Protein : Qrob_P0187310.2 Q. robur
Protein Identifier  ? Qrob_P0187310.2 Organism . Name  Quercus robur
Score  100.0 Score Type  egn
Protein Description  (M=1) K17260 - actin-related protein 2 Gene Prediction Quality  validated
Protein length 

Sequence

Length: 390  
Kegg Orthology  K17260
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0 Synonyms

5 GO Terms

Identifier Name Description
GO:0005524 ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO:0005885 Arp2/3 protein complex A stable protein complex that contains two actin-related proteins, Arp2 and Arp3, and five novel proteins (ARPC1-5), and functions in the nucleation of branched actin filaments.
GO:0034314 Arp2/3 complex-mediated actin nucleation The actin nucleation process in which actin monomers combine to form a new branch on the side of an existing actin filament; mediated by the Arp2/3 protein complex and its interaction with other proteins.
GO:0005856 cytoskeleton Any of the various filamentous elements that form the internal framework of cells, and typically remain after treatment of the cells with mild detergent to remove membrane constituents and soluble components of the cytoplasm. The term embraces intermediate filaments, microfilaments, microtubules, the microtrabecular lattice, and other structures characterized by a polymeric filamentous nature and long-range order within the cell. The various elements of the cytoskeleton not only serve in the maintenance of cellular shape but also have roles in other cellular functions, including cellular movement, cell division, endocytosis, and movement of organelles.
GO:0007015 actin filament organization A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments. Includes processes that control the spatial distribution of actin filaments, such as organizing filaments into meshworks, bundles, or other structures, as by cross-linking.

46 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_017265 1 389 + 389 none 100.00 389 96.66 0.0 Actin related protein 2
blastp_kegg lcl|cmo:103485464 1 389 + 389 none 100.00 389 95.89 0.0 actin-related protein 2
blastp_kegg lcl|csv:101213341 1 389 + 389 none 100.00 389 95.37 0.0 actin-related protein 2-like
blastp_kegg lcl|rcu:RCOM_1447060 1 387 + 387 none 100.00 387 95.61 0.0 Actin putative
blastp_kegg lcl|pmum:103330305 1 389 + 389 none 100.00 389 94.86 0.0 actin-related protein 2
blastp_kegg lcl|vvi:100242912 1 389 + 389 none 100.00 389 95.12 0.0 actin-related protein 2-like
blastp_kegg lcl|pop:POPTR_0001s33420g 1 389 + 389 none 100.00 389 95.12 0.0 POPTRDRAFT_549729 WURM family protein
blastp_kegg lcl|pper:PRUPE_ppa006958mg 1 389 + 389 none 100.00 389 94.60 0.0 hypothetical protein
blastp_kegg lcl|pxb:103938505 1 389 + 389 none 100.00 389 94.60 0.0 actin-related protein 2-like
blastp_kegg lcl|pxb:103936112 1 389 + 389 none 100.00 389 94.34 0.0 actin-related protein 2
blastp_pdb 3rse_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-related protein 2
blastp_pdb 3dxm_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-related protein 2
blastp_pdb 3dxk_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-related protein 2
blastp_pdb 2p9u_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-like protein 2
blastp_pdb 2p9s_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-like protein 2
blastp_pdb 2p9p_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-like protein 2
blastp_pdb 2p9n_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-like protein 2
blastp_pdb 2p9l_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-like protein 2
blastp_pdb 2p9i_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-like protein 2
blastp_pdb 1u2v_B 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 mol:protein length:394 Actin-Related Protein 2
blastp_uniprot_sprot sp|Q9LSD6|ARP2_ARATH 1 389 + 389 none 100.00 389 92.03 0.0 Actin-related protein 2 OS Arabidopsis thaliana GN ARP2 PE 1 SV 1
blastp_uniprot_sprot sp|A2YUL5|ARP2_ORYSI 1 389 + 389 none 100.00 389 90.75 0.0 Actin-related protein 2 OS Oryza sativa subsp. indica GN ARP2 PE 3 SV 2
blastp_uniprot_sprot sp|Q6Z256|ARP2_ORYSJ 1 389 + 389 none 100.00 389 90.49 0.0 Actin-related protein 2 OS Oryza sativa subsp. japonica GN ARP2 PE 3 SV 1
blastp_uniprot_sprot sp|O96621|ARP2_DICDI 1 385 + 385 Gaps:1 98.47 392 64.77 0.0 Actin-related protein 2 OS Dictyostelium discoideum GN arpB PE 1 SV 1
blastp_uniprot_sprot sp|P53487|ARP2_ACACA 2 386 + 385 none 99.23 388 63.12 0.0 Actin-related protein 2 OS Acanthamoeba castellanii GN arp2 PE 2 SV 1
blastp_uniprot_sprot sp|P53488|ARP2_CHICK 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 Actin-related protein 2 OS Gallus gallus GN ACTR2 PE 2 SV 1
blastp_uniprot_sprot sp|Q5M7U6|ARP2_RAT 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 Actin-related protein 2 OS Rattus norvegicus GN Actr2 PE 1 SV 1
blastp_uniprot_sprot sp|P61161|ARP2_MOUSE 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 Actin-related protein 2 OS Mus musculus GN Actr2 PE 1 SV 1
blastp_uniprot_sprot sp|P61160|ARP2_HUMAN 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 Actin-related protein 2 OS Homo sapiens GN ACTR2 PE 1 SV 1
blastp_uniprot_sprot sp|A7MB62|ARP2_BOVIN 4 387 + 384 Gaps:1 97.72 394 63.64 0.0 Actin-related protein 2 OS Bos taurus GN ACTR2 PE 1 SV 1

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
Pfam 2 385 384 PF00022 none Actin IPR004000
PANTHER 1 385 385 PTHR11937:SF37 none none IPR027306
SUPERFAMILY 147 383 237 SSF53067 none none none
SMART 4 387 384 SM00268 none Actin IPR004000
Gene3D 187 257 71 G3DSA:3.90.640.10 none none none
PANTHER 1 385 385 PTHR11937 none none IPR004000
PRINTS 25 34 10 PR00190 none Actin signature IPR004000
PRINTS 116 129 14 PR00190 none Actin signature IPR004000
PRINTS 141 160 20 PR00190 none Actin signature IPR004000
PRINTS 62 84 23 PR00190 none Actin signature IPR004000
PRINTS 237 253 17 PR00190 none Actin signature IPR004000
Gene3D 2 186 185 G3DSA:3.30.420.40 none none none
SUPERFAMILY 2 154 153 SSF53067 none none none
Gene3D 258 383 126 G3DSA:3.30.420.40 none none none

0 Localization

5 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran1_2003_QTL2_peak_Bud_burst_A4 Qrob_Chr02 2 s_1B0H8U_259 s_1CB1VL_554 17 0 87 lod 3,3 8,7
Bourran2_2004_QTL9_peak_Bud_burst_3P Qrob_Chr02 2 s_1C34E9_788 v_12238_322 50 25 75 lod 4,4 10,1
NancyGreenhouseCO2_2001_ambient_elevated_leaf_cellulose_QTL2_d13Cf Qrob_Chr02 2 s_1AQA4Z_1644 s_1AK5QX_947 53.67 14,01 79,68 lod 5.6594 0.03
Bourran2_2003_QTL8_peak_Bud_burst_3P Qrob_Chr02 2 s_1ANG6_1446 v_11270_161 40 0 72 lod 4,4 9,9
Bourran2_2014_nP_A4 Qrob_Chr11 11 s_1B58GB_1413 s_1A5BYY_1671 11,15 0 42,38 lod 1,8913 4,5

0 Targeting