Protein : Qrob_P0186390.2 Q. robur
Protein Identifier  ? Qrob_P0186390.2 Organism . Name  Quercus robur
Protein Description  (M=2) PTHR18929:SF74 - PROTEIN DISULFIDE-ISOMERASE A3 (PTHR18929:SF74) Alias (in v1)  Qrob_P0337190.1
Code Enzyme  EC:5.3.4.1 Gene Prediction Quality  manual_v1
Protein length 

Sequence

Length: 510  
Kegg Orthology  K09580
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0045454 cell redox homeostasis Any process that maintains the redox environment of a cell or compartment within a cell.
GO:0005783 endoplasmic reticulum The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached).
GO:0016853 isomerase activity Catalysis of the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.

48 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|vvi:100259138 3 496 + 494 Gaps:1 99.20 499 78.99 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|cit:102609645 10 509 + 500 Gaps:8 98.80 500 77.13 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|rcu:RCOM_1030540 3 499 + 497 Gaps:9 99.00 498 78.50 0.0 protein disulfide isomerase putative (EC:2.4.1.119)
blastp_kegg lcl|pvu:PHAVU_009G126800g 3 508 + 506 Gaps:11 97.85 512 75.05 0.0 hypothetical protein
blastp_kegg lcl|pper:PRUPE_ppa004628mg 2 509 + 508 Gaps:14 99.40 499 77.02 0.0 hypothetical protein
blastp_kegg lcl|tcc:TCM_035146 1 496 + 496 Gaps:3 83.99 587 75.46 0.0 PDI-like 1-1 isoform 1
blastp_kegg lcl|pmum:103319805 2 509 + 508 Gaps:14 99.40 499 76.21 0.0 protein disulfide-isomerase
blastp_kegg lcl|gmx:100170705 2 492 + 491 Gaps:4 93.14 525 74.23 0.0 protein disulfide isomerase-like protein
blastp_kegg lcl|gmx:100788687 23 509 + 487 Gaps:5 95.83 503 75.52 0.0 protein disulfide-isomerase-like
blastp_kegg lcl|mdm:103441533 2 509 + 508 Gaps:14 99.20 500 74.80 0.0 protein disulfide-isomerase-like
blastp_pdb 3f8u_C 35 482 + 448 Gaps:40 94.80 481 37.72 1e-79 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3f8u_A 35 482 + 448 Gaps:40 94.80 481 37.72 1e-79 mol:protein length:481 Protein disulfide-isomerase A3ERp57
blastp_pdb 3boa_A 35 483 + 449 Gaps:49 89.29 504 32.44 9e-47 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 2b5e_A 35 483 + 449 Gaps:49 89.29 504 32.44 9e-47 mol:protein length:504 Protein disulfide-isomerase
blastp_pdb 3uem_A 32 481 + 450 Gaps:42 94.46 361 36.36 2e-39 mol:protein length:361 Protein disulfide-isomerase
blastp_pdb 2dmm_A 42 482 + 441 Gaps:11 94.37 142 61.94 2e-36 mol:protein length:142 Protein disulfide-isomerase A3
blastp_pdb 2dj2_A 31 480 + 450 Gaps:9 91.67 120 67.27 2e-35 mol:protein length:120 Protein disulfide-isomerase A4
blastp_pdb 3idv_A 28 480 + 453 Gaps:28 96.27 241 62.07 5e-34 mol:protein length:241 Protein disulfide-isomerase A4
blastp_pdb 1mek_A 30 483 + 454 Gaps:8 97.50 120 56.41 1e-32 mol:protein length:120 PROTEIN DISULFIDE ISOMERASE
blastp_pdb 2dj1_A 28 482 + 455 Gaps:6 81.43 140 57.02 6e-29 mol:protein length:140 Protein disulfide-isomerase A4
blastp_uniprot_sprot sp|Q43116|PDI_RICCO 3 499 + 497 Gaps:9 99.00 498 78.09 0.0 Protein disulfide-isomerase OS Ricinus communis PE 1 SV 1
blastp_uniprot_sprot sp|Q9XF61|PDI_DATGL 22 502 + 481 none 94.87 507 77.34 0.0 Protein disulfide-isomerase OS Datisca glomerata GN PDI PE 1 SV 1
blastp_uniprot_sprot sp|P29828|PDI_MEDSA 22 509 + 488 Gaps:5 96.29 512 71.60 0.0 Protein disulfide-isomerase OS Medicago sativa GN PDI PE 1 SV 1
blastp_uniprot_sprot sp|Q9XI01|PDI11_ARATH 8 485 + 478 Gaps:1 95.21 501 69.39 0.0 Protein disulfide isomerase-like 1-1 OS Arabidopsis thaliana GN PDIL1-1 PE 1 SV 1
blastp_uniprot_sprot sp|Q9SRG3|PDI12_ARATH 30 509 + 480 Gaps:5 95.08 508 66.67 0.0 Protein disulfide isomerase-like 1-2 OS Arabidopsis thaliana GN PDIL1-2 PE 2 SV 1
blastp_uniprot_sprot sp|Q53LQ0|PDI11_ORYSJ 35 509 + 475 Gaps:4 91.99 512 63.91 0.0 Protein disulfide isomerase-like 1-1 OS Oryza sativa subsp. japonica GN PDIL1-1 PE 2 SV 1
blastp_uniprot_sprot sp|P52588|PDI_MAIZE 35 485 + 451 Gaps:1 87.72 513 64.22 0.0 Protein disulfide-isomerase OS Zea mays GN PDI PE 2 SV 1
blastp_uniprot_sprot sp|P52589|PDI_WHEAT 35 485 + 451 Gaps:2 87.18 515 62.58 0.0 Protein disulfide-isomerase OS Triticum aestivum GN PDI PE 2 SV 1
blastp_uniprot_sprot sp|P80284|PDI_HORVU 35 485 + 451 Gaps:2 87.52 513 62.58 0.0 Protein disulfide-isomerase OS Hordeum vulgare GN PDI PE 1 SV 2
blastp_uniprot_sprot sp|Q7XRB5|PDI12_ORYSJ 11 509 + 499 Gaps:16 98.45 517 55.80 0.0 Protein disulfide isomerase-like 1-2 OS Oryza sativa subsp. japonica GN PDIL1-2 PE 2 SV 2

