Protein : Qrob_P0187790.2 Q. robur
Protein Identifier  ? Qrob_P0187790.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=82) PF00190 - Cupin Gene Prediction Quality  validated
Protein length 

Sequence

Length: 226  
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0 Synonyms

2 GO Terms

Identifier Name Description
GO:0045735 nutrient reservoir activity Functions in the storage of nutritious substrates.
GO:0030145 manganese ion binding Interacting selectively and non-covalently with manganese (Mn) ions.

27 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|pper:PRUPE_ppa018105mg 2 225 + 224 Gaps:3 100.00 227 67.84 9e-101 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa016529mg 8 224 + 217 Gaps:2 96.90 226 69.86 1e-100 hypothetical protein
blastp_kegg lcl|pmum:103336253 2 224 + 223 Gaps:5 100.00 228 69.30 1e-100 germin-like protein subfamily 1 member 11
blastp_kegg lcl|sot:102584547 7 224 + 218 Gaps:5 97.81 228 68.16 5e-100 germin-like protein subfamily 1 member 20-like
blastp_kegg lcl|vvi:100242546 1 224 + 224 Gaps:1 100.00 225 65.78 6e-100 germin-like protein subfamily 1 member 13-like
blastp_kegg lcl|tcc:TCM_026075 7 221 + 215 Gaps:2 96.88 224 69.12 1e-99 RmlC-like cupins superfamily protein
blastp_kegg lcl|pper:PRUPE_ppa016284mg 2 224 + 223 Gaps:3 100.00 226 68.14 1e-99 hypothetical protein
blastp_kegg lcl|tcc:TCM_026097 7 224 + 218 Gaps:2 97.35 226 68.18 2e-99 RmlC-like cupins superfamily protein
blastp_kegg lcl|pper:PRUPE_ppa016753mg 2 224 + 223 Gaps:3 100.00 226 68.58 4e-99 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa020162mg 2 224 + 223 Gaps:3 100.00 226 68.58 6e-99 hypothetical protein
blastp_pdb 2et7_A 25 218 + 194 Gaps:5 97.01 201 44.62 8e-48 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2et1_A 25 218 + 194 Gaps:5 97.01 201 44.10 1e-46 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 1fi2_A 25 218 + 194 Gaps:5 97.01 201 44.10 1e-46 mol:protein length:201 OXALATE OXIDASE
blastp_pdb 2ete_B 25 218 + 194 Gaps:5 97.01 201 44.10 1e-46 mol:protein length:201 Oxalate oxidase 1
blastp_pdb 2ete_A 25 218 + 194 Gaps:5 97.01 201 44.10 1e-46 mol:protein length:201 Oxalate oxidase 1
blastp_uniprot_sprot sp|Q9SFF9|GL17_ARATH 7 218 + 212 Gaps:4 93.45 229 63.55 7e-87 Germin-like protein subfamily 1 member 7 OS Arabidopsis thaliana GN At3g05950 PE 2 SV 1
blastp_uniprot_sprot sp|P92997|GL113_ARATH 8 218 + 211 Gaps:2 95.95 222 59.62 1e-83 Germin-like protein subfamily 1 member 13 OS Arabidopsis thaliana GN GLP6 PE 2 SV 2
blastp_uniprot_sprot sp|Q9FIC8|GL116_ARATH 8 218 + 211 Gaps:3 95.50 222 58.96 4e-83 Germin-like protein subfamily 1 member 16 OS Arabidopsis thaliana GN At5g39130 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FIC6|GL117_ARATH 8 218 + 211 Gaps:5 95.02 221 60.95 7e-83 Germin-like protein subfamily 1 member 17 OS Arabidopsis thaliana GN At5g39150 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FID0|GL114_ARATH 8 218 + 211 Gaps:2 95.95 222 60.09 8e-83 Germin-like protein subfamily 1 member 14 OS Arabidopsis thaliana GN At5g39110 PE 3 SV 1
blastp_uniprot_sprot sp|Q9FIC9|GL115_ARATH 9 218 + 210 Gaps:6 97.74 221 58.80 9e-83 Germin-like protein subfamily 1 member 15 OS Arabidopsis thaliana GN At5g39120 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FL89|GL119_ARATH 8 218 + 211 Gaps:5 95.02 221 60.95 1e-82 Germin-like protein subfamily 1 member 19 OS Arabidopsis thaliana GN At5g39180 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FMA8|GL111_ARATH 25 221 + 197 Gaps:1 88.79 223 63.64 3e-82 Germin-like protein subfamily 1 member 11 OS Arabidopsis thaliana GN At5g38940 PE 2 SV 1
blastp_uniprot_sprot sp|Q9FMA9|GL110_ARATH 23 221 + 199 Gaps:1 89.69 223 63.50 4e-82 Germin-like protein subfamily 1 member 10 OS Arabidopsis thaliana GN At5g38930 PE 3 SV 1
blastp_uniprot_sprot sp|P92996|GL120_ARATH 8 218 + 211 Gaps:3 95.50 222 58.49 4e-82 Germin-like protein subfamily 1 member 20 OS Arabidopsis thaliana GN GLP5A PE 1 SV 1
rpsblast_cdd gnl|CDD|197904 69 213 + 145 Gaps:1 98.63 146 29.86 8e-26 smart00835 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.
rpsblast_cdd gnl|CDD|201069 65 213 + 149 Gaps:15 99.28 139 34.78 3e-25 pfam00190 Cupin_1 Cupin. This family represents the conserved barrel domain of the 'cupin' superfamily ('cupa' is the Latin term for a small barrel). This family contains 11S and 7S plant seed storage proteins and germins. Plant seed storage proteins provide the major nitrogen source for the developing plant.

