Protein : Qrob_P0188000.2 Q. robur
Protein Identifier  ? Qrob_P0188000.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=1) PTHR13822//PTHR13822:SF3 - ATP SYNTHASE DELTA/EPSILON CHAIN // SUBFAMILY NOT NAMED Code Enzyme  EC:3.6.3.14
Gene Prediction Quality  validated Protein length 

Sequence

Length: 175  
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0 Synonyms

7 GO Terms

Identifier Name Description
GO:0015991 ATP hydrolysis coupled proton transport The transport of protons against an electrochemical gradient, using energy from ATP hydrolysis.
GO:0016820 hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances Catalysis of the hydrolysis of an acid anhydride to directly drive the transport of a substance across a membrane.
GO:0046961 proton-transporting ATPase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out), by a rotational mechanism.
GO:0015986 ATP synthesis coupled proton transport The transport of protons across a membrane to generate an electrochemical gradient (proton-motive force) that powers ATP synthesis.
GO:0045261 proton-transporting ATP synthase complex, catalytic core F(1) The sector of a hydrogen-transporting ATP synthase complex in which the catalytic activity resides; it comprises the catalytic core and central stalk, and is peripherally associated with a membrane, such as the plasma membrane or the mitochondrial inner membrane, when the entire ATP synthase is assembled.
GO:0046933 proton-transporting ATP synthase activity, rotational mechanism Catalysis of the transfer of protons from one side of a membrane to the other according to the reaction: ADP + H2O + phosphate + H+(in) = ATP + H+(out), by a rotational mechanism.
GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.