28 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
ProSiteProfiles 340 485 146 PS51352 none Thioredoxin domain profile. IPR012336
Gene3D 373 495 123 G3DSA:3.40.30.10 none none IPR012336
ProSitePatterns 399 417 19 PS00194 none Thioredoxin family active site. IPR017937
Phobius 6 17 12 SIGNAL_PEPTIDE_H_REGION none Hydrophobic region of a signal peptide. none
Gene3D 149 247 99 G3DSA:3.40.30.10 none none IPR012336
TIGRFAM 40 142 103 TIGR01126 none pdi_dom: protein disulfide-isomerase domain IPR005788
TIGRFAM 383 483 101 TIGR01126 none pdi_dom: protein disulfide-isomerase domain IPR005788
SUPERFAMILY 245 376 132 SSF52833 none none IPR012336
ProSiteProfiles 15 144 130 PS51352 none Thioredoxin domain profile. IPR012336
SUPERFAMILY 35 145 111 SSF52833 none none IPR012336
Pfam 171 355 185 PF13848 none Thioredoxin-like domain none
Phobius 18 26 9 SIGNAL_PEPTIDE_C_REGION none C-terminal region of a signal peptide. none
Phobius 1 5 5 SIGNAL_PEPTIDE_N_REGION none N-terminal region of a signal peptide. none
SUPERFAMILY 337 485 149 SSF52833 none none IPR012336
Gene3D 33 145 113 G3DSA:3.40.30.10 none none IPR012336
Phobius 1 26 26 SIGNAL_PEPTIDE none Signal peptide region none
PANTHER 1 499 499 PTHR18929:SF74 none none none
PANTHER 1 499 499 PTHR18929 none none none
SUPERFAMILY 148 247 100 SSF52833 none none IPR012336
PRINTS 61 70 10 PR00421 none Thioredoxin family signature none
PRINTS 53 61 9 PR00421 none Thioredoxin family signature none
PRINTS 106 117 12 PR00421 none Thioredoxin family signature none
ProSitePatterns 54 72 19 PS00194 none Thioredoxin family active site. IPR017937
Gene3D 260 361 102 G3DSA:3.40.30.10 none none IPR012336
Pfam 35 142 108 PF00085 none Thioredoxin IPR013766
Pfam 379 483 105 PF00085 none Thioredoxin IPR013766
TIGRFAM 35 509 475 TIGR01130 none ER_PDI_fam: protein disulfide isomerase IPR005792
Phobius 27 509 483 NON_CYTOPLASMIC_DOMAIN none Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. none

3 Localization

Analysis Start End Length
SignalP_EUK 1 19 18
SignalP_GRAM_NEGATIVE 1 19 18
SignalP_GRAM_POSITIVE 1 26 25

4 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2003_QTL11_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 4,16 48,16 lod 2,3 5,1
Bourran2_2004_QTL12_peak_Bud_burst_3P Qrob_Chr09 9 s_1BDO6G_250 s_1A83AM_496 34,31 9,31 44,31 lod 3,6 7,6
PM_1999_QTL15_peak_Bud_burst_3P Qrob_Chr09 9 s_1CGP2H_273 v_15801_330 27,16 9,16 47,16 lod 3,6 6,5
Bourran1_2003_QTL5_peak_Bud_burst_3P Qrob_Chr09 9 s_1ATM17_504 s_1AYZFM_899 29,81 19,81 41,81 lod 3,3 8,9

1 Targeting

Analysis Start End Length Location Reliability Signal Peptide Cut Off Mitochondrion Cut Off Network Signal Peptide Length
TargetP 1 26   Secretory pathway 1 0.939 0.060 NON-PLANT 26