15 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSitePatterns 107 120 14 PS00725 none Germin family signature. IPR019780
Phobius 19 23 5 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 23 23 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 2 224 223 PTHR31238:SF1 none none none
Gene3D 24 221 198 G3DSA:2.60.120.10 none none IPR014710
Phobius 1 7 7 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
Pfam 68 210 143 PF00190 none Cupin IPR006045
PANTHER 2 224 223 PTHR31238 none none none
PRINTS 143 163 21 PR00325 none Germin signature IPR001929
PRINTS 176 191 16 PR00325 none Germin signature IPR001929
PRINTS 112 132 21 PR00325 none Germin signature IPR001929
SUPERFAMILY 25 221 197 SSF51182 none none IPR011051
SMART 64 213 150 SM00835 none Cupin IPR006045
Phobius 8 18 11 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Phobius 24 225 202 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
SignalP_GRAM_NEGATIVE 1 23 22
SignalP_GRAM_POSITIVE 1 23 22
SignalP_EUK 1 23 22

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2015_nSeqBC_3P Qrob_Chr11 11 s_1DG9PM_867 s_1BZ083_1312 26,06 25,47 27,72 lod 3.6 7.1
Bourran2_2015_nP_3P Qrob_Chr12 12 v_10140_295 v_838_303 16 14,69 18,01 lod 5.1 13.7
Bourran1_2004_QTL4_peak_Bud_burst_3P Qrob_Chr04 4 s_1AHUWN_1101 s_1BRNG7_1618 30,55 0 47,55 lod 2,8 7,4
Bourran2_2002_QTL10_peak_Bud_burst_A4 Qrob_Chr04 4 s_1B59MJ_737 s_1BGLSD_999 15,86 0 41,66 lod 2,8 4
Bourran1_2000_QTL3_peak_Bud_burst_3P Qrob_Chr04 4 s_1A6DJQ_418 s_1A1PEC_1268 23,09 9,09 44,09 lod 2,3 6,8
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL7_d13Cf Qrob_Chr04 4 s_1B91MJ_705 s_1AHIKX_640 33.92 12,11 48,31 lod 6.1865 0.023

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 23   Secretory pathway 1 0.966 0.027 NON-PLANT 23