PANTHER 1 358 358 PTHR11071:SF78 none none none
SUPERFAMILY 2 175 174 SSF50891 none none IPR029000
PRINTS 61 73 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 132 147 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 104 119 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 119 131 13 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
PRINTS 24 39 16 PR00153 none Cyclophilin peptidyl-prolyl cis-trans isomerase signature IPR002130
ProSiteProfiles 264 331 68 PS50293 none TPR repeat region circular profile. IPR013026
PANTHER 1 358 358 PTHR11071 none none IPR024936
SMART 212 245 34 SM00028 none Tetratricopeptide repeats IPR019734
SMART 298 331 34 SM00028 none Tetratricopeptide repeats IPR019734
Phobius 408 419 12 CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm. none
Gene3D 212 344 133 G3DSA:1.25.40.10 none none IPR011990
ProSiteProfiles 212 245 34 PS50005 none TPR repeat profile. IPR019734
Gene3D 1 172 172 G3DSA:2.40.100.10 none none IPR029000
Phobius 1 382 382 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
Phobius 383 407 25 TRANSMEMBRANE none Region of a membrane-bound protein predicted to be embedded in the membrane. none
Pfam 299 330 32 PF13181 none Tetratricopeptide repeat IPR019734
ProSiteProfiles 298 331 34 PS50005 none TPR repeat profile. IPR019734

0 Localization

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nSecLBD_A4 Qrob_Chr07 7 v_8327_222 s_1A4WGY_363 16,04 0 44,69 lod 2,6373 6,5

0 Targeting