42 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|aly:ARALYDRAFT_893992 1 173 + 173 Gaps:31 33.55 608 68.14 2e-82 H+-transporting two-sector ATPase alpha/beta subunit central region
blastp_kegg lcl|mtr:MTR_7g021780 1 174 + 174 Gaps:40 34.63 618 64.02 3e-78 ATP synthase subunit beta
blastp_kegg lcl|mtr:MTR_3g035730 1 174 + 174 Gaps:40 34.63 618 64.02 4e-78 ATP synthase subunit beta
blastp_kegg lcl|eus:EUTSA_v10011087mg 1 138 + 138 Gaps:17 29.19 531 70.32 7e-66 hypothetical protein
blastp_kegg lcl|mtr:MTR_4g051260 1 174 + 174 Gaps:54 33.11 604 62.50 1e-64 ATP synthase subunit beta
blastp_kegg lcl|gsl:Gasu_40560 1 174 + 174 Gaps:33 34.56 599 46.86 4e-51 [pt] F-type H+-transporting ATPase subunit beta (EC:3.6.3.14)
blastp_kegg lcl|tcc:ThcaC_p026 74 174 + 101 Gaps:14 86.47 133 71.30 8e-48 atpE ATP synthase CF1 epsilon subunit
blastp_kegg lcl|pmum:18668037 74 174 + 101 Gaps:14 86.47 133 70.43 1e-47 atpE CP95_p061 ATP synthase CF1 epsilon subunit
blastp_kegg lcl|atr:AmtrCp028 74 174 + 101 Gaps:14 85.82 134 69.57 5e-47 atpE ATP synthase epsilon chain
blastp_kegg lcl|pper:PrpeC_p027 74 174 + 101 Gaps:14 86.47 133 69.57 5e-47 atpE ATP synthase CF1 epsilon subunit
blastp_pdb 3oaa_D 1 73 + 73 none 15.90 459 71.23 2e-28 mol:protein length:459 ATP synthase subunit beta
blastp_pdb 1kmh_B 1 73 + 73 none 14.66 498 80.82 1e-32 mol:protein length:498 ATPase beta subunit
blastp_pdb 1fx0_B 1 73 + 73 none 14.66 498 80.82 1e-32 mol:protein length:498 ATP SYNTHASE BETA CHAIN
blastp_pdb 2rq7_A 66 174 + 109 Gaps:15 92.54 134 45.16 2e-31 mol:protein length:134 ATP synthase epsilon chain
blastp_pdb 3oaa_d 1 73 + 73 none 15.90 459 71.23 2e-28 mol:protein length:459 ATP synthase subunit beta
blastp_pdb 3oaa_c 1 73 + 73 none 15.90 459 71.23 2e-28 mol:protein length:459 ATP synthase subunit beta
blastp_pdb 3oaa_b 1 73 + 73 none 15.90 459 71.23 2e-28 mol:protein length:459 ATP synthase subunit beta
blastp_pdb 3oaa_V 1 73 + 73 none 15.90 459 71.23 2e-28 mol:protein length:459 ATP synthase subunit beta
blastp_pdb 3oaa_U 1 73 + 73 none 15.90 459 71.23 2e-28 mol:protein length:459 ATP synthase subunit beta
blastp_pdb 3oaa_T 1 73 + 73 none 15.90 459 71.23 2e-28 mol:protein length:459 ATP synthase subunit beta
blastp_uniprot_sprot sp|Q09X11|ATPE_MORIN 74 174 + 101 Gaps:14 86.47 133 73.91 7e-51 ATP synthase epsilon chain chloroplastic OS Morus indica GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|Q2L911|ATPE_GOSHI 74 174 + 101 Gaps:14 86.47 133 71.30 3e-49 ATP synthase epsilon chain chloroplastic OS Gossypium hirsutum GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|A0ZZ41|ATPE_GOSBA 74 174 + 101 Gaps:14 86.47 133 71.30 3e-49 ATP synthase epsilon chain chloroplastic OS Gossypium barbadense GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|Q9BBT9|ATPE_LOTJA 74 174 + 101 Gaps:14 86.47 133 70.43 4e-49 ATP synthase epsilon chain chloroplastic OS Lotus japonicus GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|Q0G9L3|ATPE_LIRTU 74 174 + 101 Gaps:14 85.82 134 69.57 8e-49 ATP synthase epsilon chain chloroplastic OS Liriodendron tulipifera GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|P07138|ATPE_IPOBA 74 174 + 101 Gaps:14 86.47 133 71.30 1e-48 ATP synthase epsilon chain chloroplastic OS Ipomoea batatas GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|Q6EW73|ATPE_NYMAL 74 174 + 101 Gaps:14 85.82 134 71.30 2e-48 ATP synthase epsilon chain chloroplastic OS Nymphaea alba GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|Q49KZ2|ATPE_EUCGG 74 174 + 101 Gaps:14 86.47 133 70.43 2e-48 ATP synthase epsilon chain chloroplastic OS Eucalyptus globulus subsp. globulus GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|Q1KXV3|ATPE_HELAN 74 174 + 101 Gaps:14 86.47 133 71.30 2e-48 ATP synthase epsilon chain chloroplastic OS Helianthus annuus GN atpE PE 3 SV 1
blastp_uniprot_sprot sp|Q70XZ7|ATPE_AMBTC 74 174 + 101 Gaps:14 85.82 134 69.57 2e-48 ATP synthase epsilon chain chloroplastic OS Amborella trichopoda GN atpE PE 3 SV 1

12 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Gene3D 2 73 72 G3DSA:1.10.1140.10 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR024034
TIGRFAM 71 168 98 TIGR01216 none ATP_synt_epsi: ATP synthase F1, epsilon subunit IPR001469
Pfam 66 135 70 PF02823 none ATP synthase, Delta/Epsilon chain, beta-sandwich domain IPR020546
ProDom 75 138 64 PD000944 none ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN IPR020546
Hamap 50 169 120 MF_00530 none ATP synthase epsilon chain [atpC]. IPR001469
Pfam 141 172 32 PF00401 none ATP synthase, Delta/Epsilon chain, long alpha-helix domain IPR020547
PANTHER 74 173 100 PTHR13822:SF3 none none none
SUPERFAMILY 73 136 64 SSF51344 none none IPR020546
Pfam 2 77 76 PF00306 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" ATP synthase alpha/beta chain, C terminal domain IPR000793
SUPERFAMILY 2 73 72 SSF47917 "KEGG:00190+3.6.3.14","KEGG:00195+3.6.3.14","MetaCyc:PWY-7219" none IPR000793
PANTHER 74 173 100 PTHR13822 none none IPR001469
Gene3D 74 137 64 G3DSA:2.60.15.10 none none IPR020546

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

0 Targeting