Protein : Qrob_P0179070.2 Q. robur
Protein Identifier  ? Qrob_P0179070.2 Organism . Name  Quercus robur
Score  0.0 Score Type  egn
Protein Description  (M=18) PF03107 - C1 domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 558  
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0 Synonyms

4 GO Terms

Identifier Name Description
GO:0005515 protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
GO:0008270 zinc ion binding Interacting selectively and non-covalently with zinc (Zn) ions.
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0047134 protein-disulfide reductase activity Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_025246 1 554 + 554 Gaps:104 98.07 674 44.78 2e-124 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s05820g 4 554 + 551 Gaps:165 98.67 675 48.80 2e-120 POPTRDRAFT_576373 DC1 domain-containing family protein
blastp_kegg lcl|pper:PRUPE_ppa019516mg 31 551 + 521 Gaps:51 98.21 560 38.55 1e-108 hypothetical protein
blastp_kegg lcl|tcc:TCM_025071 7 554 + 548 Gaps:307 98.52 674 52.41 4e-103 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pvu:PHAVU_001G142800g 6 554 + 549 Gaps:85 92.73 564 43.59 5e-101 hypothetical protein
blastp_kegg lcl|tcc:TCM_025068 16 554 + 539 Gaps:171 98.36 670 47.19 4e-100 Cysteine/Histidine-rich C1 domain family protein putative isoform 1
blastp_kegg lcl|gmx:100810028 6 554 + 549 Gaps:84 92.77 567 43.35 4e-99 uncharacterized LOC100810028
blastp_kegg lcl|pmum:103339502 6 556 + 551 Gaps:326 99.65 1137 46.07 7e-99 uncharacterized LOC103339502
blastp_kegg lcl|pop:POPTR_0016s04640g 7 555 + 549 Gaps:193 98.43 701 41.16 5e-98 POPTRDRAFT_576246 hypothetical protein
blastp_kegg lcl|tcc:TCM_026405 17 554 + 538 Gaps:58 85.35 703 38.83 1e-96 Cysteine/Histidine-rich C1 domain family protein putative

18 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 315 398 84 SSF57889 none none none
SUPERFAMILY 9 53 45 SSF57889 none none none
SUPERFAMILY 105 187 83 SSF57889 none none none
Pfam 146 173 28 PF07649 none C1-like domain IPR011424
Pfam 94 121 28 PF07649 none C1-like domain IPR011424
Pfam 204 234 31 PF07649 none C1-like domain IPR011424
Pfam 305 331 27 PF07649 none C1-like domain IPR011424
Gene3D 300 336 37 G3DSA:3.30.60.20 none none none
Gene3D 94 126 33 G3DSA:3.30.60.20 none none none
SUPERFAMILY 177 236 60 SSF57889 none none none
SUPERFAMILY 510 555 46 SSF57889 none none none
SMART 30 99 70 SM00249 none PHD zinc finger IPR001965
SMART 147 226 80 SM00249 none PHD zinc finger IPR001965
SMART 465 546 82 SM00249 none PHD zinc finger IPR001965
SMART 304 363 60 SM00249 none PHD zinc finger IPR001965
PANTHER 11 512 502 PTHR32410 none none none
SUPERFAMILY 416 500 85 SSF57889 none none none
Pfam 357 385 29 PF03107 none C1 domain IPR004146

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting