Protein : Qrob_P0189930.2 Q. robur
Protein Identifier  ? Qrob_P0189930.2 Organism . Name  Quercus robur
Protein Description  (M=82) PF00190 - Cupin Alias (in v1)  Qrob_P0206530.1
Gene Prediction Quality  manual_v1 Protein length 

Sequence

Length: 209  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa011467mg 1 207 + 207 Gaps:1 99.52 209 79.81 5e-114 hypothetical protein
blastp_kegg lcl|fve:101293627 1 207 + 207 Gaps:1 99.52 209 79.33 3e-113 auxin-binding protein ABP19a-like
blastp_kegg lcl|mdm:103400949 1 207 + 207 Gaps:1 89.27 233 78.85 7e-113 auxin-binding protein ABP20
blastp_kegg lcl|pmum:103340575 1 207 + 207 Gaps:1 99.52 209 79.33 8e-113 auxin-binding protein ABP19a
blastp_kegg lcl|vvi:100233095 1 207 + 207 none 99.52 208 79.23 5e-112 GER6 germin-like protein 6
blastp_kegg lcl|pxb:103951934 1 207 + 207 Gaps:1 99.52 209 79.33 5e-110 auxin-binding protein ABP19a
blastp_kegg lcl|fve:101293922 1 207 + 207 Gaps:1 99.52 209 77.88 4e-108 auxin-binding protein ABP19a-like
blastp_kegg lcl|pper:PRUPE_ppa011385mg 1 207 + 207 Gaps:1 98.11 212 76.92 2e-107 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa011460mg 1 207 + 207 Gaps:1 99.52 209 76.44 3e-107 hypothetical protein
blastp_kegg lcl|pop:POPTR_0006s14510g 1 208 + 208 Gaps:1 83.60 250 74.64 3e-106 hypothetical protein
blastp_pdb 2et7_A 19 206 + 188 Gaps:14 96.52 201 39.69 3e-35 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_B 19 206 + 188 Gaps:14 96.52 201 39.18 2e-34 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 19 206 + 188 Gaps:14 96.52 201 39.18 2e-34 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 19 206 + 188 Gaps:14 96.52 201 39.18 2e-34 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 19 206 + 188 Gaps:14 96.52 201 39.18 2e-34 mol:protein length:201 OXALATE OXIDASE
blastp_uniprot_sprot sp|Q9ZRA4|AB19A_PRUPE 1 207 + 207 Gaps:1 99.52 209 79.81 2e-115 Auxin-binding protein ABP19a OS Prunus persica GN ABP19A PE 3 SV 1
blastp_uniprot_sprot sp|O04012|AB19B_PRUPE 1 207 + 207 Gaps:1 99.52 209 76.92 1e-108 Auxin-binding protein ABP19b OS Prunus persica GN ABP19B PE 3 SV 1
blastp_uniprot_sprot sp|O04011|ABP20_PRUPE 1 207 + 207 Gaps:1 97.20 214 76.44 1e-108 Auxin-binding protein ABP20 OS Prunus persica GN ABP20 PE 2 SV 1
blastp_uniprot_sprot sp|P94072|GL33_ARATH 1 207 + 207 Gaps:1 98.58 211 69.71 3e-100 Germin-like protein subfamily 3 member 3 OS Arabidopsis thaliana GN GER3 PE 1 SV 1
blastp_uniprot_sprot sp|L8BRS3|GLP1_MORAL 16 208 + 193 none 92.34 209 72.02 8e-99 Germin-like protein OS Morus alba PE 1 SV 1
blastp_uniprot_sprot sp|P45854|GLP1_SINAL 1 207 + 207 Gaps:1 98.58 211 69.71 1e-98 Germin-like protein 1 OS Sinapis alba GN GLP1 PE 2 SV 1
blastp_uniprot_sprot sp|P94040|GL31_ARATH 16 208 + 193 none 92.79 208 69.95 4e-93 Germin-like protein subfamily 3 member 1 OS Arabidopsis thaliana GN GLP1 PE 1 SV 1
blastp_uniprot_sprot sp|P46271|GLP1_BRANA 18 208 + 191 Gaps:1 91.79 207 68.42 5e-87 Germin-like protein 1 OS Brassica napus GN GER1 PE 2 SV 1
blastp_uniprot_sprot sp|Q6ZBZ2|GL814_ORYSJ 17 208 + 192 Gaps:3 89.67 213 67.54 3e-84 Germin-like protein 8-14 OS Oryza sativa subsp. japonica GN GER5 PE 1 SV 1
blastp_uniprot_sprot sp|P45853|GLP1_IPONI 14 207 + 194 Gaps:3 91.12 214 58.46 1e-68 Germin-like protein OS Ipomoea nil GN GLP PE 2 SV 1
rpsblast_cdd gnl|CDD|197904 57 198 + 142 Gaps:4 98.63 146 36.11 2e-28 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 52 198 + 147 Gaps:14 100.00 139 34.53 6e-23 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 95 108 14 PS00725 none Germin family signature. IPR019780
Gene3D 18 202 185 G3DSA:2.60.120.10 none none IPR014710
Phobius 18 208 191 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none
PRINTS 130 150 21 PR00325 none Germin signature IPR001929
PRINTS 100 120 21 PR00325 none Germin signature IPR001929
PRINTS 163 178 16 PR00325 none Germin signature IPR001929
PANTHER 1 201 201 PTHR31238:SF2 none none none
Phobius 1 17 17 SIGNAL_PEPTIDE none Signal peptide region none
SUPERFAMILY 19 202 184 SSF51182 none none IPR011051
Phobius 1 1 1 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 57 196 140 PF00190 none Cupin IPR006045
PANTHER 1 201 201 PTHR31238 none none none
SMART 52 198 147 SM00835 none Cupin IPR006045
Phobius 2 12 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 13 17 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 17 16
SignalP_EUK 1 17 16
SignalP_GRAM_POSITIVE 1 17 16

1 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL5_d13Cf Qrob_Chr11 11 s_1BD29X_620 s_1A5BYY_1671 2.26 1,08 11,24 lod 5.8451 0.037

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 17   Secretory pathway 1 0.978 0.034 NON-PLANT 17