Protein : Qrob_P0179020.2 Q. robur
Protein Identifier  ? Qrob_P0179020.2 Organism . Name  Quercus robur
Score  47.1 Score Type  egn
Protein Description  (M=18) PF03107 - C1 domain Gene Prediction Quality  validated
Protein length 

Sequence

Length: 563  
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0 Synonyms

3 GO Terms

Identifier Name Description
GO:0055114 oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.
GO:0047134 protein-disulfide reductase activity Catalysis of the reaction: protein-dithiol + NAD(P)+ = protein-disulfide + NAD(P)H + H+.
GO:0035556 intracellular signal transduction The process in which a signal is passed on to downstream components within the cell, which become activated themselves to further propagate the signal and finally trigger a change in the function or state of the cell.

10 Blast

Analysis Hit Start End Strand Length Note Hit Coverage Hit Length Hit Pident E Val Hit Description
blastp_kegg lcl|tcc:TCM_025246 2 560 + 559 Gaps:307 97.92 674 53.18 5e-112 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s05820g 4 559 + 556 Gaps:224 98.67 675 48.50 1e-103 POPTRDRAFT_576373 DC1 domain-containing family protein
blastp_kegg lcl|pper:PRUPE_ppa019516mg 28 556 + 529 Gaps:49 98.21 560 35.64 4e-98 hypothetical protein
blastp_kegg lcl|tcc:TCM_025068 28 561 + 534 Gaps:225 98.81 670 47.89 3e-96 Cysteine/Histidine-rich C1 domain family protein putative isoform 1
blastp_kegg lcl|tcc:TCM_024834 2 562 + 561 Gaps:255 98.80 1246 42.97 3e-95 hypothetical protein
blastp_kegg lcl|tcc:TCM_025071 4 561 + 558 Gaps:207 98.96 674 47.38 2e-93 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pvu:PHAVU_001G142800g 4 561 + 558 Gaps:60 93.97 564 36.04 7e-93 hypothetical protein
blastp_kegg lcl|gmx:100810028 3 561 + 559 Gaps:49 94.18 567 33.90 4e-90 uncharacterized LOC100810028
blastp_kegg lcl|tcc:TCM_026405 21 559 + 539 Gaps:211 92.03 703 42.50 6e-88 Cysteine/Histidine-rich C1 domain family protein putative
blastp_kegg lcl|pop:POPTR_0016s04640g 4 561 + 558 Gaps:213 98.57 701 41.39 7e-88 POPTRDRAFT_576246 hypothetical protein

14 Domain Motifs

Analysis Begin End Length Domain Identifier Cross Ref Description Inter Pro
SUPERFAMILY 514 560 47 SSF57889 none none none
Gene3D 147 181 35 G3DSA:3.30.40.10 none none IPR013083
Pfam 362 390 29 PF03107 none C1 domain IPR004146
PANTHER 19 545 527 PTHR32410 none none none
SUPERFAMILY 422 505 84 SSF57889 none none none
Gene3D 92 125 34 G3DSA:3.30.60.20 none none none
ProSiteProfiles 453 506 54 PS50081 none Zinc finger phorbol-ester/DAG-type profile. IPR002219
Pfam 146 176 31 PF07649 none C1-like domain IPR011424
Pfam 93 120 28 PF07649 none C1-like domain IPR011424
Pfam 307 334 28 PF07649 none C1-like domain IPR011424
Pfam 206 236 31 PF07649 none C1-like domain IPR011424
SUPERFAMILY 52 128 77 SSF57889 none none none
SUPERFAMILY 318 403 86 SSF57889 none none none
SUPERFAMILY 159 239 81 SSF57889 none none none

0 Localization

6 Qtllist

Qtl Name Chromosome Name Linkage Group Prox Marker Dist Marker Position QTL Pos One Pos Two Test Type Test Value R 2
Bourran2_2014_nLBD*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 34,91 16,12 53,62 lod 2,4961 5,2
Bourran2_2014_rEpiBC*_A4 Qrob_Chr08 8 v_12498_318 v_12364_308 35,77 14,11 55,31 lod 2,9413 6,2
Bourran_2000_2002_QTL6_Delta.F Qrob_Chr03 3 s_2HYXJ2_207 s_1AUAXK_317 29.12 6,3 45,37 lod 3.1666 0.026
Bourran2_2014_nLBD_3P Qrob_Chr03 3 s_1ET7H8_604 s_1BYNB5_834 23,73 0 46,72 lod 1,7573 3,8
PM_1999_QTL14_peak_Bud_burst_3P Qrob_Chr03 3 s_2F0SI1_756 v_6056_735 11,78 3,78 50,78 lod 2,5 4,5
Bourran2_2014_rEpiBC*_3P Qrob_Chr03 3 s_1A3B3X_1163 s_1DKGMO_450 23,04 4,92 41,12 lod 2,5668 7

0 Targeting