Protein : Qrob_P0188920.2 Q. robur
Protein Identifier  ? Qrob_P0188920.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) PTHR23421:SF67 - BETA-GALACTOSIDASE 10 (PTHR23421:SF67) Code Enzyme  EC:3.2.1.23
Gene Prediction Quality  validated Protein length 

Sequence

Length: 424  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0005975 carbohydrate metabolic process The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds Catalysis of the hydrolysis of any O-glycosyl bond.
GO:0030246 carbohydrate binding Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates.

23 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100254367 1 423 + 423 Gaps:3 50.30 847 75.59 0.0 beta-galactosidase 3-like
blastp_kegg lcl|tcc:TCM_001592 1 423 + 423 Gaps:3 50.30 847 76.29 0.0 Beta-galactosidase 3
blastp_kegg lcl|pper:PRUPE_ppa001345mg 1 423 + 423 Gaps:3 60.14 705 75.47 0.0 hypothetical protein
blastp_kegg lcl|pop:POPTR_0007s04740g 1 423 + 423 Gaps:8 50.06 841 76.01 0.0 POPTRDRAFT_802680 beta-galactosidase family protein
blastp_kegg lcl|csv:101210129 1 423 + 423 Gaps:2 50.12 844 73.52 0.0 beta-galactosidase 3-like
blastp_kegg lcl|pmum:103327087 1 423 + 423 Gaps:3 50.00 848 75.24 0.0 beta-galactosidase 10
blastp_kegg lcl|fve:101301252 12 423 + 412 Gaps:3 49.34 837 76.27 0.0 beta-galactosidase 10-like
blastp_kegg lcl|cmo:103499575 1 423 + 423 Gaps:2 50.18 843 72.10 0.0 beta-galactosidase 10
blastp_kegg lcl|pxb:103946788 1 423 + 423 Gaps:3 49.82 851 72.88 0.0 GAL3 beta-galactosidase 10
blastp_kegg lcl|mdm:103456279 1 423 + 423 Gaps:3 49.82 851 72.41 0.0 beta-galactosidase 10
blastp_uniprot_sprot sp|Q5N8X6|BGAL3_ORYSJ 1 423 + 423 Gaps:14 48.77 851 60.24 2e-173 Beta-galactosidase 3 OS Oryza sativa subsp. japonica GN Os01g0875500 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FN08|BGA10_ARATH 1 316 + 316 Gaps:11 41.97 741 71.06 2e-154 Beta-galactosidase 10 OS Arabidopsis thaliana GN BGAL10 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SCV9|BGAL3_ARATH 18 423 + 406 Gaps:9 47.78 856 45.23 2e-119 Beta-galactosidase 3 OS Arabidopsis thaliana GN BGAL3 PE 1 SV 1
blastp_uniprot_sprot sp|Q10RB4|BGAL5_ORYSJ 16 423 + 408 Gaps:8 48.75 841 43.66 5e-115 Beta-galactosidase 5 OS Oryza sativa subsp. japonica GN Os03g0165400 PE 2 SV 1
blastp_uniprot_sprot sp|Q9SCV4|BGAL8_ARATH 21 423 + 403 Gaps:15 47.42 852 46.53 2e-112 Beta-galactosidase 8 OS Arabidopsis thaliana GN BGAL8 PE 2 SV 2
blastp_uniprot_sprot sp|Q9SCW1|BGAL1_ARATH 20 423 + 404 Gaps:6 47.93 847 44.33 4e-112 Beta-galactosidase 1 OS Arabidopsis thaliana GN BGAL1 PE 1 SV 1
blastp_uniprot_sprot sp|P48980|BGAL_SOLLC 18 423 + 406 Gaps:6 48.86 835 43.14 3e-108 Beta-galactosidase OS Solanum lycopersicum PE 1 SV 1
blastp_uniprot_sprot sp|Q8W0A1|BGAL2_ORYSJ 20 422 + 403 Gaps:11 47.88 827 43.43 2e-106 Beta-galactosidase 2 OS Oryza sativa subsp. japonica GN Os01g0580200 PE 2 SV 1
blastp_uniprot_sprot sp|Q10NX8|BGAL6_ORYSJ 17 423 + 407 Gaps:8 47.44 858 44.72 2e-106 Beta-galactosidase 6 OS Oryza sativa subsp. japonica GN Os03g0255100 PE 1 SV 2
blastp_uniprot_sprot sp|P45582|BGAL_ASPOF 20 422 + 403 Gaps:14 48.20 832 43.64 4e-106 Beta-galactosidase OS Asparagus officinalis PE 2 SV 1
rpsblast_cdd gnl|CDD|166698 19 423 + 405 Gaps:6 48.45 840 44.72 1e-108 PLN03059 PLN03059 beta-galactosidase Provisional.
rpsblast_cdd gnl|CDD|202127 345 422 + 78 Gaps:5 100.00 79 46.84 4e-17 pfam02140 Gal_Lectin Galactose binding lectin domain.
rpsblast_kog gnl|CDD|35717 19 323 + 305 Gaps:56 38.67 649 47.01 8e-61 KOG0496 KOG0496 KOG0496 Beta-galactosidase [Carbohydrate transport and metabolism].

13 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 276 324 49 SSF49785 none none IPR008979
SUPERFAMILY 167 247 81 SSF49785 none none IPR008979
PANTHER 1 244 244 PTHR23421:SF67 none none none
Gene3D 43 126 84 G3DSA:2.60.120.260 none none IPR008979
PANTHER 271 337 67 PTHR23421:SF67 none none none
Pfam 345 422 78 PF02140 none Galactose binding lectin domain IPR000922
ProSiteProfiles 337 423 87 PS50228 none SUEL-type lectin domain profile. IPR000922
SUPERFAMILY 29 147 119 SSF49785 none none IPR008979
Gene3D 176 308 133 G3DSA:2.60.120.260 none none IPR008979
PRINTS 228 244 17 PR00742 "KEGG:00052+3.2.1.23","KEGG:00511+3.2.1.23","KEGG:00531+3.2.1.23","KEGG:00600+3.2.1.23","KEGG:00604+3.2.1.23","MetaCyc:PWY-6807" Glycosyl hydrolase family 35 signature IPR001944
PRINTS 201 215 15 PR00742 "KEGG:00052+3.2.1.23","KEGG:00511+3.2.1.23","KEGG:00531+3.2.1.23","KEGG:00600+3.2.1.23","KEGG:00604+3.2.1.23","MetaCyc:PWY-6807" Glycosyl hydrolase family 35 signature IPR001944
PANTHER 1 244 244 PTHR23421 "KEGG:00052+3.2.1.23","KEGG:00511+3.2.1.23","KEGG:00531+3.2.1.23","KEGG:00600+3.2.1.23","KEGG:00604+3.2.1.23","MetaCyc:PWY-6807";signature_desc=BETA-GALACTOSIDASE RELATED none IPR001944
PANTHER 271 337 67 PTHR23421 "KEGG:00052+3.2.1.23","KEGG:00511+3.2.1.23","KEGG:00531+3.2.1.23","KEGG:00600+3.2.1.23","KEGG:00604+3.2.1.23","MetaCyc:PWY-6807";signature_desc=BETA-GALACTOSIDASE RELATED none IPR001944

0 Localization

2 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2002_QTL13_peak_Bud_burst_3P Qrob_Chr10 10 s_1B1AG7_637 s_1A3A1N_709 19,44 0 49,44 lod 3 5,6
Champenoux_2015_nPriLBD_3P Qrob_Chr10 10 v_15000_157 v_15000_310 15,68 15,9 15,91 lod 2.4 5.5

0 Targeting